RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 RARAP10276 462 aa5.86□□□□□ -1.47
SCFD1-207ENST00000544052 TNNI2P48788 182 aa5.86□□□□□ -1.47
SCFD1-207ENST00000544052 KCNMA1Q12791 1236 aa5.86□□□□□ -1.47
SCFD1-207ENST00000544052 FIGNL1Q6PIW4 674 aa5.86□□□□□ -1.47
SCFD1-207ENST00000544052 CCDC155Q8N6L0 562 aa5.86□□□□□ -1.47
SCFD1-207ENST00000544052 GPR161Q8N6U8 529 aaKnown RBP5.86□□□□□ -1.47
SCFD1-207ENST00000544052 NANOS1Q8WY41 292 aaKnown RBP5.86□□□□□ -1.47
SCFD1-207ENST00000544052 ABHD17AQ96GS6 310 aa5.86□□□□□ -1.47
SCFD1-207ENST00000544052 CNTNAP3BQ96NU0 1288 aa5.86□□□□□ -1.47
SCFD1-207ENST00000544052 CNTNAP3Q9BZ76 1288 aa5.86□□□□□ -1.47
SCFD1-207ENST00000544052 FAM8A1Q9UBU6 413 aa5.86□□□□□ -1.47
SCFD1-207ENST00000544052 PPP1R1BQ9UD71 204 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-207ENST00000544052 USP31Q70CQ4 1352 aa5.86□□□□□ -1.47
SCFD1-207ENST00000544052 RACK1P63244 317 aaKnown RBP5.86□□□□□ -1.47
SCFD1-207ENST00000544052 KRT76Q01546 638 aa5.86□□□□□ -1.47
SCFD1-207ENST00000544052 SLC30A3Q99726 388 aa5.86□□□□□ -1.47
SCFD1-207ENST00000544052 C11orf16Q9NQ32 467 aa5.86□□□□□ -1.47
SCFD1-207ENST00000544052 ACPPP15309 386 aa5.85□□□□□ -1.47
SCFD1-207ENST00000544052 NFKB1P19838 968 aa5.85□□□□□ -1.47
SCFD1-207ENST00000544052 CD33P20138 364 aa5.85□□□□□ -1.47
SCFD1-207ENST00000544052 LBRQ14739 615 aaKnown RBP5.85□□□□□ -1.47
SCFD1-207ENST00000544052 TAF1CQ15572 869 aaPredicted RBP5.85□□□□□ -1.47
SCFD1-207ENST00000544052 COL13A1Q5TAT6 717 aaPredicted RBP5.85□□□□□ -1.47
SCFD1-207ENST00000544052 OR13H1Q8NG92 308 aa5.85□□□□□ -1.47
SCFD1-207ENST00000544052 SREK1Q8WXA9 508 aaKnown RBP5.85□□□□□ -1.47
SCFD1-207ENST00000544052 TGIF2Q9GZN2 237 aa5.85□□□□□ -1.47
SCFD1-207ENST00000544052 NDFIP2Q9NV92 336 aa5.85□□□□□ -1.47
SCFD1-207ENST00000544052 A0A1W2PP55 124 aa5.84□□□□□ -1.47
SCFD1-207ENST00000544052 GIPC1O14908 333 aa5.84□□□□□ -1.47
SCFD1-207ENST00000544052 TRPA1O75762 1119 aa5.84□□□□□ -1.47
SCFD1-207ENST00000544052 GLIS3Q8NEA6 775 aa5.84□□□□□ -1.47
SCFD1-207ENST00000544052 PMEPA1Q969W9 287 aa5.84□□□□□ -1.47
SCFD1-207ENST00000544052 DRC1Q96MC2 740 aa5.84□□□□□ -1.47
SCFD1-207ENST00000544052 PNMA5Q96PV4 448 aa5.84□□□□□ -1.47
SCFD1-207ENST00000544052 COL25A1Q9BXS0 654 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-207ENST00000544052 MARK1Q9P0L2 795 aa5.84□□□□□ -1.47
SCFD1-207ENST00000544052 SALL4Q9UJQ4 1053 aa5.84□□□□□ -1.47
SCFD1-207ENST00000544052 PHF20L1A8MW92 1017 aa5.84□□□□□ -1.47
SCFD1-207ENST00000544052 SPEM2Q0P670 501 aa5.84□□□□□ -1.47
SCFD1-207ENST00000544052 BHMTQ93088 406 aa5.84□□□□□ -1.47
SCFD1-207ENST00000544052 ZNF837Q96EG3 531 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-207ENST00000544052 TINF2Q9BSI4 451 aa5.84□□□□□ -1.47
SCFD1-207ENST00000544052 EHD4Q9H223 541 aa5.84□□□□□ -1.47
SCFD1-207ENST00000544052 SUV39H2Q9H5I1 410 aa5.84□□□□□ -1.47
SCFD1-207ENST00000544052 CCSER2Q9H7U1 834 aa5.84□□□□□ -1.47
SCFD1-207ENST00000544052 CAPN10Q9HC96 672 aa5.84□□□□□ -1.47
SCFD1-207ENST00000544052 GGT7Q9UJ14 662 aa5.84□□□□□ -1.47
SCFD1-207ENST00000544052 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-207ENST00000544052 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-207ENST00000544052 H7C1W4 665 aa5.83□□□□□ -1.48
SCFD1-207ENST00000544052 RNF225M0QZC1 329 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-207ENST00000544052 HS2ST1Q7LGA3 356 aa5.83□□□□□ -1.48
SCFD1-207ENST00000544052 USP48Q86UV5 1035 aa5.83□□□□□ -1.48
SCFD1-207ENST00000544052 TRIM22Q8IYM9 498 aa5.83□□□□□ -1.48
SCFD1-207ENST00000544052 GTPBP3Q969Y2 492 aaKnown RBP5.83□□□□□ -1.48
SCFD1-207ENST00000544052 NSUN5Q96P11 429 aaKnown RBP5.83□□□□□ -1.48
SCFD1-207ENST00000544052 SRCIN1Q9C0H9 1055 aa5.83□□□□□ -1.48
SCFD1-207ENST00000544052 DDX41Q9UJV9 622 aaKnown RBP5.83□□□□□ -1.48
SCFD1-207ENST00000544052 GPR25O00155 361 aa5.83□□□□□ -1.48
SCFD1-207ENST00000544052 EDN3P14138 238 aa5.83□□□□□ -1.48
SCFD1-207ENST00000544052 ITGA6P23229 1130 aa5.83□□□□□ -1.48
SCFD1-207ENST00000544052 KIAA0319Q5VV43 1072 aa5.83□□□□□ -1.48
SCFD1-207ENST00000544052 NCAPG2Q86XI2 1143 aa5.83□□□□□ -1.48
SCFD1-207ENST00000544052 C3orf58Q8NDZ4 430 aa5.83□□□□□ -1.48
SCFD1-207ENST00000544052 SRA1Q9HD15 236 aaKnown RBP5.83□□□□□ -1.48
SCFD1-207ENST00000544052 COPRSQ9NQ92 184 aa5.83□□□□□ -1.48
SCFD1-207ENST00000544052 SHROOM4Q9ULL8 1493 aa5.82□□□□□ -1.48
SCFD1-207ENST00000544052 F6X3S4 739 aa5.82□□□□□ -1.48
SCFD1-207ENST00000544052 FCGRTP55899 365 aa5.82□□□□□ -1.48
SCFD1-207ENST00000544052 SV2AQ7L0J3 742 aa5.82□□□□□ -1.48
SCFD1-207ENST00000544052 ZKSCAN3Q9BRR0 538 aa5.82□□□□□ -1.48
SCFD1-207ENST00000544052 TLR7Q9NYK1 1049 aaKnown RBP5.82□□□□□ -1.48
SCFD1-207ENST00000544052 ADAMTS8Q9UP79 889 aa5.82□□□□□ -1.48
SCFD1-207ENST00000544052 FBXO24O75426 580 aa5.81□□□□□ -1.48
SCFD1-207ENST00000544052 PSAPP07602 524 aa5.81□□□□□ -1.48
SCFD1-207ENST00000544052 GSK3AP49840 483 aa5.81□□□□□ -1.48
SCFD1-207ENST00000544052 PTPN12Q05209 780 aaKnown RBP5.81□□□□□ -1.48
SCFD1-207ENST00000544052 LAMC2Q13753 1193 aa5.81□□□□□ -1.48
SCFD1-207ENST00000544052 DHX32Q7L7V1 743 aaKnown RBP5.81□□□□□ -1.48
SCFD1-207ENST00000544052 VWA5B2Q8N398 1253 aa5.81□□□□□ -1.48
SCFD1-207ENST00000544052 TMEM151AQ8N4L1 468 aa5.81□□□□□ -1.48
SCFD1-207ENST00000544052 HHIPQ96QV1 700 aa5.81□□□□□ -1.48
SCFD1-207ENST00000544052 OSMRQ99650 979 aa5.81□□□□□ -1.48
SCFD1-207ENST00000544052 ABCB6Q9NP58 842 aa5.81□□□□□ -1.48
SCFD1-207ENST00000544052 CDC14CA4D256 554 aa5.81□□□□□ -1.48
SCFD1-207ENST00000544052 METTL12A8MUP2 240 aa5.81□□□□□ -1.48
SCFD1-207ENST00000544052 GSTT1P30711 240 aa5.81□□□□□ -1.48
SCFD1-207ENST00000544052 ST13P50502 369 aaKnown RBP5.81□□□□□ -1.48
SCFD1-207ENST00000544052 CTBSQ01459 385 aa5.81□□□□□ -1.48
SCFD1-207ENST00000544052 RNFT1Q5M7Z0 435 aa5.81□□□□□ -1.48
SCFD1-207ENST00000544052 ZNF385CQ66K41 422 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-207ENST00000544052 TCF12Q99081 682 aa5.81□□□□□ -1.48
SCFD1-207ENST00000544052 TRIM56Q9BRZ2 755 aaKnown RBP5.81□□□□□ -1.48
SCFD1-207ENST00000544052 IGFLR1Q9H665 355 aa5.81□□□□□ -1.48
SCFD1-207ENST00000544052 LIN7BQ9HAP6 207 aa5.81□□□□□ -1.48
SCFD1-207ENST00000544052 TTF2Q9UNY4 1162 aaKnown RBP5.81□□□□□ -1.48
SCFD1-207ENST00000544052 ZBTB42B2RXF5 422 aa5.8□□□□□ -1.48
SCFD1-207ENST00000544052 J3QW42 95 aa5.8□□□□□ -1.48
SCFD1-207ENST00000544052 SOX18P35713 384 aa5.8□□□□□ -1.48
SCFD1-207ENST00000544052 RASSF7Q02833 373 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 221.6 ms