RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 LDHAL6AQ6ZMR3 332 aa20.42■□□□□ 0.86
PTPRO-209ENST00000543886 XAGE2Q96GT9 111 aa20.42■□□□□ 0.86
PTPRO-209ENST00000543886 NGLY1Q96IV0 654 aa20.42■□□□□ 0.86
PTPRO-209ENST00000543886 ZSCAN31Q96LW9 406 aaPredicted RBP20.42■□□□□ 0.86
PTPRO-209ENST00000543886 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.42■□□□□ 0.86
PTPRO-209ENST00000543886 RIC1Q4ADV7 1423 aa20.42■□□□□ 0.86
PTPRO-209ENST00000543886 BRD1O95696 1058 aa20.42■□□□□ 0.86
PTPRO-209ENST00000543886 ITPK1Q13572 414 aa20.42■□□□□ 0.86
PTPRO-209ENST00000543886 USPL1Q5W0Q7 1092 aa20.42■□□□□ 0.86
PTPRO-209ENST00000543886 CCDC129Q6ZRS4 1044 aa20.42■□□□□ 0.86
PTPRO-209ENST00000543886 LARP6Q9BRS8 491 aaKnown RBP20.42■□□□□ 0.86
PTPRO-209ENST00000543886 HELLSQ9NRZ9 838 aa20.42■□□□□ 0.86
PTPRO-209ENST00000543886 U3KPZ7 1027 aaPredicted RBP20.42■□□□□ 0.86
PTPRO-209ENST00000543886 BLOC1S2Q6QNY1 142 aa20.41■□□□□ 0.86
PTPRO-209ENST00000543886 SEC62Q99442 399 aaKnown RBP20.41■□□□□ 0.86
PTPRO-209ENST00000543886 SH2B1Q9NRF2 756 aaPredicted RBP20.41■□□□□ 0.86
PTPRO-209ENST00000543886 CNNM1Q9NRU3 951 aa20.41■□□□□ 0.86
PTPRO-209ENST00000543886 ADORA1P30542 326 aa20.41■□□□□ 0.86
PTPRO-209ENST00000543886 KRT32Q14532 448 aa20.41■□□□□ 0.86
PTPRO-209ENST00000543886 VPS72Q15906 364 aa20.41■□□□□ 0.86
PTPRO-209ENST00000543886 FOXD4L5Q5VV16 416 aaPredicted RBP20.41■□□□□ 0.86
PTPRO-209ENST00000543886 FOXD4L4Q8WXT5 416 aaPredicted RBP20.41■□□□□ 0.86
PTPRO-209ENST00000543886 AK7Q96M32 723 aa20.41■□□□□ 0.86
PTPRO-209ENST00000543886 RIPOR2Q9Y4F9 1068 aa20.41■□□□□ 0.86
PTPRO-209ENST00000543886 GOLGA6L3A6NEY3 463 aa20.4■□□□□ 0.86
PTPRO-209ENST00000543886 CHGBP05060 677 aa20.4■□□□□ 0.86
PTPRO-209ENST00000543886 ATP2B3Q16720 1220 aa20.4■□□□□ 0.86
PTPRO-209ENST00000543886 LRRFIP1Q32MZ4 808 aaKnown RBP20.4■□□□□ 0.86
PTPRO-209ENST00000543886 TSGA10IPQ3SY00 556 aa20.4■□□□□ 0.86
PTPRO-209ENST00000543886 DDX49Q9Y6V7 483 aaKnown RBP20.39■□□□□ 0.86
PTPRO-209ENST00000543886 KCNQ2O43526 872 aa20.39■□□□□ 0.85
PTPRO-209ENST00000543886 FKBP4Q02790 459 aaKnown RBP eCLIP20.39■□□□□ 0.85
PTPRO-209ENST00000543886 ZMYM1Q5SVZ6 1142 aa20.39■□□□□ 0.85
PTPRO-209ENST00000543886 SMC3Q9UQE7 1217 aa20.39■□□□□ 0.85
PTPRO-209ENST00000543886 WDR33Q9C0J8 1336 aaKnown RBP20.39■□□□□ 0.85
PTPRO-209ENST00000543886 BCL9LQ86UU0 1499 aa20.39■□□□□ 0.85
PTPRO-209ENST00000543886 RNF113AO15541 343 aaKnown RBP20.38■□□□□ 0.85
PTPRO-209ENST00000543886 CAMTA2O94983 1202 aa20.38■□□□□ 0.85
PTPRO-209ENST00000543886 RPS6KB1P23443 525 aa20.38■□□□□ 0.85
PTPRO-209ENST00000543886 ANKRD1Q15327 319 aa20.38■□□□□ 0.85
PTPRO-209ENST00000543886 KLHL40Q2TBA0 621 aa20.38■□□□□ 0.85
PTPRO-209ENST00000543886 UTP14AQ9BVJ6 771 aaKnown RBP20.38■□□□□ 0.85
PTPRO-209ENST00000543886 ABCC12Q96J65 1359 aa20.38■□□□□ 0.85
PTPRO-209ENST00000543886 COL5A3P25940 1745 aaPredicted RBP20.38■□□□□ 0.85
PTPRO-209ENST00000543886 LARGE1O95461 756 aa20.38■□□□□ 0.85
PTPRO-209ENST00000543886 PARP10Q53GL7 1025 aa20.38■□□□□ 0.85
PTPRO-209ENST00000543886 SUSD4Q5VX71 490 aa20.38■□□□□ 0.85
PTPRO-209ENST00000543886 RTN4Q9NQC3 1192 aaKnown RBP20.38■□□□□ 0.85
PTPRO-209ENST00000543886 MYH14Q7Z406 1995 aaKnown RBP20.37■□□□□ 0.85
PTPRO-209ENST00000543886 CCDC83Q8IWF9 413 aa20.37■□□□□ 0.85
PTPRO-209ENST00000543886 LMBRD1Q9NUN5 540 aa20.37■□□□□ 0.85
PTPRO-209ENST00000543886 ZNF831Q5JPB2 1677 aa20.36■□□□□ 0.85
PTPRO-209ENST00000543886 TAF6LQ9Y6J9 622 aa20.36■□□□□ 0.85
PTPRO-209ENST00000543886 LRP5O75197 1615 aa20.36■□□□□ 0.85
PTPRO-209ENST00000543886 FSD2A1L4K1 749 aa20.36■□□□□ 0.85
PTPRO-209ENST00000543886 FAM177BA6PVY3 158 aa20.36■□□□□ 0.85
PTPRO-209ENST00000543886 ALDH8A1Q9H2A2 487 aaPredicted RBP20.36■□□□□ 0.85
PTPRO-209ENST00000543886 HSP90B1P14625 803 aaKnown RBP20.35■□□□□ 0.85
PTPRO-209ENST00000543886 DSCC1Q9BVC3 393 aa20.35■□□□□ 0.85
PTPRO-209ENST00000543886 ZNF652Q9Y2D9 606 aa20.35■□□□□ 0.85
PTPRO-209ENST00000543886 MAST3O60307 1309 aa20.35■□□□□ 0.85
PTPRO-209ENST00000543886 PRPF40AO75400 957 aaKnown RBP20.34■□□□□ 0.85
PTPRO-209ENST00000543886 ZFYP08048 801 aaPredicted RBP20.34■□□□□ 0.85
PTPRO-209ENST00000543886 HCLS1P14317 486 aaPredicted RBP20.34■□□□□ 0.85
PTPRO-209ENST00000543886 ME3Q16798 604 aa20.34■□□□□ 0.85
PTPRO-209ENST00000543886 SLFNL1Q499Z3 407 aa20.34■□□□□ 0.85
PTPRO-209ENST00000543886 TPCN1Q9ULQ1 816 aa20.34■□□□□ 0.85
PTPRO-209ENST00000543886 NIP7Q9Y221 180 aaKnown RBP eCLIP20.34■□□□□ 0.85
PTPRO-209ENST00000543886 VGLL2Q8N8G2 317 aa20.34■□□□□ 0.85
PTPRO-209ENST00000543886 NEK1Q96PY6 1258 aa20.34■□□□□ 0.85
PTPRO-209ENST00000543886 BRPF3Q9ULD4 1205 aa20.34■□□□□ 0.85
PTPRO-209ENST00000543886 ISY1Q9ULR0 285 aaKnown RBP20.34■□□□□ 0.85
PTPRO-209ENST00000543886 BCORQ6W2J9 1755 aa20.33■□□□□ 0.85
PTPRO-209ENST00000543886 MROH5Q6ZUA9 1318 aa20.33■□□□□ 0.85
PTPRO-209ENST00000543886 PDE8BO95263 885 aa20.33■□□□□ 0.85
PTPRO-209ENST00000543886 CYP21A2P08686 494 aa20.33■□□□□ 0.84
PTPRO-209ENST00000543886 SCARF1Q14162 830 aa20.33■□□□□ 0.84
PTPRO-209ENST00000543886 FNBP4Q8N3X1 1017 aaPredicted RBP20.33■□□□□ 0.84
PTPRO-209ENST00000543886 TCEANC2Q96MN5 208 aa20.33■□□□□ 0.84
PTPRO-209ENST00000543886 LAMB2P55268 1798 aa20.33■□□□□ 0.84
PTPRO-209ENST00000543886 DDX60Q8IY21 1712 aaKnown RBP20.32■□□□□ 0.84
PTPRO-209ENST00000543886 NCLP19338 710 aaKnown RBP20.32■□□□□ 0.84
PTPRO-209ENST00000543886 ZAP70P43403 619 aa20.32■□□□□ 0.84
PTPRO-209ENST00000543886 STX6O43752 255 aa20.31■□□□□ 0.84
PTPRO-209ENST00000543886 GJB2P29033 226 aa20.31■□□□□ 0.84
PTPRO-209ENST00000543886 COL9A3Q14050 684 aaPredicted RBP20.31■□□□□ 0.84
PTPRO-209ENST00000543886 PUM3Q15397 648 aaKnown RBP20.31■□□□□ 0.84
PTPRO-209ENST00000543886 CCDC152Q4G0S7 254 aa20.31■□□□□ 0.84
PTPRO-209ENST00000543886 CHAMP1Q96JM3 812 aa20.31■□□□□ 0.84
PTPRO-209ENST00000543886 ZNF512BQ96KM6 892 aaPredicted RBP20.31■□□□□ 0.84
PTPRO-209ENST00000543886 SPATA31A6Q5VVP1 1343 aa20.31■□□□□ 0.84
PTPRO-209ENST00000543886 M0R2C6 588 aa20.31■□□□□ 0.84
PTPRO-209ENST00000543886 HSPD1P10809 573 aaKnown RBP20.31■□□□□ 0.84
PTPRO-209ENST00000543886 SYT1P21579 422 aa20.31■□□□□ 0.84
PTPRO-209ENST00000543886 TOB2Q14106 344 aaPredicted RBP20.31■□□□□ 0.84
PTPRO-209ENST00000543886 WASHC4Q2M389 1173 aa20.31■□□□□ 0.84
PTPRO-209ENST00000543886 NECAB1Q8N987 351 aa20.31■□□□□ 0.84
PTPRO-209ENST00000543886 LINC00116Q8NCU8 138 aa20.31■□□□□ 0.84
PTPRO-209ENST00000543886 USP21Q9UK80 565 aa20.31■□□□□ 0.84
PTPRO-209ENST00000543886 MYH7P12883 1935 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms