RNA–Protein interactions for RNA: ENST00000543755.1

CD4-211, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 494 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-211ENST00000543755 ZBTB7BO15156 539 aaPredicted RBP11.72□□□□□ -0.53
CD4-211ENST00000543755 KCNQ3O43525 872 aa11.72□□□□□ -0.53
CD4-211ENST00000543755 PRAMEF18Q5VWM3 479 aa11.72□□□□□ -0.53
CD4-211ENST00000543755 SUSD4Q5VX71 490 aa11.72□□□□□ -0.53
CD4-211ENST00000543755 NBPF10Q6P3W6 841 aaKnown RBP11.72□□□□□ -0.53
CD4-211ENST00000543755 DDX46Q7L014 1031 aaKnown RBP11.72□□□□□ -0.53
CD4-211ENST00000543755 ARMC9Q7Z3E5 817 aa11.72□□□□□ -0.53
CD4-211ENST00000543755 TMC4Q7Z404 712 aa11.72□□□□□ -0.53
CD4-211ENST00000543755 STAP2Q9UGK3 403 aa11.72□□□□□ -0.53
CD4-211ENST00000543755 MAP3K15Q6ZN16 1313 aa11.71□□□□□ -0.53
CD4-211ENST00000543755 C6orf229H3BNL8 230 aa11.71□□□□□ -0.53
CD4-211ENST00000543755 RIMBP2O15034 1052 aa11.71□□□□□ -0.53
CD4-211ENST00000543755 SP3Q02447 781 aa11.71□□□□□ -0.53
CD4-211ENST00000543755 GPR153Q6NV75 609 aa11.71□□□□□ -0.53
CD4-211ENST00000543755 IFNL1Q8IU54 200 aa11.71□□□□□ -0.53
CD4-211ENST00000543755 EYA3Q99504 573 aa11.71□□□□□ -0.53
CD4-211ENST00000543755 SPTBN5Q9NRC6 3674 aaKnown RBP11.71□□□□□ -0.53
CD4-211ENST00000543755 VCANP13611 3396 aa11.71□□□□□ -0.54
CD4-211ENST00000543755 LAMA3Q16787 3333 aa11.7□□□□□ -0.54
CD4-211ENST00000543755 ECE2O60344 883 aa11.7□□□□□ -0.54
CD4-211ENST00000543755 PRKG1Q13976 671 aa11.7□□□□□ -0.54
CD4-211ENST00000543755 PARP10Q53GL7 1025 aa11.7□□□□□ -0.54
CD4-211ENST00000543755 SPRYD7Q5W111 196 aa11.7□□□□□ -0.54
CD4-211ENST00000543755 C3orf67Q6ZVT6 689 aa11.7□□□□□ -0.54
CD4-211ENST00000543755 SH3TC2Q8TF17 1288 aa11.7□□□□□ -0.54
CD4-211ENST00000543755 NECTIN2Q92692 538 aa11.7□□□□□ -0.54
CD4-211ENST00000543755 NSFL1CQ9UNZ2 370 aaKnown RBP11.7□□□□□ -0.54
CD4-211ENST00000543755 UBN2Q6ZU65 1347 aa11.69□□□□□ -0.54
CD4-211ENST00000543755 NTSR2O95665 410 aa11.69□□□□□ -0.54
CD4-211ENST00000543755 GRAPQ13588 217 aa11.69□□□□□ -0.54
CD4-211ENST00000543755 GRAPLQ8TC17 118 aaPredicted RBP11.69□□□□□ -0.54
CD4-211ENST00000543755 RPTORQ8N122 1335 aa11.68□□□□□ -0.54
CD4-211ENST00000543755 DIAPH1O60610 1272 aaKnown RBP11.68□□□□□ -0.54
CD4-211ENST00000543755 CAP1Q01518 475 aa11.68□□□□□ -0.54
CD4-211ENST00000543755 PTPN12Q05209 780 aaKnown RBP11.68□□□□□ -0.54
CD4-211ENST00000543755 CRHR2Q13324 411 aa11.68□□□□□ -0.54
CD4-211ENST00000543755 DOK7Q18PE1 504 aa11.68□□□□□ -0.54
CD4-211ENST00000543755 NKX2-3Q8TAU0 364 aa11.68□□□□□ -0.54
CD4-211ENST00000543755 SHISA4Q96DD7 197 aa11.68□□□□□ -0.54
CD4-211ENST00000543755 UTP14AQ9BVJ6 771 aaKnown RBP11.68□□□□□ -0.54
CD4-211ENST00000543755 ZBTB3Q9H5J0 574 aa11.68□□□□□ -0.54
CD4-211ENST00000543755 MYOZ2Q9NPC6 264 aa11.68□□□□□ -0.54
CD4-211ENST00000543755 SIPA1L3O60292 1781 aaPredicted RBP11.67□□□□□ -0.54
CD4-211ENST00000543755 TMEM265A0A087WTH1 108 aa11.67□□□□□ -0.54
CD4-211ENST00000543755 IGF2BP3O00425 579 aaKnown RBP eCLIP11.67□□□□□ -0.54
CD4-211ENST00000543755 EVI5O60447 810 aa11.67□□□□□ -0.54
CD4-211ENST00000543755 VIL1P09327 827 aaKnown RBP11.67□□□□□ -0.54
CD4-211ENST00000543755 HOXD11P31277 338 aaPredicted RBP11.67□□□□□ -0.54
CD4-211ENST00000543755 ZNF280AP59817 542 aaPredicted RBP11.67□□□□□ -0.54
CD4-211ENST00000543755 SLC10A5Q5PT55 438 aa11.67□□□□□ -0.54
CD4-211ENST00000543755 AGBL3Q8NEM8 1001 aa11.67□□□□□ -0.54
CD4-211ENST00000543755 SLC10A4Q96EP9 437 aa11.67□□□□□ -0.54
CD4-211ENST00000543755 ZC3H12CQ9C0D7 883 aaKnown RBP11.67□□□□□ -0.54
CD4-211ENST00000543755 KCNQ5Q9NR82 932 aa11.67□□□□□ -0.54
CD4-211ENST00000543755 RTL9Q8NET4 1388 aa11.67□□□□□ -0.54
CD4-211ENST00000543755 CEMIPQ8WUJ3 1361 aa11.67□□□□□ -0.54
CD4-211ENST00000543755 ECM2O94769 699 aaPredicted RBP11.66□□□□□ -0.54
CD4-211ENST00000543755 USP17L8P0C7I0 530 aa11.66□□□□□ -0.54
CD4-211ENST00000543755 ZBTB48P10074 688 aaPredicted RBP11.66□□□□□ -0.54
CD4-211ENST00000543755 ZNF34Q8IZ26 560 aa11.66□□□□□ -0.54
CD4-211ENST00000543755 RTF1Q92541 710 aaKnown RBP11.66□□□□□ -0.54
CD4-211ENST00000543755 PANK3Q9H999 370 aa11.66□□□□□ -0.54
CD4-211ENST00000543755 RRP7AQ9Y3A4 280 aaKnown RBP11.66□□□□□ -0.54
CD4-211ENST00000543755 RSBN1LQ6PCB5 846 aaPredicted RBP11.65□□□□□ -0.54
CD4-211ENST00000543755 ANGEL1Q9UNK9 670 aaKnown RBP11.65□□□□□ -0.54
CD4-211ENST00000543755 NUP98P52948 1817 aa11.65□□□□□ -0.55
CD4-211ENST00000543755 U2SURPO15042 1029 aaKnown RBP11.64□□□□□ -0.55
CD4-211ENST00000543755 MYL6BP14649 208 aa11.64□□□□□ -0.55
CD4-211ENST00000543755 BCAMP50895 628 aa11.64□□□□□ -0.55
CD4-211ENST00000543755 MTFR1Q15390 333 aa11.64□□□□□ -0.55
CD4-211ENST00000543755 GIGYF2Q6Y7W6 1299 aaKnown RBP11.64□□□□□ -0.55
CD4-211ENST00000543755 TTLL7Q6ZT98 887 aa11.64□□□□□ -0.55
CD4-211ENST00000543755 KNSTRNQ9Y448 316 aa11.64□□□□□ -0.55
CD4-211ENST00000543755 LAMB4A4D0S4 1761 aa11.64□□□□□ -0.55
CD4-211ENST00000543755 DDX60Q8IY21 1712 aaKnown RBP11.63□□□□□ -0.55
CD4-211ENST00000543755 IRS2Q9Y4H2 1338 aa11.63□□□□□ -0.55
CD4-211ENST00000543755 WDHD1O75717 1129 aaPredicted RBP11.63□□□□□ -0.55
CD4-211ENST00000543755 KIF22Q14807 665 aa11.63□□□□□ -0.55
CD4-211ENST00000543755 LDLRAD1Q5T700 205 aa11.63□□□□□ -0.55
CD4-211ENST00000543755 OGFOD1Q8N543 542 aa11.63□□□□□ -0.55
CD4-211ENST00000543755 SYMPKQ92797 1274 aaKnown RBP11.63□□□□□ -0.55
CD4-211ENST00000543755 FAM161BQ96MY7 647 aa11.63□□□□□ -0.55
CD4-211ENST00000543755 DUOX1Q9NRD9 1551 aa11.62□□□□□ -0.55
CD4-211ENST00000543755 FARP2O94887 1054 aaPredicted RBP11.62□□□□□ -0.55
CD4-211ENST00000543755 HCLS1P14317 486 aaPredicted RBP11.62□□□□□ -0.55
CD4-211ENST00000543755 WNK4Q96J92 1243 aa11.62□□□□□ -0.55
CD4-211ENST00000543755 POLLQ9UGP5 575 aa11.62□□□□□ -0.55
CD4-211ENST00000543755 TNFRSF10AO00220 468 aa11.61□□□□□ -0.55
CD4-211ENST00000543755 PPP1R12BO60237 982 aaPredicted RBP11.61□□□□□ -0.55
CD4-211ENST00000543755 LRIT3Q3SXY7 679 aa11.61□□□□□ -0.55
CD4-211ENST00000543755 FZD1Q9UP38 647 aa11.61□□□□□ -0.55
CD4-211ENST00000543755 KDM3BQ7LBC6 1761 aa11.6□□□□□ -0.55
CD4-211ENST00000543755 GPSM2P81274 684 aa11.6□□□□□ -0.55
CD4-211ENST00000543755 NBPF9Q3BBW0 867 aa11.6□□□□□ -0.55
CD4-211ENST00000543755 UBE2Q1Q7Z7E8 422 aa11.6□□□□□ -0.55
CD4-211ENST00000543755 APOBEC3FQ8IUX4 373 aaKnown RBP11.6□□□□□ -0.55
CD4-211ENST00000543755 GUCD1Q96NT3 240 aa11.6□□□□□ -0.55
CD4-211ENST00000543755 ZFYVE28Q9HCC9 887 aa11.6□□□□□ -0.55
CD4-211ENST00000543755 TRMT112Q9UI30 125 aaKnown RBP11.6□□□□□ -0.55
CD4-211ENST00000543755 SH3TC1Q8TE82 1336 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms