RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, human

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-222	ENST00000543695	PTPN12	Q05209	780 aa	Known RBP	13.55	□□□□□ -0.24
LDHA-222	ENST00000543695	USPL1	Q5W0Q7	1092 aa		13.55	□□□□□ -0.24
LDHA-222	ENST00000543695	UBE3B	Q7Z3V4	1068 aa		13.55	□□□□□ -0.24
LDHA-222	ENST00000543695	ZGPAT	Q8N5A5	531 aa	Known RBP	13.55	□□□□□ -0.24
LDHA-222	ENST00000543695	CWC25	Q9NXE8	425 aa	Predicted RBP	13.55	□□□□□ -0.24
LDHA-222	ENST00000543695	NARF	Q9UHQ1	456 aa		13.55	□□□□□ -0.24
LDHA-222	ENST00000543695	ZBTB1	Q9Y2K1	713 aa		13.55	□□□□□ -0.24
LDHA-222	ENST00000543695	NUP98	P52948	1817 aa		13.55	□□□□□ -0.24
LDHA-222	ENST00000543695	TM4SF1	P30408	202 aa		13.54	□□□□□ -0.24
LDHA-222	ENST00000543695	PIP4K2A	P48426	406 aa	Predicted RBP	13.54	□□□□□ -0.24
LDHA-222	ENST00000543695	CWC27	Q6UX04	472 aa	Known RBP	13.54	□□□□□ -0.24
LDHA-222	ENST00000543695	CCDC191	Q8NCU4	936 aa		13.54	□□□□□ -0.24
LDHA-222	ENST00000543695	TTC14	Q96N46	770 aa		13.54	□□□□□ -0.24
LDHA-222	ENST00000543695	TM6SF1	Q9BZW5	370 aa		13.54	□□□□□ -0.24
LDHA-222	ENST00000543695	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.54	□□□□□ -0.24
LDHA-222	ENST00000543695	MYH7	P12883	1935 aa		13.54	□□□□□ -0.24
LDHA-222	ENST00000543695	LAMA4	Q16363	1823 aa		13.53	□□□□□ -0.24
LDHA-222	ENST00000543695	ATP5J	P18859	108 aa		13.53	□□□□□ -0.24
LDHA-222	ENST00000543695	FOXO4	P98177	505 aa		13.53	□□□□□ -0.24
LDHA-222	ENST00000543695	DDR1	Q08345	913 aa		13.53	□□□□□ -0.24
LDHA-222	ENST00000543695	TNNI3K	Q59H18	835 aa		13.53	□□□□□ -0.24
LDHA-222	ENST00000543695	TICAM2	Q86XR7	235 aa		13.53	□□□□□ -0.24
LDHA-222	ENST00000543695	SIL1	Q9H173	461 aa		13.53	□□□□□ -0.24
LDHA-222	ENST00000543695	RNF39	Q9H2S5	420 aa		13.53	□□□□□ -0.24
LDHA-222	ENST00000543695	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.53	□□□□□ -0.24
LDHA-222	ENST00000543695	GPR108	Q9NPR9	543 aa		13.53	□□□□□ -0.24
LDHA-222	ENST00000543695	PIM2	Q9P1W9	311 aa		13.53	□□□□□ -0.24
LDHA-222	ENST00000543695	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.53	□□□□□ -0.24
LDHA-222	ENST00000543695	FPGT-TNNI3K	V9GXZ4	949 aa		13.53	□□□□□ -0.24
LDHA-222	ENST00000543695	CCDC171	Q6TFL3	1326 aa		13.53	□□□□□ -0.24
LDHA-222	ENST00000543695	C10orf71	Q711Q0	1435 aa		13.53	□□□□□ -0.24
LDHA-222	ENST00000543695	CIC	Q96RK0	1608 aa	Predicted RBP	13.53	□□□□□ -0.24
LDHA-222	ENST00000543695	TCHH	Q07283	1943 aa		13.52	□□□□□ -0.24
LDHA-222	ENST00000543695	ATP5J2-PTCD1	G3V325	749 aa		13.52	□□□□□ -0.25
LDHA-222	ENST00000543695	POLRMT	O00411	1230 aa	Known RBP	13.52	□□□□□ -0.25
LDHA-222	ENST00000543695	KLHL40	Q2TBA0	621 aa		13.52	□□□□□ -0.25
LDHA-222	ENST00000543695	TTLL7	Q6ZT98	887 aa		13.52	□□□□□ -0.25
LDHA-222	ENST00000543695	ARHGAP27	Q6ZUM4	889 aa		13.52	□□□□□ -0.25
LDHA-222	ENST00000543695	TLR7	Q9NYK1	1049 aa	Known RBP	13.52	□□□□□ -0.25
LDHA-222	ENST00000543695	ZDHHC9	Q9Y397	364 aa		13.52	□□□□□ -0.25
LDHA-222	ENST00000543695	MED23	Q9ULK4	1368 aa		13.52	□□□□□ -0.25
LDHA-222	ENST00000543695	MYH14	Q7Z406	1995 aa	Known RBP	13.52	□□□□□ -0.25
LDHA-222	ENST00000543695	COL5A3	P25940	1745 aa	Predicted RBP	13.51	□□□□□ -0.25
LDHA-222	ENST00000543695	BRD1	O95696	1058 aa		13.51	□□□□□ -0.25
LDHA-222	ENST00000543695	A1BG	P04217	495 aa		13.51	□□□□□ -0.25
LDHA-222	ENST00000543695	KCNA3	P22001	575 aa		13.51	□□□□□ -0.25
LDHA-222	ENST00000543695	MRE11	P49959	708 aa		13.51	□□□□□ -0.25
LDHA-222	ENST00000543695	EIF5	P55010	431 aa	Known RBP	13.51	□□□□□ -0.25
LDHA-222	ENST00000543695	NMI	Q13287	307 aa	Predicted RBP	13.51	□□□□□ -0.25
LDHA-222	ENST00000543695	NFIX	Q14938	502 aa		13.51	□□□□□ -0.25
LDHA-222	ENST00000543695	DALRD3	Q5D0E6	543 aa	Known RBP	13.51	□□□□□ -0.25
LDHA-222	ENST00000543695	KLHDC4	Q8TBB5	520 aa		13.51	□□□□□ -0.25
LDHA-222	ENST00000543695	UPF3B	Q9BZI7	483 aa	Known RBP	13.51	□□□□□ -0.25
LDHA-222	ENST00000543695	GZF1	Q9H116	711 aa	Predicted RBP	13.51	□□□□□ -0.25
LDHA-222	ENST00000543695	PTH1R	Q03431	593 aa		13.5	□□□□□ -0.25
LDHA-222	ENST00000543695	TFCP2	Q12800	502 aa		13.5	□□□□□ -0.25
LDHA-222	ENST00000543695	NECTIN1	Q15223	517 aa		13.5	□□□□□ -0.25
LDHA-222	ENST00000543695	MCTP1	Q6DN14	999 aa		13.5	□□□□□ -0.25
LDHA-222	ENST00000543695	LMBR1L	Q6UX01	489 aa		13.5	□□□□□ -0.25
LDHA-222	ENST00000543695	RASEF	Q8IZ41	740 aa		13.5	□□□□□ -0.25
LDHA-222	ENST00000543695	MAP4K1	Q92918	833 aa		13.5	□□□□□ -0.25
LDHA-222	ENST00000543695	FSD1	Q9BTV5	496 aa		13.5	□□□□□ -0.25
LDHA-222	ENST00000543695	ISCA1	Q9BUE6	129 aa		13.5	□□□□□ -0.25
LDHA-222	ENST00000543695	BOLA2	Q9H3K6	86 aa		13.5	□□□□□ -0.25
LDHA-222	ENST00000543695	LMBRD1	Q9NUN5	540 aa		13.5	□□□□□ -0.25
LDHA-222	ENST00000543695	BRPF3	Q9ULD4	1205 aa		13.5	□□□□□ -0.25
LDHA-222	ENST00000543695	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.5	□□□□□ -0.25
LDHA-222	ENST00000543695	ZNF609	O15014	1411 aa		13.49	□□□□□ -0.25
LDHA-222	ENST00000543695	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.49	□□□□□ -0.25
LDHA-222	ENST00000543695	CIAO1	O76071	339 aa		13.49	□□□□□ -0.25
LDHA-222	ENST00000543695	SERPINB2	P05120	415 aa		13.49	□□□□□ -0.25
LDHA-222	ENST00000543695	IL6ST	P40189	918 aa	Predicted RBP	13.49	□□□□□ -0.25
LDHA-222	ENST00000543695	TRIM28	Q13263	835 aa	Known RBP	13.49	□□□□□ -0.25
LDHA-222	ENST00000543695	PKP1	Q13835	747 aa		13.49	□□□□□ -0.25
LDHA-222	ENST00000543695	VPS53	Q5VIR6	699 aa		13.49	□□□□□ -0.25
LDHA-222	ENST00000543695	ZNF526	Q8TF50	670 aa	Predicted RBP	13.49	□□□□□ -0.25
LDHA-222	ENST00000543695	JARID2	Q92833	1246 aa	Predicted RBP	13.49	□□□□□ -0.25
LDHA-222	ENST00000543695	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.49	□□□□□ -0.25
LDHA-222	ENST00000543695	ZSWIM6	Q9HCJ5	1215 aa		13.49	□□□□□ -0.25
LDHA-222	ENST00000543695	DBNL	Q9UJU6	430 aa	Known RBP	13.49	□□□□□ -0.25
LDHA-222	ENST00000543695	LIMCH1	Q9UPQ0	1083 aa		13.49	□□□□□ -0.25
LDHA-222	ENST00000543695	RBM8A	Q9Y5S9	174 aa	Known RBP	13.49	□□□□□ -0.25
LDHA-222	ENST00000543695	ZKSCAN1	P17029	563 aa	Predicted RBP	13.48	□□□□□ -0.25
LDHA-222	ENST00000543695	CHRNA5	P30532	468 aa		13.48	□□□□□ -0.25
LDHA-222	ENST00000543695	IL15	P40933	162 aa	Predicted RBP	13.48	□□□□□ -0.25
LDHA-222	ENST00000543695	AK2	P54819	239 aa		13.48	□□□□□ -0.25
LDHA-222	ENST00000543695	TCIRG1	Q13488	830 aa		13.48	□□□□□ -0.25
LDHA-222	ENST00000543695	CREB3L3	Q68CJ9	461 aa		13.48	□□□□□ -0.25
LDHA-222	ENST00000543695	HAUS7	Q99871	368 aa		13.48	□□□□□ -0.25
LDHA-222	ENST00000543695	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.48	□□□□□ -0.25
LDHA-222	ENST00000543695	BCL2L12	Q9HB09	334 aa		13.48	□□□□□ -0.25
LDHA-222	ENST00000543695	FBXO3	Q9UK99	471 aa		13.48	□□□□□ -0.25
LDHA-222	ENST00000543695	TBC1D2B	Q9UPU7	963 aa		13.48	□□□□□ -0.25
LDHA-222	ENST00000543695	DDX49	Q9Y6V7	483 aa	Known RBP	13.48	□□□□□ -0.25
LDHA-222	ENST00000543695	C4A	P0C0L4	1744 aa		13.47	□□□□□ -0.25
LDHA-222	ENST00000543695	ARAP2	Q8WZ64	1704 aa		13.47	□□□□□ -0.25
LDHA-222	ENST00000543695	WDR33	Q9C0J8	1336 aa	Known RBP	13.47	□□□□□ -0.25
LDHA-222	ENST00000543695		A0A0D9SFI3	127 aa		13.47	□□□□□ -0.25
LDHA-222	ENST00000543695	XRCC6	P12956	609 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
LDHA-222	ENST00000543695	CAST	P20810	708 aa	Known RBP	13.47	□□□□□ -0.25

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