RNA–Protein interactions for RNA: ENST00000543631.5

SPARCL1-210, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-210ENST00000543631 SEPT12Q8IYM1 358 aa6.64□□□□□ -1.35
SPARCL1-210ENST00000543631 NGEFQ8N5V2 710 aa6.64□□□□□ -1.35
SPARCL1-210ENST00000543631 GTPBP3Q969Y2 492 aaKnown RBP6.64□□□□□ -1.35
SPARCL1-210ENST00000543631 ENAMQ9NRM1 1142 aa6.64□□□□□ -1.35
SPARCL1-210ENST00000543631 DYRK1BQ9Y463 629 aa6.64□□□□□ -1.35
SPARCL1-210ENST00000543631 ZBED9Q6R2W3 1325 aa6.64□□□□□ -1.35
SPARCL1-210ENST00000543631 INSRP06213 1382 aa6.64□□□□□ -1.35
SPARCL1-210ENST00000543631 AATKQ6ZMQ8 1374 aa6.64□□□□□ -1.35
SPARCL1-210ENST00000543631 ZBTB7CA1YPR0 619 aa6.63□□□□□ -1.35
SPARCL1-210ENST00000543631 PHF20L1A8MW92 1017 aa6.63□□□□□ -1.35
SPARCL1-210ENST00000543631 USP17L8P0C7I0 530 aa6.63□□□□□ -1.35
SPARCL1-210ENST00000543631 SNRPNP63162 240 aaKnown RBP6.63□□□□□ -1.35
SPARCL1-210ENST00000543631 MST1RQ04912 1400 aa6.63□□□□□ -1.35
SPARCL1-210ENST00000543631 NUTM2GQ5VZR2 741 aa6.63□□□□□ -1.35
SPARCL1-210ENST00000543631 LRRC4BQ9NT99 713 aa6.63□□□□□ -1.35
SPARCL1-210ENST00000543631 SLAIN2Q9P270 581 aa6.63□□□□□ -1.35
SPARCL1-210ENST00000543631 USP31Q70CQ4 1352 aa6.62□□□□□ -1.35
SPARCL1-210ENST00000543631 A0A1W2PRU2 124 aa6.62□□□□□ -1.35
SPARCL1-210ENST00000543631 ATP5J2-PTCD1G3V325 749 aa6.62□□□□□ -1.35
SPARCL1-210ENST00000543631 TOM1O60784 492 aa6.62□□□□□ -1.35
SPARCL1-210ENST00000543631 GIGYF1O75420 1035 aaPredicted RBP6.62□□□□□ -1.35
SPARCL1-210ENST00000543631 NEFLP07196 543 aa6.62□□□□□ -1.35
SPARCL1-210ENST00000543631 XPCQ01831 940 aaPredicted RBP6.62□□□□□ -1.35
SPARCL1-210ENST00000543631 POU4F2Q12837 409 aa6.62□□□□□ -1.35
SPARCL1-210ENST00000543631 PDE3BQ13370 1112 aa6.62□□□□□ -1.35
SPARCL1-210ENST00000543631 RRS1Q15050 365 aaKnown RBP6.62□□□□□ -1.35
SPARCL1-210ENST00000543631 C1orf229Q6ZS94 237 aaPredicted RBP6.62□□□□□ -1.35
SPARCL1-210ENST00000543631 BEND7Q8N7W2 519 aaPredicted RBP6.62□□□□□ -1.35
SPARCL1-210ENST00000543631 GRIP2Q9C0E4 1043 aa6.62□□□□□ -1.35
SPARCL1-210ENST00000543631 POLKQ9UBT6 870 aa6.62□□□□□ -1.35
SPARCL1-210ENST00000543631 PIK3C2AO00443 1686 aa6.61□□□□□ -1.35
SPARCL1-210ENST00000543631 CDK12Q9NYV4 1490 aaPredicted RBP6.61□□□□□ -1.35
SPARCL1-210ENST00000543631 OVOS2A0A0J9YW53 1432 aa6.61□□□□□ -1.35
SPARCL1-210ENST00000543631 OVOS2Q6IE36 1432 aa6.61□□□□□ -1.35
SPARCL1-210ENST00000543631 SMG6Q86US8 1419 aaKnown RBP6.61□□□□□ -1.35
SPARCL1-210ENST00000543631 ARHGEF10O15013 1369 aa6.61□□□□□ -1.35
SPARCL1-210ENST00000543631 KRBA1A5PL33 1030 aa6.61□□□□□ -1.35
SPARCL1-210ENST00000543631 OIP5O43482 229 aa6.61□□□□□ -1.35
SPARCL1-210ENST00000543631 HOXB4P17483 251 aaPredicted RBP6.61□□□□□ -1.35
SPARCL1-210ENST00000543631 ERVK-9P63128 1117 aa6.61□□□□□ -1.35
SPARCL1-210ENST00000543631 CCDC146Q8IYE0 955 aa6.61□□□□□ -1.35
SPARCL1-210ENST00000543631 RUNDC1Q96C34 613 aa6.61□□□□□ -1.35
SPARCL1-210ENST00000543631 FAM117AQ9C073 453 aa6.61□□□□□ -1.35
SPARCL1-210ENST00000543631 LTN1O94822 1766 aa6.61□□□□□ -1.35
SPARCL1-210ENST00000543631 SSH2Q76I76 1423 aa6.6□□□□□ -1.35
SPARCL1-210ENST00000543631 SBNO1A3KN83 1393 aa6.6□□□□□ -1.35
SPARCL1-210ENST00000543631 FLT4P35916 1363 aa6.6□□□□□ -1.35
SPARCL1-210ENST00000543631 KIF24Q5T7B8 1368 aa6.6□□□□□ -1.35
SPARCL1-210ENST00000543631 SPATA31C2B4DYI2 1134 aa6.6□□□□□ -1.35
SPARCL1-210ENST00000543631 SHISA8B8ZZ34 492 aa6.6□□□□□ -1.35
SPARCL1-210ENST00000543631 COL8A1P27658 744 aa6.6□□□□□ -1.35
SPARCL1-210ENST00000543631 SCTRP47872 440 aa6.6□□□□□ -1.35
SPARCL1-210ENST00000543631 UBAP2LQ14157 1087 aaKnown RBP6.6□□□□□ -1.35
SPARCL1-210ENST00000543631 NBPF10Q6P3W6 841 aaKnown RBP6.6□□□□□ -1.35
SPARCL1-210ENST00000543631 RIPOR1Q6ZS17 1223 aa6.6□□□□□ -1.35
SPARCL1-210ENST00000543631 NBPF15Q8N660 670 aa6.6□□□□□ -1.35
SPARCL1-210ENST00000543631 GPBP1L1Q9HC44 474 aaPredicted RBP6.6□□□□□ -1.35
SPARCL1-210ENST00000543631 USP54Q70EL1 1684 aa6.6□□□□□ -1.35
SPARCL1-210ENST00000543631 BLMP54132 1417 aaPredicted RBP6.59□□□□□ -1.35
SPARCL1-210ENST00000543631 SHPRHQ149N8 1683 aa6.59□□□□□ -1.35
SPARCL1-210ENST00000543631 APAF1O14727 1248 aa6.59□□□□□ -1.35
SPARCL1-210ENST00000543631 LMOD3Q0VAK6 560 aa6.59□□□□□ -1.35
SPARCL1-210ENST00000543631 NEUROD2Q15784 382 aa6.59□□□□□ -1.35
SPARCL1-210ENST00000543631 BRINP3Q76B58 766 aa6.59□□□□□ -1.35
SPARCL1-210ENST00000543631 NEDD1Q8NHV4 660 aa6.59□□□□□ -1.35
SPARCL1-210ENST00000543631 TRPM3Q9HCF6 1732 aaPredicted RBP6.59□□□□□ -1.36
SPARCL1-210ENST00000543631 TNS3Q68CZ2 1445 aa6.59□□□□□ -1.36
SPARCL1-210ENST00000543631 RTL1A6NKG5 1358 aa6.58□□□□□ -1.36
SPARCL1-210ENST00000543631 MAP3K19Q56UN5 1328 aa6.58□□□□□ -1.36
SPARCL1-210ENST00000543631 MEN1O00255 615 aa6.58□□□□□ -1.36
SPARCL1-210ENST00000543631 TRAK2O60296 914 aa6.58□□□□□ -1.36
SPARCL1-210ENST00000543631 GPR37L1O60883 481 aa6.58□□□□□ -1.36
SPARCL1-210ENST00000543631 GCP02774 474 aa6.58□□□□□ -1.36
SPARCL1-210ENST00000543631 FBLN1P23142 703 aa6.58□□□□□ -1.36
SPARCL1-210ENST00000543631 CALD1Q05682 793 aaKnown RBP6.58□□□□□ -1.36
SPARCL1-210ENST00000543631 CLN3Q13286 438 aa6.58□□□□□ -1.36
SPARCL1-210ENST00000543631 LRRC59Q96AG4 307 aaKnown RBP6.58□□□□□ -1.36
SPARCL1-210ENST00000543631 LTV1Q96GA3 475 aaPredicted RBP6.58□□□□□ -1.36
SPARCL1-210ENST00000543631 KDM4CQ9H3R0 1056 aa6.58□□□□□ -1.36
SPARCL1-210ENST00000543631 PNPLA6Q8IY17 1366 aa6.57□□□□□ -1.36
SPARCL1-210ENST00000543631 SPATA31A3Q5VYP0 1347 aa6.57□□□□□ -1.36
SPARCL1-210ENST00000543631 H7C1W4 665 aa6.57□□□□□ -1.36
SPARCL1-210ENST00000543631 HMOX1P09601 288 aa6.57□□□□□ -1.36
SPARCL1-210ENST00000543631 FBXO45P0C2W1 286 aa6.57□□□□□ -1.36
SPARCL1-210ENST00000543631 CSB-PGBD3P0DP91 1061 aa6.57□□□□□ -1.36
SPARCL1-210ENST00000543631 MX2P20592 715 aa6.57□□□□□ -1.36
SPARCL1-210ENST00000543631 HOXC9P31274 260 aa6.57□□□□□ -1.36
SPARCL1-210ENST00000543631 PRKAR2BP31323 418 aa6.57□□□□□ -1.36
SPARCL1-210ENST00000543631 RFC5P40937 340 aa6.57□□□□□ -1.36
SPARCL1-210ENST00000543631 EIF4A2Q14240 407 aaKnown RBP6.57□□□□□ -1.36
SPARCL1-210ENST00000543631 HSP90AB2PQ58FF8 381 aa6.57□□□□□ -1.36
SPARCL1-210ENST00000543631 TCP11L2Q8N4U5 519 aa6.57□□□□□ -1.36
SPARCL1-210ENST00000543631 DDX17Q92841 729 aaKnown RBP6.57□□□□□ -1.36
SPARCL1-210ENST00000543631 GJD4Q96KN9 370 aaPredicted RBP6.57□□□□□ -1.36
SPARCL1-210ENST00000543631 GAS2L1Q99501 681 aaPredicted RBP6.57□□□□□ -1.36
SPARCL1-210ENST00000543631 OSBPL3Q9H4L5 887 aa6.57□□□□□ -1.36
SPARCL1-210ENST00000543631 ALS2Q96Q42 1657 aa6.57□□□□□ -1.36
SPARCL1-210ENST00000543631 ROBO1Q9Y6N7 1651 aa6.56□□□□□ -1.36
SPARCL1-210ENST00000543631 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.56□□□□□ -1.36
SPARCL1-210ENST00000543631 UBAP1LF5GYI3 381 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms