RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 AIDAQ96BJ3 306 aa9.55□□□□□ -0.88
TRIM59-208ENST00000543469 OSBPL3Q9H4L5 887 aa9.55□□□□□ -0.88
TRIM59-208ENST00000543469 STAP2Q9UGK3 403 aa9.55□□□□□ -0.88
TRIM59-208ENST00000543469 KDM3BQ7LBC6 1761 aa9.55□□□□□ -0.88
TRIM59-208ENST00000543469 ATP5JP18859 108 aa9.54□□□□□ -0.88
TRIM59-208ENST00000543469 ARHGEF1Q92888 912 aaKnown RBP9.54□□□□□ -0.88
TRIM59-208ENST00000543469 BACH2Q9BYV9 841 aa9.54□□□□□ -0.88
TRIM59-208ENST00000543469 XDHP47989 1333 aa9.54□□□□□ -0.88
TRIM59-208ENST00000543469 HELLSQ9NRZ9 838 aa9.54□□□□□ -0.88
TRIM59-208ENST00000543469 DHX16O60231 1041 aaKnown RBP9.54□□□□□ -0.88
TRIM59-208ENST00000543469 ANAPC15P60006 121 aa9.54□□□□□ -0.88
TRIM59-208ENST00000543469 GRAPQ13588 217 aa9.54□□□□□ -0.88
TRIM59-208ENST00000543469 SF3B3Q15393 1217 aaKnown RBP9.54□□□□□ -0.88
TRIM59-208ENST00000543469 INTS5Q6P9B9 1019 aaKnown RBP9.54□□□□□ -0.88
TRIM59-208ENST00000543469 GRAPLQ8TC17 118 aaPredicted RBP9.54□□□□□ -0.88
TRIM59-208ENST00000543469 BRIP1Q9BX63 1249 aa9.54□□□□□ -0.88
TRIM59-208ENST00000543469 RTL9Q8NET4 1388 aa9.54□□□□□ -0.88
TRIM59-208ENST00000543469 RGPD5Q99666 1765 aa9.54□□□□□ -0.88
TRIM59-208ENST00000543469 IGKV5-2P06315 115 aa9.54□□□□□ -0.88
TRIM59-208ENST00000543469 TFCP2Q12800 502 aa9.54□□□□□ -0.88
TRIM59-208ENST00000543469 IMMTQ16891 758 aaKnown RBP9.54□□□□□ -0.88
TRIM59-208ENST00000543469 MASTLQ96GX5 879 aa9.54□□□□□ -0.88
TRIM59-208ENST00000543469 ZSCAN31Q96LW9 406 aaPredicted RBP9.54□□□□□ -0.88
TRIM59-208ENST00000543469 BSDC1Q9NW68 430 aaPredicted RBP9.54□□□□□ -0.88
TRIM59-208ENST00000543469 PRAMEF22A3QJZ6 481 aa9.53□□□□□ -0.88
TRIM59-208ENST00000543469 SLC10A5Q5PT55 438 aa9.53□□□□□ -0.88
TRIM59-208ENST00000543469 CRAMP1Q96RY5 1269 aa9.53□□□□□ -0.88
TRIM59-208ENST00000543469 CCDC8Q9H0W5 538 aaPredicted RBP9.53□□□□□ -0.88
TRIM59-208ENST00000543469 ATP6V1DQ9Y5K8 247 aa9.53□□□□□ -0.88
TRIM59-208ENST00000543469 ITPK1Q13572 414 aa9.53□□□□□ -0.88
TRIM59-208ENST00000543469 TNNQ9UQP3 1299 aa9.53□□□□□ -0.88
TRIM59-208ENST00000543469 C2CD5Q86YS7 1000 aa9.53□□□□□ -0.88
TRIM59-208ENST00000543469 HCLS1P14317 486 aaPredicted RBP9.52□□□□□ -0.88
TRIM59-208ENST00000543469 HIBADHP31937 336 aaKnown RBP9.52□□□□□ -0.88
TRIM59-208ENST00000543469 CCDC85AQ96PX6 553 aaPredicted RBP9.52□□□□□ -0.88
TRIM59-208ENST00000543469 CRNKL1Q9BZJ0 848 aaKnown RBP9.52□□□□□ -0.88
TRIM59-208ENST00000543469 PAG1Q9NWQ8 432 aa9.52□□□□□ -0.88
TRIM59-208ENST00000543469 PLEKHM2Q8IWE5 1019 aa9.52□□□□□ -0.89
TRIM59-208ENST00000543469 LAMB4A4D0S4 1761 aa9.52□□□□□ -0.89
TRIM59-208ENST00000543469 NRAPQ86VF7 1730 aa9.52□□□□□ -0.89
TRIM59-208ENST00000543469 A0A1B0GUL7 405 aa9.52□□□□□ -0.89
TRIM59-208ENST00000543469 SLC15A2Q16348 729 aa9.52□□□□□ -0.89
TRIM59-208ENST00000543469 SUSD4Q5VX71 490 aa9.52□□□□□ -0.89
TRIM59-208ENST00000543469 RTKN2Q8IZC4 609 aa9.52□□□□□ -0.89
TRIM59-208ENST00000543469 BOLA2Q9H3K6 86 aa9.52□□□□□ -0.89
TRIM59-208ENST00000543469 SMARCA5O60264 1052 aaPredicted RBP9.52□□□□□ -0.89
TRIM59-208ENST00000543469 IDH1O75874 414 aaKnown RBP9.52□□□□□ -0.89
TRIM59-208ENST00000543469 MMP14P50281 582 aa9.52□□□□□ -0.89
TRIM59-208ENST00000543469 MAP4K4O95819 1239 aaPredicted RBP9.51□□□□□ -0.89
TRIM59-208ENST00000543469 AKAP17AQ02040 695 aaKnown RBP9.51□□□□□ -0.89
TRIM59-208ENST00000543469 DPP8Q6V1X1 898 aaPredicted RBP9.51□□□□□ -0.89
TRIM59-208ENST00000543469 MPNDQ8N594 471 aa9.51□□□□□ -0.89
TRIM59-208ENST00000543469 JDP2Q8WYK2 163 aa9.51□□□□□ -0.89
TRIM59-208ENST00000543469 HOOK2Q96ED9 719 aa9.51□□□□□ -0.89
TRIM59-208ENST00000543469 TOMM22Q9NS69 142 aa9.51□□□□□ -0.89
TRIM59-208ENST00000543469 CYP46A1Q9Y6A2 500 aa9.51□□□□□ -0.89
TRIM59-208ENST00000543469 RNF113AO15541 343 aaKnown RBP9.51□□□□□ -0.89
TRIM59-208ENST00000543469 CSF1RP07333 972 aa9.51□□□□□ -0.89
TRIM59-208ENST00000543469 TTLL11Q8NHH1 800 aa9.51□□□□□ -0.89
TRIM59-208ENST00000543469 GBP4Q96PP9 640 aa9.51□□□□□ -0.89
TRIM59-208ENST00000543469 RPAP1Q9BWH6 1393 aaPredicted RBP9.51□□□□□ -0.89
TRIM59-208ENST00000543469 PNMA6EA0A0J9YXQ4 647 aa9.51□□□□□ -0.89
TRIM59-208ENST00000543469 PPEF1O14829 653 aaPredicted RBP9.51□□□□□ -0.89
TRIM59-208ENST00000543469 PDE8BO95263 885 aa9.51□□□□□ -0.89
TRIM59-208ENST00000543469 STYK1Q6J9G0 422 aa9.51□□□□□ -0.89
TRIM59-208ENST00000543469 IPO9Q96P70 1041 aaKnown RBP9.51□□□□□ -0.89
TRIM59-208ENST00000543469 NAP1L2Q9ULW6 460 aaPredicted RBP9.51□□□□□ -0.89
TRIM59-208ENST00000543469 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.51□□□□□ -0.89
TRIM59-208ENST00000543469 MYO1BO43795 1136 aa9.51□□□□□ -0.89
TRIM59-208ENST00000543469 MCMDC2Q4G0Z9 681 aa9.51□□□□□ -0.89
TRIM59-208ENST00000543469 ERFEQ4G0M1 354 aa9.5□□□□□ -0.89
TRIM59-208ENST00000543469 XAGE2Q96GT9 111 aa9.5□□□□□ -0.89
TRIM59-208ENST00000543469 RGPD2P0DJD1 1756 aa9.5□□□□□ -0.89
TRIM59-208ENST00000543469 KCPQ6ZWJ8 1503 aa9.5□□□□□ -0.89
TRIM59-208ENST00000543469 UFL1O94874 794 aa9.5□□□□□ -0.89
TRIM59-208ENST00000543469 CNNM2Q9H8M5 875 aa9.5□□□□□ -0.89
TRIM59-208ENST00000543469 PA2G4Q9UQ80 394 aaKnown RBP9.5□□□□□ -0.89
TRIM59-208ENST00000543469 RBM19Q9Y4C8 960 aaKnown RBP9.5□□□□□ -0.89
TRIM59-208ENST00000543469 TDO2P48775 406 aa9.49□□□□□ -0.89
TRIM59-208ENST00000543469 CHAF1AQ13111 956 aaPredicted RBP9.49□□□□□ -0.89
TRIM59-208ENST00000543469 HLFQ16534 295 aa9.49□□□□□ -0.89
TRIM59-208ENST00000543469 CCDC93Q567U6 631 aa9.49□□□□□ -0.89
TRIM59-208ENST00000543469 CCDC34Q96HJ3 373 aa9.49□□□□□ -0.89
TRIM59-208ENST00000543469 GOLIM4O00461 696 aa9.49□□□□□ -0.89
TRIM59-208ENST00000543469 CDKL5O76039 1030 aa9.49□□□□□ -0.89
TRIM59-208ENST00000543469 ADAMTS7Q9UKP4 1686 aa9.49□□□□□ -0.89
TRIM59-208ENST00000543469 NTSR2O95665 410 aa9.49□□□□□ -0.89
TRIM59-208ENST00000543469 PDCP20941 246 aa9.49□□□□□ -0.89
TRIM59-208ENST00000543469 NAA16Q6N069 864 aaPredicted RBP9.49□□□□□ -0.89
TRIM59-208ENST00000543469 ABCF2Q9UG63 623 aa9.49□□□□□ -0.89
TRIM59-208ENST00000543469 NSFL1CQ9UNZ2 370 aaKnown RBP9.49□□□□□ -0.89
TRIM59-208ENST00000543469 HLA-DOAP06340 250 aa9.49□□□□□ -0.89
TRIM59-208ENST00000543469 LDHBP07195 334 aaKnown RBP9.49□□□□□ -0.89
TRIM59-208ENST00000543469 MMP10P09238 476 aa9.49□□□□□ -0.89
TRIM59-208ENST00000543469 XBP1P17861 261 aa9.49□□□□□ -0.89
TRIM59-208ENST00000543469 PTPN12Q05209 780 aaKnown RBP9.49□□□□□ -0.89
TRIM59-208ENST00000543469 KBTBD3Q8NAB2 608 aa9.49□□□□□ -0.89
TRIM59-208ENST00000543469 ZNF512BQ96KM6 892 aaPredicted RBP9.49□□□□□ -0.89
TRIM59-208ENST00000543469 NAPBQ9H115 298 aa9.49□□□□□ -0.89
TRIM59-208ENST00000543469 CWC22Q9HCG8 908 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms