RNA–Protein interactions for RNA: ENST00000543428.5

PSME3-204, Transcript of proteasome activator subunit 3, humanhuman

TSL 2

Gene PSME3, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-204ENST00000543428 GGA1Q9UJY5 639 aa27.38■■□□□ 1.97
PSME3-204ENST00000543428 H7C1W4 665 aa27.37■■□□□ 1.97
PSME3-204ENST00000543428 GCKRQ14397 625 aa27.37■■□□□ 1.97
PSME3-204ENST00000543428 DOK7Q18PE1 504 aa27.37■■□□□ 1.97
PSME3-204ENST00000543428 TTLL11Q8NHH1 800 aa27.37■■□□□ 1.97
PSME3-204ENST00000543428 GPR101Q96P66 508 aaPredicted RBP27.37■■□□□ 1.97
PSME3-204ENST00000543428 ECE2O60344 883 aa27.36■■□□□ 1.97
PSME3-204ENST00000543428 LINS1Q8NG48 757 aa27.36■■□□□ 1.97
PSME3-204ENST00000543428 GREM2Q9H772 168 aa27.35■■□□□ 1.97
PSME3-204ENST00000543428 PSMD14O00487 310 aa27.34■■□□□ 1.97
PSME3-204ENST00000543428 CNOT7Q9UIV1 285 aaKnown RBP27.34■■□□□ 1.97
PSME3-204ENST00000543428 XDHP47989 1333 aa27.34■■□□□ 1.97
PSME3-204ENST00000543428 H7C1D1 291 aa27.33■■□□□ 1.97
PSME3-204ENST00000543428 ZBTB12Q9Y330 459 aaPredicted RBP27.32■■□□□ 1.96
PSME3-204ENST00000543428 CNTNAP1P78357 1384 aa27.32■■□□□ 1.96
PSME3-204ENST00000543428 F6X3S4 739 aa27.31■■□□□ 1.96
PSME3-204ENST00000543428 ATP2B4P23634 1241 aa27.31■■□□□ 1.96
PSME3-204ENST00000543428 MICALL2Q8IY33 904 aa27.31■■□□□ 1.96
PSME3-204ENST00000543428 BSDC1Q9NW68 430 aaPredicted RBP27.31■■□□□ 1.96
PSME3-204ENST00000543428 RTL9Q8NET4 1388 aa27.31■■□□□ 1.96
PSME3-204ENST00000543428 SPEF2Q9C093 1822 aa27.3■■□□□ 1.96
PSME3-204ENST00000543428 IGHMBP2P38935 993 aaKnown RBP27.3■■□□□ 1.96
PSME3-204ENST00000543428 DPF2Q92785 391 aa27.3■■□□□ 1.96
PSME3-204ENST00000543428 PLA2G12BQ9BX93 195 aa27.3■■□□□ 1.96
PSME3-204ENST00000543428 ABT1Q9ULW3 272 aaKnown RBP27.3■■□□□ 1.96
PSME3-204ENST00000543428 RPS12P25398 132 aaKnown RBP27.29■■□□□ 1.96
PSME3-204ENST00000543428 KCNQ5Q9NR82 932 aa27.29■■□□□ 1.96
PSME3-204ENST00000543428 ZNF521Q96K83 1311 aa27.29■■□□□ 1.96
PSME3-204ENST00000543428 HSPA1AP0DMV8 641 aaKnown RBP27.28■■□□□ 1.96
PSME3-204ENST00000543428 HSPA1BP0DMV9 641 aaKnown RBP27.28■■□□□ 1.96
PSME3-204ENST00000543428 SHTN1A0MZ66 631 aa27.27■■□□□ 1.96
PSME3-204ENST00000543428 TRAF5O00463 557 aa27.27■■□□□ 1.96
PSME3-204ENST00000543428 ITGA6P23229 1130 aa27.27■■□□□ 1.96
PSME3-204ENST00000543428 CASP7P55210 303 aa27.27■■□□□ 1.96
PSME3-204ENST00000543428 TRPM4Q8TD43 1214 aa27.27■■□□□ 1.96
PSME3-204ENST00000543428 ZC3H15Q8WU90 426 aaKnown RBP27.27■■□□□ 1.96
PSME3-204ENST00000543428 MINPP1Q9UNW1 487 aa27.27■■□□□ 1.96
PSME3-204ENST00000543428 PCNTO95613 3336 aa27.27■■□□□ 1.96
PSME3-204ENST00000543428 FMR1Q06787 632 aaKnown RBP eCLIP27.26■■□□□ 1.95
PSME3-204ENST00000543428 FAM161AQ3B820 660 aa27.26■■□□□ 1.95
PSME3-204ENST00000543428 BEND3Q5T5X7 828 aa27.26■■□□□ 1.95
PSME3-204ENST00000543428 HIRAP54198 1017 aaPredicted RBP27.25■■□□□ 1.95
PSME3-204ENST00000543428 DEFB115Q30KQ5 88 aa27.25■■□□□ 1.95
PSME3-204ENST00000543428 MPHOSPH8Q99549 860 aa27.25■■□□□ 1.95
PSME3-204ENST00000543428 TRPM7Q96QT4 1865 aa27.24■■□□□ 1.95
PSME3-204ENST00000543428 E9PSI1 815 aa27.24■■□□□ 1.95
PSME3-204ENST00000543428 CSF1RP07333 972 aa27.24■■□□□ 1.95
PSME3-204ENST00000543428 VEGFBP49765 207 aa27.24■■□□□ 1.95
PSME3-204ENST00000543428 IFFO2Q5TF58 517 aa27.24■■□□□ 1.95
PSME3-204ENST00000543428 SLC4A10Q6U841 1118 aa27.24■■□□□ 1.95
PSME3-204ENST00000543428 SAMD7Q7Z3H4 446 aa27.24■■□□□ 1.95
PSME3-204ENST00000543428 PGAP2Q9UHJ9 254 aa27.24■■□□□ 1.95
PSME3-204ENST00000543428 SCN9AQ15858 1988 aa27.23■■□□□ 1.95
PSME3-204ENST00000543428 VIL1P09327 827 aaKnown RBP27.23■■□□□ 1.95
PSME3-204ENST00000543428 CCT4P50991 539 aaKnown RBP27.23■■□□□ 1.95
PSME3-204ENST00000543428 TBC1D10BQ4KMP7 808 aaPredicted RBP27.23■■□□□ 1.95
PSME3-204ENST00000543428 GLIS2Q9BZE0 524 aaPredicted RBP27.23■■□□□ 1.95
PSME3-204ENST00000543428 CHMP3Q9Y3E7 222 aa27.23■■□□□ 1.95
PSME3-204ENST00000543428 ANKRD18BA2A2Z9 1011 aa27.22■■□□□ 1.95
PSME3-204ENST00000543428 RASSF10A6NK89 507 aa27.22■■□□□ 1.95
PSME3-204ENST00000543428 RBM26Q5T8P6 1007 aaKnown RBP27.22■■□□□ 1.95
PSME3-204ENST00000543428 C9orf78Q9NZ63 289 aaPredicted RBP27.22■■□□□ 1.95
PSME3-204ENST00000543428 PAXIP1Q6ZW49 1069 aaPredicted RBP27.21■■□□□ 1.95
PSME3-204ENST00000543428 CDC37L1Q7L3B6 337 aa27.21■■□□□ 1.95
PSME3-204ENST00000543428 ANKRD2Q9GZV1 360 aa27.21■■□□□ 1.95
PSME3-204ENST00000543428 MED23Q9ULK4 1368 aa27.21■■□□□ 1.95
PSME3-204ENST00000543428 GRM8O00222 908 aa27.2■■□□□ 1.94
PSME3-204ENST00000543428 IFIT5Q13325 482 aaKnown RBP27.2■■□□□ 1.94
PSME3-204ENST00000543428 CST9Q5W186 159 aa27.2■■□□□ 1.94
PSME3-204ENST00000543428 PODNQ7Z5L7 613 aa27.2■■□□□ 1.94
PSME3-204ENST00000543428 SRCIN1Q9C0H9 1055 aa27.2■■□□□ 1.94
PSME3-204ENST00000543428 LEMD3Q9Y2U8 911 aa27.2■■□□□ 1.94
PSME3-204ENST00000543428 WTIPA6NIX2 430 aaPredicted RBP27.19■■□□□ 1.94
PSME3-204ENST00000543428 ALDH1L1O75891 902 aa27.19■■□□□ 1.94
PSME3-204ENST00000543428 CELF2O95319 508 aaKnown RBP27.19■■□□□ 1.94
PSME3-204ENST00000543428 KCNJ4P48050 445 aa27.19■■□□□ 1.94
PSME3-204ENST00000543428 RSBN1LQ6PCB5 846 aaPredicted RBP27.19■■□□□ 1.94
PSME3-204ENST00000543428 ZNF408Q9H9D4 720 aa27.19■■□□□ 1.94
PSME3-204ENST00000543428 USP17L3A6NCW0 530 aa27.18■■□□□ 1.94
PSME3-204ENST00000543428 USP17L4A6NCW7 530 aa27.18■■□□□ 1.94
PSME3-204ENST00000543428 FOXO4P98177 505 aa27.18■■□□□ 1.94
PSME3-204ENST00000543428 USP17L1Q7RTZ2 530 aa27.18■■□□□ 1.94
PSME3-204ENST00000543428 AGBL3Q8NEM8 1001 aa27.18■■□□□ 1.94
PSME3-204ENST00000543428 KIF4BQ2VIQ3 1234 aa27.17■■□□□ 1.94
PSME3-204ENST00000543428 USP48Q86UV5 1035 aa27.17■■□□□ 1.94
PSME3-204ENST00000543428 AIDAQ96BJ3 306 aa27.17■■□□□ 1.94
PSME3-204ENST00000543428 ZNF804BA4D1E1 1349 aa27.16■■□□□ 1.94
PSME3-204ENST00000543428 WDR33Q9C0J8 1336 aaKnown RBP27.16■■□□□ 1.94
PSME3-204ENST00000543428 EGFRP00533 1210 aa27.16■■□□□ 1.94
PSME3-204ENST00000543428 SLFN5Q08AF3 891 aa27.16■■□□□ 1.94
PSME3-204ENST00000543428 GRM1Q13255 1194 aa27.16■■□□□ 1.94
PSME3-204ENST00000543428 COL13A1Q5TAT6 717 aaPredicted RBP27.16■■□□□ 1.94
PSME3-204ENST00000543428 LMBR1LQ6UX01 489 aa27.16■■□□□ 1.94
PSME3-204ENST00000543428 FBXW7Q969H0 707 aa27.16■■□□□ 1.94
PSME3-204ENST00000543428 DCPSQ96C86 337 aaKnown RBP27.16■■□□□ 1.94
PSME3-204ENST00000543428 PSME4Q14997 1843 aa27.16■■□□□ 1.94
PSME3-204ENST00000543428 CCER2I3L3R5 266 aa27.15■■□□□ 1.94
PSME3-204ENST00000543428 CHRNDQ07001 517 aa27.15■■□□□ 1.94
PSME3-204ENST00000543428 CCDC57Q2TAC2 916 aa27.15■■□□□ 1.94
PSME3-204ENST00000543428 TAF7LQ5H9L4 462 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms