RNA–Protein interactions for RNA: ENST00000543103.1

NLRC5-223, Transcript of NLR family CARD domain containing 5, human

TSL 2

Gene NLRC5, Length 1,896 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NLRC5-223	ENST00000543103	ERFE	Q4G0M1	354 aa		19.96	■□□□□ 0.79
NLRC5-223	ENST00000543103	SNRK	Q9NRH2	765 aa		19.96	■□□□□ 0.79
NLRC5-223	ENST00000543103	COL4A1	P02462	1669 aa		19.95	■□□□□ 0.78
NLRC5-223	ENST00000543103	IFIT1	P09914	478 aa	Known RBP	19.94	■□□□□ 0.78
NLRC5-223	ENST00000543103	ATP2B3	Q16720	1220 aa		19.94	■□□□□ 0.78
NLRC5-223	ENST00000543103	PAG1	Q9NWQ8	432 aa		19.94	■□□□□ 0.78
NLRC5-223	ENST00000543103	TAF1	P21675	1872 aa		19.94	■□□□□ 0.78
NLRC5-223	ENST00000543103	COL24A1	Q17RW2	1714 aa		19.94	■□□□□ 0.78
NLRC5-223	ENST00000543103	MED23	Q9ULK4	1368 aa		19.94	■□□□□ 0.78
NLRC5-223	ENST00000543103	GOLIM4	O00461	696 aa		19.94	■□□□□ 0.78
NLRC5-223	ENST00000543103	ZPR1	O75312	459 aa		19.94	■□□□□ 0.78
NLRC5-223	ENST00000543103	TRIM37	O94972	964 aa		19.94	■□□□□ 0.78
NLRC5-223	ENST00000543103	PDE8B	O95263	885 aa		19.94	■□□□□ 0.78
NLRC5-223	ENST00000543103	RBM6	P78332	1123 aa	Known RBP	19.94	■□□□□ 0.78
NLRC5-223	ENST00000543103	CCDC152	Q4G0S7	254 aa		19.94	■□□□□ 0.78
NLRC5-223	ENST00000543103	KBTBD3	Q8NAB2	608 aa		19.94	■□□□□ 0.78
NLRC5-223	ENST00000543103	RFX7	Q2KHR2	1363 aa		19.93	■□□□□ 0.78
NLRC5-223	ENST00000543103	RTL9	Q8NET4	1388 aa		19.93	■□□□□ 0.78
NLRC5-223	ENST00000543103	CCDC171	Q6TFL3	1326 aa		19.93	■□□□□ 0.78
NLRC5-223	ENST00000543103	ST18	O60284	1047 aa		19.93	■□□□□ 0.78
NLRC5-223	ENST00000543103	NEK4	P51957	841 aa		19.93	■□□□□ 0.78
NLRC5-223	ENST00000543103	CCDC158	Q5M9N0	1113 aa		19.93	■□□□□ 0.78
NLRC5-223	ENST00000543103	C3orf67	Q6ZVT6	689 aa		19.93	■□□□□ 0.78
NLRC5-223	ENST00000543103	ZNF589	Q86UQ0	364 aa	Predicted RBP	19.93	■□□□□ 0.78
NLRC5-223	ENST00000543103	RASEF	Q8IZ41	740 aa		19.93	■□□□□ 0.78
NLRC5-223	ENST00000543103	FBXO41	Q8TF61	875 aa		19.93	■□□□□ 0.78
NLRC5-223	ENST00000543103	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	19.93	■□□□□ 0.78
NLRC5-223	ENST00000543103	SNX14	Q9Y5W7	946 aa		19.93	■□□□□ 0.78
NLRC5-223	ENST00000543103	AKAP11	Q9UKA4	1901 aa		19.93	■□□□□ 0.78
NLRC5-223	ENST00000543103	PHF14	O94880	888 aa		19.92	■□□□□ 0.78
NLRC5-223	ENST00000543103	HSP90B1	P14625	803 aa	Known RBP	19.92	■□□□□ 0.78
NLRC5-223	ENST00000543103	DDIT3	P35638	169 aa		19.92	■□□□□ 0.78
NLRC5-223	ENST00000543103	GORAB	Q5T7V8	394 aa		19.92	■□□□□ 0.78
NLRC5-223	ENST00000543103	HELB	Q8NG08	1087 aa	Predicted RBP	19.92	■□□□□ 0.78
NLRC5-223	ENST00000543103	SCARF1	Q14162	830 aa		19.92	■□□□□ 0.78
NLRC5-223	ENST00000543103	NFKBIB	Q15653	356 aa		19.92	■□□□□ 0.78
NLRC5-223	ENST00000543103	TTC39A	Q5SRH9	613 aa		19.92	■□□□□ 0.78
NLRC5-223	ENST00000543103	UBR3	Q6ZT12	1888 aa		19.92	■□□□□ 0.78
NLRC5-223	ENST00000543103	MROH5	Q6ZUA9	1318 aa		19.91	■□□□□ 0.78
NLRC5-223	ENST00000543103	MAP4K1	Q92918	833 aa		19.91	■□□□□ 0.78
NLRC5-223	ENST00000543103	SETDB2	Q96T68	719 aa		19.91	■□□□□ 0.78
NLRC5-223	ENST00000543103	FOXD4L1	Q9NU39	408 aa		19.91	■□□□□ 0.78
NLRC5-223	ENST00000543103	ABCC12	Q96J65	1359 aa		19.91	■□□□□ 0.78
NLRC5-223	ENST00000543103	NECTIN1	Q15223	517 aa		19.9	■□□□□ 0.78
NLRC5-223	ENST00000543103	SLFNL1	Q499Z3	407 aa		19.9	■□□□□ 0.78
NLRC5-223	ENST00000543103	TRAPPC3L	Q5T215	181 aa		19.9	■□□□□ 0.78
NLRC5-223	ENST00000543103	SEC62	Q99442	399 aa	Known RBP	19.9	■□□□□ 0.78
NLRC5-223	ENST00000543103	MPHOSPH8	Q99549	860 aa		19.9	■□□□□ 0.78
NLRC5-223	ENST00000543103	UPF3B	Q9BZI7	483 aa	Known RBP	19.9	■□□□□ 0.78
NLRC5-223	ENST00000543103	ARAP2	Q8WZ64	1704 aa		19.9	■□□□□ 0.78
NLRC5-223	ENST00000543103	FGFR2	P21802	821 aa		19.9	■□□□□ 0.78
NLRC5-223	ENST00000543103	SNAP23	O00161	211 aa		19.89	■□□□□ 0.77
NLRC5-223	ENST00000543103	RFC4	P35249	363 aa		19.89	■□□□□ 0.77
NLRC5-223	ENST00000543103	FKBP4	Q02790	459 aa	Known RBP eCLIP	19.89	■□□□□ 0.77
NLRC5-223	ENST00000543103	SF3B3	Q15393	1217 aa	Known RBP	19.89	■□□□□ 0.77
NLRC5-223	ENST00000543103	SLC10A5	Q5PT55	438 aa		19.89	■□□□□ 0.77
NLRC5-223	ENST00000543103	PRPF40B	Q6NWY9	871 aa	Known RBP	19.89	■□□□□ 0.77
NLRC5-223	ENST00000543103	RBM8A	Q9Y5S9	174 aa	Known RBP	19.89	■□□□□ 0.77
NLRC5-223	ENST00000543103	TAF5L	O75529	589 aa		19.88	■□□□□ 0.77
NLRC5-223	ENST00000543103	PI16	Q6UXB8	463 aa		19.88	■□□□□ 0.77
NLRC5-223	ENST00000543103	KCNB2	Q92953	911 aa		19.88	■□□□□ 0.77
NLRC5-223	ENST00000543103	CHMP5	Q9NZZ3	219 aa		19.88	■□□□□ 0.77
NLRC5-223	ENST00000543103	HSP90AA1	P07900	732 aa	Known RBP	19.88	■□□□□ 0.77
NLRC5-223	ENST00000543103	GTF2E1	P29083	439 aa	Predicted RBP	19.88	■□□□□ 0.77
NLRC5-223	ENST00000543103	IGHMBP2	P38935	993 aa	Known RBP	19.88	■□□□□ 0.77
NLRC5-223	ENST00000543103	PUM3	Q15397	648 aa	Known RBP	19.88	■□□□□ 0.77
NLRC5-223	ENST00000543103	CCDC129	Q6ZRS4	1044 aa		19.88	■□□□□ 0.77
NLRC5-223	ENST00000543103	MCAM	P43121	646 aa		19.87	■□□□□ 0.77
NLRC5-223	ENST00000543103	ZAP70	P43403	619 aa		19.87	■□□□□ 0.77
NLRC5-223	ENST00000543103	MCMDC2	Q4G0Z9	681 aa		19.87	■□□□□ 0.77
NLRC5-223	ENST00000543103	SLC27A3	Q5K4L6	730 aa		19.87	■□□□□ 0.77
NLRC5-223	ENST00000543103	NBPF5P	Q86XG9	351 aa	Predicted RBP	19.87	■□□□□ 0.77
NLRC5-223	ENST00000543103	PROM2	Q8N271	834 aa		19.87	■□□□□ 0.77
NLRC5-223	ENST00000543103	CCDC24	Q8N4L8	307 aa		19.87	■□□□□ 0.77
NLRC5-223	ENST00000543103	LPIN2	Q92539	896 aa		19.87	■□□□□ 0.77
NLRC5-223	ENST00000543103	NYX	Q9GZU5	481 aa		19.87	■□□□□ 0.77
NLRC5-223	ENST00000543103	MYO5A	Q9Y4I1	1855 aa	Known RBP	19.87	■□□□□ 0.77
NLRC5-223	ENST00000543103		A0A1B0GUL6	1792 aa		19.86	■□□□□ 0.77
NLRC5-223	ENST00000543103	MYH7	P12883	1935 aa		19.86	■□□□□ 0.77
NLRC5-223	ENST00000543103	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	19.86	■□□□□ 0.77
NLRC5-223	ENST00000543103	FRAT2	O75474	233 aa	Predicted RBP	19.86	■□□□□ 0.77
NLRC5-223	ENST00000543103	ADCK5	Q3MIX3	580 aa		19.86	■□□□□ 0.77
NLRC5-223	ENST00000543103	CCDC102B	Q68D86	513 aa		19.86	■□□□□ 0.77
NLRC5-223	ENST00000543103	ZNF512B	Q96KM6	892 aa	Predicted RBP	19.86	■□□□□ 0.77
NLRC5-223	ENST00000543103	PHKA1	P46020	1223 aa		19.85	■□□□□ 0.77
NLRC5-223	ENST00000543103	CREB3L3	Q68CJ9	461 aa		19.85	■□□□□ 0.77
NLRC5-223	ENST00000543103	TICAM2	Q86XR7	235 aa		19.85	■□□□□ 0.77
NLRC5-223	ENST00000543103	CDC5L	Q99459	802 aa	Known RBP	19.85	■□□□□ 0.77
NLRC5-223	ENST00000543103	KCNJ4	P48050	445 aa		19.84	■□□□□ 0.77
NLRC5-223	ENST00000543103	CHRND	Q07001	517 aa		19.84	■□□□□ 0.77
NLRC5-223	ENST00000543103	ZMYM1	Q5SVZ6	1142 aa		19.84	■□□□□ 0.77
NLRC5-223	ENST00000543103	TPTE2	Q6XPS3	522 aa		19.84	■□□□□ 0.77
NLRC5-223	ENST00000543103	SLC27A2	O14975	620 aa		19.84	■□□□□ 0.77
NLRC5-223	ENST00000543103	RNF113A	O15541	343 aa	Known RBP	19.84	■□□□□ 0.77
NLRC5-223	ENST00000543103	ADRA2B	P18089	450 aa		19.84	■□□□□ 0.77
NLRC5-223	ENST00000543103	RXRB	P28702	533 aa		19.84	■□□□□ 0.77
NLRC5-223	ENST00000543103	NFIX	Q14938	502 aa		19.84	■□□□□ 0.77
NLRC5-223	ENST00000543103	TMX3	Q96JJ7	454 aa		19.84	■□□□□ 0.77
NLRC5-223	ENST00000543103	HELLS	Q9NRZ9	838 aa		19.84	■□□□□ 0.77
NLRC5-223	ENST00000543103	RGS17	Q9UGC6	210 aa	Predicted RBP	19.84	■□□□□ 0.77

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