RNA–Protein interactions for RNA: ENST00000543087.5

TSG101-208, Transcript of tumor susceptibility 101, humanhuman

TSL 3

Gene TSG101, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-208ENST00000543087 PASKQ96RG2 1323 aa16.66■□□□□ 0.26
TSG101-208ENST00000543087 G3V3G9 751 aa16.65■□□□□ 0.26
TSG101-208ENST00000543087 UFL1O94874 794 aa16.65■□□□□ 0.26
TSG101-208ENST00000543087 DCAF8Q5TAQ9 597 aa16.65■□□□□ 0.26
TSG101-208ENST00000543087 USP50Q70EL3 339 aaPredicted RBP16.65■□□□□ 0.26
TSG101-208ENST00000543087 JMYQ8N9B5 988 aa16.65■□□□□ 0.26
TSG101-208ENST00000543087 LINS1Q8NG48 757 aa16.65■□□□□ 0.26
TSG101-208ENST00000543087 ADARB2Q9NS39 739 aaKnown RBP16.65■□□□□ 0.26
TSG101-208ENST00000543087 GGA1Q9UJY5 639 aa16.65■□□□□ 0.26
TSG101-208ENST00000543087 ZBTB12Q9Y330 459 aaPredicted RBP16.65■□□□□ 0.26
TSG101-208ENST00000543087 POLR2AP24928 1970 aaKnown RBP16.64■□□□□ 0.25
TSG101-208ENST00000543087 PSMD14O00487 310 aa16.64■□□□□ 0.25
TSG101-208ENST00000543087 ECE2O60344 883 aa16.64■□□□□ 0.25
TSG101-208ENST00000543087 CDC5LQ99459 802 aaKnown RBP16.64■□□□□ 0.25
TSG101-208ENST00000543087 PODXL2Q9NZ53 605 aa16.64■□□□□ 0.25
TSG101-208ENST00000543087 CNOT7Q9UIV1 285 aaKnown RBP16.64■□□□□ 0.25
TSG101-208ENST00000543087 ZNF521Q96K83 1311 aa16.64■□□□□ 0.25
TSG101-208ENST00000543087 SHTN1A0MZ66 631 aa16.63■□□□□ 0.25
TSG101-208ENST00000543087 TMEM88BA6NKF7 163 aa16.63■□□□□ 0.25
TSG101-208ENST00000543087 FMR1Q06787 632 aaKnown RBP eCLIP16.63■□□□□ 0.25
TSG101-208ENST00000543087 SCN9AQ15858 1988 aa16.63■□□□□ 0.25
TSG101-208ENST00000543087 WTIPA6NIX2 430 aaPredicted RBP16.62■□□□□ 0.25
TSG101-208ENST00000543087 CASP7P55210 303 aa16.62■□□□□ 0.25
TSG101-208ENST00000543087 SLC4A10Q6U841 1118 aa16.62■□□□□ 0.25
TSG101-208ENST00000543087 MINPP1Q9UNW1 487 aa16.62■□□□□ 0.25
TSG101-208ENST00000543087 TRPM7Q96QT4 1865 aa16.62■□□□□ 0.25
TSG101-208ENST00000543087 H7C1D1 291 aa16.61■□□□□ 0.25
TSG101-208ENST00000543087 TRAF5O00463 557 aa16.61■□□□□ 0.25
TSG101-208ENST00000543087 BEND3Q5T5X7 828 aa16.61■□□□□ 0.25
TSG101-208ENST00000543087 MICALL2Q8IY33 904 aa16.61■□□□□ 0.25
TSG101-208ENST00000543087 BSDC1Q9NW68 430 aaPredicted RBP16.61■□□□□ 0.25
TSG101-208ENST00000543087 XDHP47989 1333 aa16.61■□□□□ 0.25
TSG101-208ENST00000543087 ITGA6P23229 1130 aa16.6■□□□□ 0.25
TSG101-208ENST00000543087 ATP2B4P23634 1241 aa16.6■□□□□ 0.25
TSG101-208ENST00000543087 IGHMBP2P38935 993 aaKnown RBP16.6■□□□□ 0.25
TSG101-208ENST00000543087 HIRAP54198 1017 aaPredicted RBP16.6■□□□□ 0.25
TSG101-208ENST00000543087 FAM161AQ3B820 660 aa16.6■□□□□ 0.25
TSG101-208ENST00000543087 TRPM4Q8TD43 1214 aa16.6■□□□□ 0.25
TSG101-208ENST00000543087 PLA2G12BQ9BX93 195 aa16.6■□□□□ 0.25
TSG101-208ENST00000543087 E9PSI1 815 aa16.59■□□□□ 0.25
TSG101-208ENST00000543087 CSF1RP07333 972 aa16.59■□□□□ 0.25
TSG101-208ENST00000543087 RBM26Q5T8P6 1007 aaKnown RBP16.59■□□□□ 0.25
TSG101-208ENST00000543087 SAMD7Q7Z3H4 446 aa16.59■□□□□ 0.25
TSG101-208ENST00000543087 CDCA7LQ96GN5 454 aa16.59■□□□□ 0.25
TSG101-208ENST00000543087 CHMP3Q9Y3E7 222 aa16.59■□□□□ 0.25
TSG101-208ENST00000543087 RTL9Q8NET4 1388 aa16.59■□□□□ 0.25
TSG101-208ENST00000543087 FOXO4P98177 505 aa16.58■□□□□ 0.24
TSG101-208ENST00000543087 SLFN5Q08AF3 891 aa16.58■□□□□ 0.24
TSG101-208ENST00000543087 TBC1D10BQ4KMP7 808 aaPredicted RBP16.58■□□□□ 0.24
TSG101-208ENST00000543087 DPF2Q92785 391 aa16.58■□□□□ 0.24
TSG101-208ENST00000543087 MPHOSPH8Q99549 860 aa16.58■□□□□ 0.24
TSG101-208ENST00000543087 ABT1Q9ULW3 272 aaKnown RBP16.58■□□□□ 0.24
TSG101-208ENST00000543087 CNTNAP1P78357 1384 aa16.57■□□□□ 0.24
TSG101-208ENST00000543087 CCT4P50991 539 aaKnown RBP16.57■□□□□ 0.24
TSG101-208ENST00000543087 MRPL50Q8N5N7 158 aaKnown RBP16.57■□□□□ 0.24
TSG101-208ENST00000543087 GLIS2Q9BZE0 524 aaPredicted RBP16.57■□□□□ 0.24
TSG101-208ENST00000543087 SRCIN1Q9C0H9 1055 aa16.57■□□□□ 0.24
TSG101-208ENST00000543087 C9orf78Q9NZ63 289 aaPredicted RBP16.57■□□□□ 0.24
TSG101-208ENST00000543087 PSME4Q14997 1843 aa16.56■□□□□ 0.24
TSG101-208ENST00000543087 ANKRD18BA2A2Z9 1011 aa16.56■□□□□ 0.24
TSG101-208ENST00000543087 CCER2I3L3R5 266 aa16.56■□□□□ 0.24
TSG101-208ENST00000543087 GRM8O00222 908 aa16.56■□□□□ 0.24
TSG101-208ENST00000543087 VIL1P09327 827 aaKnown RBP16.56■□□□□ 0.24
TSG101-208ENST00000543087 HSPA1AP0DMV8 641 aaKnown RBP16.56■□□□□ 0.24
TSG101-208ENST00000543087 HSPA1BP0DMV9 641 aaKnown RBP16.56■□□□□ 0.24
TSG101-208ENST00000543087 VEGFBP49765 207 aa16.56■□□□□ 0.24
TSG101-208ENST00000543087 DEFB115Q30KQ5 88 aa16.56■□□□□ 0.24
TSG101-208ENST00000543087 CST9Q5W186 159 aa16.56■□□□□ 0.24
TSG101-208ENST00000543087 LMBR1LQ6UX01 489 aa16.56■□□□□ 0.24
TSG101-208ENST00000543087 EGFRP00533 1210 aa16.55■□□□□ 0.24
TSG101-208ENST00000543087 RPS12P25398 132 aaKnown RBP16.55■□□□□ 0.24
TSG101-208ENST00000543087 IFIT5Q13325 482 aaKnown RBP16.55■□□□□ 0.24
TSG101-208ENST00000543087 EPHA10Q5JZY3 1008 aa16.55■□□□□ 0.24
TSG101-208ENST00000543087 USP48Q86UV5 1035 aa16.55■□□□□ 0.24
TSG101-208ENST00000543087 ZC3H15Q8WU90 426 aaKnown RBP16.55■□□□□ 0.24
TSG101-208ENST00000543087 PGAP2Q9UHJ9 254 aa16.55■□□□□ 0.24
TSG101-208ENST00000543087 ALDH1L1O75891 902 aa16.54■□□□□ 0.24
TSG101-208ENST00000543087 DLK2Q6UY11 383 aa16.54■□□□□ 0.24
TSG101-208ENST00000543087 PAXIP1Q6ZW49 1069 aaPredicted RBP16.54■□□□□ 0.24
TSG101-208ENST00000543087 TXNRD3Q86VQ6 643 aa16.54■□□□□ 0.24
TSG101-208ENST00000543087 HELBQ8NG08 1087 aaPredicted RBP16.54■□□□□ 0.24
TSG101-208ENST00000543087 SSH1Q8WYL5 1049 aa16.54■□□□□ 0.24
TSG101-208ENST00000543087 FBXW7Q969H0 707 aa16.54■□□□□ 0.24
TSG101-208ENST00000543087 ANKRD2Q9GZV1 360 aa16.54■□□□□ 0.24
TSG101-208ENST00000543087 ZNF408Q9H9D4 720 aa16.54■□□□□ 0.24
TSG101-208ENST00000543087 ZNF804BA4D1E1 1349 aa16.53■□□□□ 0.24
TSG101-208ENST00000543087 USP17L3A6NCW0 530 aa16.53■□□□□ 0.24
TSG101-208ENST00000543087 USP17L4A6NCW7 530 aa16.53■□□□□ 0.24
TSG101-208ENST00000543087 CELF2O95319 508 aaKnown RBP16.53■□□□□ 0.24
TSG101-208ENST00000543087 KCNJ4P48050 445 aa16.53■□□□□ 0.24
TSG101-208ENST00000543087 CHRNDQ07001 517 aa16.53■□□□□ 0.24
TSG101-208ENST00000543087 GRM1Q13255 1194 aa16.53■□□□□ 0.24
TSG101-208ENST00000543087 RSBN1LQ6PCB5 846 aaPredicted RBP16.53■□□□□ 0.24
TSG101-208ENST00000543087 CDC37L1Q7L3B6 337 aa16.53■□□□□ 0.24
TSG101-208ENST00000543087 USP17L1Q7RTZ2 530 aa16.53■□□□□ 0.24
TSG101-208ENST00000543087 PODNQ7Z5L7 613 aa16.53■□□□□ 0.24
TSG101-208ENST00000543087 ZNF594Q96JF6 807 aaPredicted RBP16.53■□□□□ 0.24
TSG101-208ENST00000543087 LEMD3Q9Y2U8 911 aa16.53■□□□□ 0.24
TSG101-208ENST00000543087 MED23Q9ULK4 1368 aa16.52■□□□□ 0.24
TSG101-208ENST00000543087 RASSF10A6NK89 507 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms