RNA–Protein interactions for RNA: ENST00000542242.1

DDX11-219, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 795 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-219ENST00000542242 CCDC88AQ3V6T2 1871 aa17.91■□□□□ 0.46
DDX11-219ENST00000542242 PTPN12Q05209 780 aaKnown RBP17.91■□□□□ 0.46
DDX11-219ENST00000542242 SLC10A5Q5PT55 438 aa17.91■□□□□ 0.46
DDX11-219ENST00000542242 KLHDC4Q8TBB5 520 aa17.91■□□□□ 0.46
DDX11-219ENST00000542242 FAM89AQ96GI7 184 aa17.91■□□□□ 0.46
DDX11-219ENST00000542242 SASH1O94885 1247 aa17.9■□□□□ 0.46
DDX11-219ENST00000542242 SRGNP10124 158 aa17.9■□□□□ 0.46
DDX11-219ENST00000542242 SDSP20132 328 aa17.9■□□□□ 0.46
DDX11-219ENST00000542242 MFAP1P55081 439 aaKnown RBP17.9■□□□□ 0.46
DDX11-219ENST00000542242 CRY2Q49AN0 593 aa17.9■□□□□ 0.46
DDX11-219ENST00000542242 ERFEQ4G0M1 354 aa17.9■□□□□ 0.46
DDX11-219ENST00000542242 TSHZ3Q63HK5 1081 aa17.9■□□□□ 0.46
DDX11-219ENST00000542242 TBC1D9Q6ZT07 1266 aa17.9■□□□□ 0.46
DDX11-219ENST00000542242 IFIT2P09913 472 aaKnown RBP17.89■□□□□ 0.45
DDX11-219ENST00000542242 PDE6BP35913 854 aa17.89■□□□□ 0.45
DDX11-219ENST00000542242 ST5P78524 1137 aa17.89■□□□□ 0.45
DDX11-219ENST00000542242 NYXQ9GZU5 481 aa17.89■□□□□ 0.45
DDX11-219ENST00000542242 PIM2Q9P1W9 311 aa17.89■□□□□ 0.45
DDX11-219ENST00000542242 TRMT112Q9UI30 125 aaKnown RBP17.89■□□□□ 0.45
DDX11-219ENST00000542242 COL4A1P02462 1669 aa17.88■□□□□ 0.45
DDX11-219ENST00000542242 EIF5BO60841 1220 aaKnown RBP17.88■□□□□ 0.45
DDX11-219ENST00000542242 C3orf67Q6ZVT6 689 aa17.88■□□□□ 0.45
DDX11-219ENST00000542242 AACSQ86V21 672 aa17.88■□□□□ 0.45
DDX11-219ENST00000542242 C2CD5Q86YS7 1000 aa17.88■□□□□ 0.45
DDX11-219ENST00000542242 SYNE4Q8N205 404 aa17.88■□□□□ 0.45
DDX11-219ENST00000542242 GPATCH3Q96I76 525 aa17.88■□□□□ 0.45
DDX11-219ENST00000542242 SNED1Q8TER0 1413 aa17.88■□□□□ 0.45
DDX11-219ENST00000542242 DICER1Q9UPY3 1922 aaKnown RBP17.88■□□□□ 0.45
DDX11-219ENST00000542242 FAM177BA6PVY3 158 aa17.87■□□□□ 0.45
DDX11-219ENST00000542242 CASC1Q6TDU7 716 aa17.87■□□□□ 0.45
DDX11-219ENST00000542242 DDRGK1Q96HY6 314 aa17.87■□□□□ 0.45
DDX11-219ENST00000542242 IPO9Q96P70 1041 aaKnown RBP17.87■□□□□ 0.45
DDX11-219ENST00000542242 WWC3Q9ULE0 1092 aa17.87■□□□□ 0.45
DDX11-219ENST00000542242 TTC41PQ6P2S7 1318 aa17.87■□□□□ 0.45
DDX11-219ENST00000542242 H0YIN7 160 aa17.86■□□□□ 0.45
DDX11-219ENST00000542242 IRS4O14654 1257 aaPredicted RBP17.86■□□□□ 0.45
DDX11-219ENST00000542242 STYK1Q6J9G0 422 aa17.86■□□□□ 0.45
DDX11-219ENST00000542242 TBC1D32Q96NH3 1257 aa17.86■□□□□ 0.45
DDX11-219ENST00000542242 UTP14AQ9BVJ6 771 aaKnown RBP17.86■□□□□ 0.45
DDX11-219ENST00000542242 TRIM6-TRIM34B2RNG4 842 aa17.85■□□□□ 0.45
DDX11-219ENST00000542242 ERC2O15083 957 aa17.85■□□□□ 0.45
DDX11-219ENST00000542242 PDE8AO60658 829 aa17.85■□□□□ 0.45
DDX11-219ENST00000542242 CSF1RP07333 972 aa17.85■□□□□ 0.45
DDX11-219ENST00000542242 CCDC57Q2TAC2 916 aa17.85■□□□□ 0.45
DDX11-219ENST00000542242 DALRD3Q5D0E6 543 aaKnown RBP17.85■□□□□ 0.45
DDX11-219ENST00000542242 PI4K2BQ8TCG2 481 aa17.85■□□□□ 0.45
DDX11-219ENST00000542242 C7orf43Q8WVR3 580 aa17.85■□□□□ 0.45
DDX11-219ENST00000542242 LRRC37AA6NMS7 1700 aa17.84■□□□□ 0.45
DDX11-219ENST00000542242 SH3TC1Q8TE82 1336 aa17.84■□□□□ 0.45
DDX11-219ENST00000542242 GLRX3O76003 335 aaKnown RBP17.84■□□□□ 0.45
DDX11-219ENST00000542242 HOXA10P31260 410 aaPredicted RBP17.84■□□□□ 0.45
DDX11-219ENST00000542242 CTSWP56202 376 aa17.84■□□□□ 0.45
DDX11-219ENST00000542242 TFCP2Q12800 502 aa17.84■□□□□ 0.45
DDX11-219ENST00000542242 TTLL6Q8N841 843 aa17.84■□□□□ 0.45
DDX11-219ENST00000542242 EAF2Q96CJ1 260 aaPredicted RBP17.84■□□□□ 0.45
DDX11-219ENST00000542242 MASTLQ96GX5 879 aa17.84■□□□□ 0.45
DDX11-219ENST00000542242 ECHDC1Q9NTX5 307 aa17.84■□□□□ 0.45
DDX11-219ENST00000542242 BCS1LQ9Y276 419 aa17.84■□□□□ 0.45
DDX11-219ENST00000542242 EYA2O00167 538 aa17.83■□□□□ 0.44
DDX11-219ENST00000542242 CIAO1O76071 339 aa17.83■□□□□ 0.44
DDX11-219ENST00000542242 IL15P40933 162 aaPredicted RBP17.83■□□□□ 0.44
DDX11-219ENST00000542242 IFIT5Q13325 482 aaKnown RBP17.83■□□□□ 0.44
DDX11-219ENST00000542242 TAF7LQ5H9L4 462 aa17.83■□□□□ 0.44
DDX11-219ENST00000542242 RILPL2Q969X0 211 aa17.83■□□□□ 0.44
DDX11-219ENST00000542242 ZNF594Q96JF6 807 aaPredicted RBP17.83■□□□□ 0.44
DDX11-219ENST00000542242 C22orf23Q9BZE7 217 aa17.83■□□□□ 0.44
DDX11-219ENST00000542242 CCDC8Q9H0W5 538 aaPredicted RBP17.83■□□□□ 0.44
DDX11-219ENST00000542242 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.83■□□□□ 0.44
DDX11-219ENST00000542242 NPR1P16066 1061 aa17.82■□□□□ 0.44
DDX11-219ENST00000542242 TNNI3KQ59H18 835 aa17.82■□□□□ 0.44
DDX11-219ENST00000542242 ATG9AQ7Z3C6 839 aa17.82■□□□□ 0.44
DDX11-219ENST00000542242 TTLL11Q8NHH1 800 aa17.82■□□□□ 0.44
DDX11-219ENST00000542242 CCDC85AQ96PX6 553 aaPredicted RBP17.82■□□□□ 0.44
DDX11-219ENST00000542242 FBXO3Q9UK99 471 aa17.82■□□□□ 0.44
DDX11-219ENST00000542242 FPGT-TNNI3KV9GXZ4 949 aa17.82■□□□□ 0.44
DDX11-219ENST00000542242 HSP90B1P14625 803 aaKnown RBP17.81■□□□□ 0.44
DDX11-219ENST00000542242 CNTROBQ8N137 903 aa17.81■□□□□ 0.44
DDX11-219ENST00000542242 LTBP1Q14766 1721 aa17.81■□□□□ 0.44
DDX11-219ENST00000542242 ANKRD18BA2A2Z9 1011 aa17.8■□□□□ 0.44
DDX11-219ENST00000542242 PRELPP51888 382 aa17.8■□□□□ 0.44
DDX11-219ENST00000542242 LRRC24Q50LG9 513 aa17.8■□□□□ 0.44
DDX11-219ENST00000542242 PRPF40BQ6NWY9 871 aaKnown RBP17.8■□□□□ 0.44
DDX11-219ENST00000542242 CNKSR1Q969H4 720 aa17.8■□□□□ 0.44
DDX11-219ENST00000542242 GPR108Q9NPR9 543 aa17.8■□□□□ 0.44
DDX11-219ENST00000542242 TLR7Q9NYK1 1049 aaKnown RBP17.8■□□□□ 0.44
DDX11-219ENST00000542242 MAP4K4O95819 1239 aaPredicted RBP17.79■□□□□ 0.44
DDX11-219ENST00000542242 HCLS1P14317 486 aaPredicted RBP17.79■□□□□ 0.44
DDX11-219ENST00000542242 ITGA6P23229 1130 aa17.79■□□□□ 0.44
DDX11-219ENST00000542242 APLP1P51693 650 aa17.79■□□□□ 0.44
DDX11-219ENST00000542242 ZNF622Q969S3 477 aaKnown RBP eCLIP17.79■□□□□ 0.443e-6■■□□□ 14.5
DDX11-219ENST00000542242 CRAMP1Q96RY5 1269 aa17.79■□□□□ 0.44
DDX11-219ENST00000542242 PUS3Q9BZE2 481 aaKnown RBP17.79■□□□□ 0.44
DDX11-219ENST00000542242 GREM2Q9H772 168 aa17.79■□□□□ 0.44
DDX11-219ENST00000542242 TIAM2Q8IVF5 1701 aa17.78■□□□□ 0.44
DDX11-219ENST00000542242 NFKBIEO00221 500 aa17.78■□□□□ 0.44
DDX11-219ENST00000542242 NPHP1O15259 732 aa17.78■□□□□ 0.44
DDX11-219ENST00000542242 CHMLP26374 656 aa17.78■□□□□ 0.44
DDX11-219ENST00000542242 GTF2E1P29083 439 aaPredicted RBP17.78■□□□□ 0.44
DDX11-219ENST00000542242 SF3B3Q15393 1217 aaKnown RBP17.78■□□□□ 0.44
DDX11-219ENST00000542242 CEP126Q9P2H0 1117 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms