RNA–Protein interactions for RNA: ENST00000542114.1

COL6A4P2-206, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 5

Gene COL6A4P2, Length 501 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-206ENST00000542114 DCAF5Q96JK2 942 aa7.13□□□□□ -1.27
COL6A4P2-206ENST00000542114 SPACA7Q96KW9 195 aa7.13□□□□□ -1.27
COL6A4P2-206ENST00000542114 LPIN3Q9BQK8 851 aa7.13□□□□□ -1.27
COL6A4P2-206ENST00000542114 SMG9Q9H0W8 520 aaKnown RBP7.13□□□□□ -1.27
COL6A4P2-206ENST00000542114 TMEM63CQ9P1W3 806 aa7.13□□□□□ -1.27
COL6A4P2-206ENST00000542114 A6NHS1 94 aa7.12□□□□□ -1.27
COL6A4P2-206ENST00000542114 FZD6O60353 706 aa7.12□□□□□ -1.27
COL6A4P2-206ENST00000542114 COL8A1P27658 744 aa7.12□□□□□ -1.27
COL6A4P2-206ENST00000542114 EHHADHQ08426 723 aa7.12□□□□□ -1.27
COL6A4P2-206ENST00000542114 PRRT3Q5FWE3 981 aa7.12□□□□□ -1.27
COL6A4P2-206ENST00000542114 XKR5Q6UX68 686 aa7.12□□□□□ -1.27
COL6A4P2-206ENST00000542114 CCDC87Q9NVE4 849 aa7.12□□□□□ -1.27
COL6A4P2-206ENST00000542114 BRPF3Q9ULD4 1205 aa7.12□□□□□ -1.27
COL6A4P2-206ENST00000542114 HOXD8P13378 290 aaPredicted RBP7.11□□□□□ -1.27
COL6A4P2-206ENST00000542114 NID1P14543 1247 aa7.11□□□□□ -1.27
COL6A4P2-206ENST00000542114 AFF1P51825 1210 aaKnown RBP7.11□□□□□ -1.27
COL6A4P2-206ENST00000542114 TRIM28Q13263 835 aaKnown RBP7.11□□□□□ -1.27
COL6A4P2-206ENST00000542114 NCAPG2Q86XI2 1143 aa7.11□□□□□ -1.27
COL6A4P2-206ENST00000542114 KCTD17Q8N5Z5 321 aa7.11□□□□□ -1.27
COL6A4P2-206ENST00000542114 PLD4Q96BZ4 506 aa7.11□□□□□ -1.27
COL6A4P2-206ENST00000542114 CES1P23141 567 aa7.1□□□□□ -1.27
COL6A4P2-206ENST00000542114 COL9A3Q14050 684 aaPredicted RBP7.1□□□□□ -1.27
COL6A4P2-206ENST00000542114 TTC9Q92623 222 aa7.1□□□□□ -1.27
COL6A4P2-206ENST00000542114 PMEPA1Q969W9 287 aa7.1□□□□□ -1.27
COL6A4P2-206ENST00000542114 CNTN3Q9P232 1028 aa7.1□□□□□ -1.27
COL6A4P2-206ENST00000542114 NDUFB5O43674 189 aa7.09□□□□□ -1.27
COL6A4P2-206ENST00000542114 CYP2E1P05181 493 aaPredicted RBP7.09□□□□□ -1.27
COL6A4P2-206ENST00000542114 SPATA31C1P0DKV0 1188 aa7.09□□□□□ -1.27
COL6A4P2-206ENST00000542114 DMRTC2Q8IXT2 367 aaPredicted RBP7.09□□□□□ -1.27
COL6A4P2-206ENST00000542114 C1orf127Q8N9H9 656 aa7.09□□□□□ -1.27
COL6A4P2-206ENST00000542114 TRAIPQ9BWF2 469 aa7.09□□□□□ -1.27
COL6A4P2-206ENST00000542114 BIN2Q9UBW5 565 aaPredicted RBP7.09□□□□□ -1.27
COL6A4P2-206ENST00000542114 FAM229AH3BQW9 127 aa7.08□□□□□ -1.28
COL6A4P2-206ENST00000542114 PHACTR2O75167 634 aa7.08□□□□□ -1.28
COL6A4P2-206ENST00000542114 RAC1P63000 192 aa7.08□□□□□ -1.28
COL6A4P2-206ENST00000542114 ARHGAP4P98171 946 aa7.08□□□□□ -1.28
COL6A4P2-206ENST00000542114 COL13A1Q5TAT6 717 aaPredicted RBP7.08□□□□□ -1.28
COL6A4P2-206ENST00000542114 MSL1Q68DK7 614 aa7.08□□□□□ -1.28
COL6A4P2-206ENST00000542114 GDF6Q6KF10 455 aaPredicted RBP7.08□□□□□ -1.28
COL6A4P2-206ENST00000542114 WFDC8Q8IUA0 241 aa7.08□□□□□ -1.28
COL6A4P2-206ENST00000542114 TMC1Q8TDI8 760 aa7.08□□□□□ -1.28
COL6A4P2-206ENST00000542114 KANSL3Q9P2N6 904 aa7.08□□□□□ -1.28
COL6A4P2-206ENST00000542114 GNEQ9Y223 722 aaKnown RBP7.08□□□□□ -1.28
COL6A4P2-206ENST00000542114 KRBA1A5PL33 1030 aa7.07□□□□□ -1.28
COL6A4P2-206ENST00000542114 SOWAHDA6NJG2 315 aa7.07□□□□□ -1.28
COL6A4P2-206ENST00000542114 TNFRSF21O75509 655 aa7.07□□□□□ -1.28
COL6A4P2-206ENST00000542114 PDIA4P13667 645 aaKnown RBP7.07□□□□□ -1.28
COL6A4P2-206ENST00000542114 KCNA1Q09470 495 aa7.07□□□□□ -1.28
COL6A4P2-206ENST00000542114 PDE3BQ13370 1112 aa7.07□□□□□ -1.28
COL6A4P2-206ENST00000542114 ECM1Q16610 540 aa7.07□□□□□ -1.28
COL6A4P2-206ENST00000542114 PLA2G4EQ3MJ16 856 aa7.07□□□□□ -1.28
COL6A4P2-206ENST00000542114 CEP135Q66GS9 1140 aa7.07□□□□□ -1.28
COL6A4P2-206ENST00000542114 GPAT2Q6NUI2 795 aa7.07□□□□□ -1.28
COL6A4P2-206ENST00000542114 GJD3Q8N144 294 aa7.07□□□□□ -1.28
COL6A4P2-206ENST00000542114 SMNDC1O75940 238 aaKnown RBP eCLIP7.06□□□□□ -1.28
COL6A4P2-206ENST00000542114 KIF4AO95239 1232 aa7.06□□□□□ -1.28
COL6A4P2-206ENST00000542114 APBA3O96018 575 aa7.06□□□□□ -1.28
COL6A4P2-206ENST00000542114 GRIK5Q16478 980 aa7.06□□□□□ -1.28
COL6A4P2-206ENST00000542114 IL22RA1Q8N6P7 574 aa7.06□□□□□ -1.28
COL6A4P2-206ENST00000542114 SNX29Q8TEQ0 813 aa7.06□□□□□ -1.28
COL6A4P2-206ENST00000542114 A0A0A0MRY4 1105 aa7.05□□□□□ -1.28
COL6A4P2-206ENST00000542114 FAM177BA6PVY3 158 aa7.05□□□□□ -1.28
COL6A4P2-206ENST00000542114 NEFLP07196 543 aa7.05□□□□□ -1.28
COL6A4P2-206ENST00000542114 ATP11AP98196 1134 aa7.05□□□□□ -1.28
COL6A4P2-206ENST00000542114 CACTIN-AS1Q8N1I8 211 aa7.05□□□□□ -1.28
COL6A4P2-206ENST00000542114 CEP120Q8N960 986 aa7.05□□□□□ -1.28
COL6A4P2-206ENST00000542114 CITED4Q96RK1 184 aa7.05□□□□□ -1.28
COL6A4P2-206ENST00000542114 RASSF4Q9H2L5 321 aa7.05□□□□□ -1.28
COL6A4P2-206ENST00000542114 SALL4Q9UJQ4 1053 aa7.05□□□□□ -1.28
COL6A4P2-206ENST00000542114 FOXD3Q9UJU5 478 aaPredicted RBP7.05□□□□□ -1.28
COL6A4P2-206ENST00000542114 TRIM33Q9UPN9 1127 aa7.05□□□□□ -1.28
COL6A4P2-206ENST00000542114 IVNS1ABPQ9Y6Y0 642 aa7.05□□□□□ -1.28
COL6A4P2-206ENST00000542114 PATL2C9JE40 543 aaKnown RBP7.04□□□□□ -1.28
COL6A4P2-206ENST00000542114 IGHA1P01876 353 aa7.04□□□□□ -1.28
COL6A4P2-206ENST00000542114 DTWD1Q8N5C7 304 aa7.04□□□□□ -1.28
COL6A4P2-206ENST00000542114 NACC1Q96RE7 527 aa7.04□□□□□ -1.28
COL6A4P2-206ENST00000542114 PBX4Q9BYU1 374 aa7.04□□□□□ -1.28
COL6A4P2-206ENST00000542114 CHRDQ9H2X0 955 aa7.04□□□□□ -1.28
COL6A4P2-206ENST00000542114 C1QTNF9BB2RNN3 333 aa7.03□□□□□ -1.28
COL6A4P2-206ENST00000542114 EREGO14944 169 aa7.03□□□□□ -1.28
COL6A4P2-206ENST00000542114 EDN3P14138 238 aa7.03□□□□□ -1.28
COL6A4P2-206ENST00000542114 ELNP15502 786 aa7.03□□□□□ -1.28
COL6A4P2-206ENST00000542114 GRIK4Q16099 956 aa7.03□□□□□ -1.28
COL6A4P2-206ENST00000542114 LACRTQ9GZZ8 138 aa7.03□□□□□ -1.28
COL6A4P2-206ENST00000542114 AMOTL2Q9Y2J4 779 aa7.03□□□□□ -1.28
COL6A4P2-206ENST00000542114 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.03□□□□□ -1.28
COL6A4P2-206ENST00000542114 MSTNO14793 375 aa7.02□□□□□ -1.29
COL6A4P2-206ENST00000542114 CD163Q86VB7 1156 aa7.02□□□□□ -1.29
COL6A4P2-206ENST00000542114 AEBP1Q8IUX7 1158 aa7.02□□□□□ -1.29
COL6A4P2-206ENST00000542114 FMR1NBQ8N0W7 255 aaPredicted RBP7.02□□□□□ -1.29
COL6A4P2-206ENST00000542114 MUC3BQ9H195 1237 aa7.02□□□□□ -1.29
COL6A4P2-206ENST00000542114 ZFYVE28Q9HCC9 887 aa7.02□□□□□ -1.29
COL6A4P2-206ENST00000542114 PPME1Q9Y570 386 aa7.02□□□□□ -1.29
COL6A4P2-206ENST00000542114 PTPRAP18433 802 aa7.01□□□□□ -1.29
COL6A4P2-206ENST00000542114 CDC27P30260 824 aa7.01□□□□□ -1.29
COL6A4P2-206ENST00000542114 CHRNA4P43681 627 aa7.01□□□□□ -1.29
COL6A4P2-206ENST00000542114 FBXO11Q86XK2 927 aa7.01□□□□□ -1.29
COL6A4P2-206ENST00000542114 POP1Q99575 1024 aaKnown RBP7.01□□□□□ -1.29
COL6A4P2-206ENST00000542114 DZANK1Q9NVP4 752 aa7.01□□□□□ -1.29
COL6A4P2-206ENST00000542114 DCTN4Q9UJW0 460 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms