RNA–Protein interactions for RNA: ENST00000541600.5

EPHA4-214, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 558 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-214ENST00000541600 ARID4AP29374 1257 aaPredicted RBP8.3□□□□□ -1.08
EPHA4-214ENST00000541600 USP17L2Q6R6M4 530 aa8.3□□□□□ -1.08
EPHA4-214ENST00000541600 DNAJC14Q6Y2X3 702 aaPredicted RBP8.3□□□□□ -1.08
EPHA4-214ENST00000541600 USP17L1Q7RTZ2 530 aa8.3□□□□□ -1.08
EPHA4-214ENST00000541600 RETREG3Q86VR2 466 aa8.3□□□□□ -1.08
EPHA4-214ENST00000541600 GAS2L2Q8NHY3 880 aa8.3□□□□□ -1.08
EPHA4-214ENST00000541600 THUMPD2Q9BTF0 503 aaKnown RBP8.3□□□□□ -1.08
EPHA4-214ENST00000541600 LRRC37A3O60309 1634 aa8.29□□□□□ -1.08
EPHA4-214ENST00000541600 FAM196BA6NMK8 535 aa8.29□□□□□ -1.08
EPHA4-214ENST00000541600 ZBBXA8MT70 800 aa8.29□□□□□ -1.08
EPHA4-214ENST00000541600 YBX3P16989 372 aaKnown RBP eCLIP8.29□□□□□ -1.08
EPHA4-214ENST00000541600 KCNK17Q96T54 332 aa8.29□□□□□ -1.08
EPHA4-214ENST00000541600 ZBED2Q9BTP6 218 aa8.29□□□□□ -1.08
EPHA4-214ENST00000541600 N4BP2Q86UW6 1770 aaPredicted RBP8.29□□□□□ -1.08
EPHA4-214ENST00000541600 ATP10DQ9P241 1426 aa8.29□□□□□ -1.08
EPHA4-214ENST00000541600 MAP3K19Q56UN5 1328 aa8.29□□□□□ -1.08
EPHA4-214ENST00000541600 SPATA31A1Q5TZJ5 1347 aa8.29□□□□□ -1.08
EPHA4-214ENST00000541600 PIK3C2AO00443 1686 aa8.28□□□□□ -1.08
EPHA4-214ENST00000541600 USP17L5A8MUK1 530 aa8.28□□□□□ -1.08
EPHA4-214ENST00000541600 CFHP08603 1231 aa8.28□□□□□ -1.08
EPHA4-214ENST00000541600 SKIP12755 728 aa8.28□□□□□ -1.08
EPHA4-214ENST00000541600 HTRA3P83110 453 aa8.28□□□□□ -1.08
EPHA4-214ENST00000541600 GPR162Q16538 588 aa8.28□□□□□ -1.08
EPHA4-214ENST00000541600 HSP90AB2PQ58FF8 381 aa8.28□□□□□ -1.08
EPHA4-214ENST00000541600 ANKRD45Q5TZF3 282 aa8.28□□□□□ -1.08
EPHA4-214ENST00000541600 LYPD8Q6UX82 237 aa8.28□□□□□ -1.08
EPHA4-214ENST00000541600 CLEC17AQ6ZS10 378 aa8.28□□□□□ -1.08
EPHA4-214ENST00000541600 TNS4Q8IZW8 715 aa8.28□□□□□ -1.08
EPHA4-214ENST00000541600 CHMP4AQ9BY43 222 aa8.28□□□□□ -1.08
EPHA4-214ENST00000541600 LNPKQ9C0E8 428 aa8.28□□□□□ -1.08
EPHA4-214ENST00000541600 OSBPL3Q9H4L5 887 aa8.28□□□□□ -1.08
EPHA4-214ENST00000541600 ABCA3Q99758 1704 aa8.28□□□□□ -1.08
EPHA4-214ENST00000541600 PHRF1Q9P1Y6 1649 aaKnown RBP8.28□□□□□ -1.08
EPHA4-214ENST00000541600 CDC45O75419 566 aa8.27□□□□□ -1.09
EPHA4-214ENST00000541600 PTMSP20962 102 aa8.27□□□□□ -1.09
EPHA4-214ENST00000541600 CCT4P50991 539 aaKnown RBP8.27□□□□□ -1.09
EPHA4-214ENST00000541600 NLGN2Q8NFZ4 835 aa8.27□□□□□ -1.09
EPHA4-214ENST00000541600 KIF2CQ99661 725 aa8.27□□□□□ -1.09
EPHA4-214ENST00000541600 RABGEF1Q9UJ41 708 aa8.27□□□□□ -1.09
EPHA4-214ENST00000541600 ISY1Q9ULR0 285 aaKnown RBP8.27□□□□□ -1.09
EPHA4-214ENST00000541600 RGPD8O14715 1765 aaPredicted RBP8.27□□□□□ -1.09
EPHA4-214ENST00000541600 MAP3K5Q99683 1374 aa8.26□□□□□ -1.09
EPHA4-214ENST00000541600 USP17L15C9J2P7 530 aa8.26□□□□□ -1.09
EPHA4-214ENST00000541600 USP17L10C9JJH3 530 aa8.26□□□□□ -1.09
EPHA4-214ENST00000541600 USP17L13C9JLJ4 530 aa8.26□□□□□ -1.09
EPHA4-214ENST00000541600 USP17L12C9JPN9 530 aa8.26□□□□□ -1.09
EPHA4-214ENST00000541600 USP17L11C9JVI0 530 aa8.26□□□□□ -1.09
EPHA4-214ENST00000541600 USP17L21D6R901 530 aa8.26□□□□□ -1.09
EPHA4-214ENST00000541600 USP17L18D6R9N7 530 aa8.26□□□□□ -1.09
EPHA4-214ENST00000541600 USP17L22D6RA61 530 aa8.26□□□□□ -1.09
EPHA4-214ENST00000541600 USP17L17D6RBQ6 530 aa8.26□□□□□ -1.09
EPHA4-214ENST00000541600 USP17L19D6RCP7 530 aa8.26□□□□□ -1.09
EPHA4-214ENST00000541600 USP17L20D6RJB6 530 aa8.26□□□□□ -1.09
EPHA4-214ENST00000541600 EPB41L2O43491 1005 aaKnown RBP8.26□□□□□ -1.09
EPHA4-214ENST00000541600 MCM4P33991 863 aa8.26□□□□□ -1.09
EPHA4-214ENST00000541600 USP17L24Q0WX57 530 aa8.26□□□□□ -1.09
EPHA4-214ENST00000541600 MTHFSDQ2M296 383 aaKnown RBP8.26□□□□□ -1.09
EPHA4-214ENST00000541600 CRTC2Q53ET0 693 aaPredicted RBP8.26□□□□□ -1.09
EPHA4-214ENST00000541600 CEP85Q6P2H3 762 aa8.26□□□□□ -1.09
EPHA4-214ENST00000541600 HSCBQ8IWL3 235 aa8.26□□□□□ -1.09
EPHA4-214ENST00000541600 CLP1Q92989 425 aaKnown RBP8.26□□□□□ -1.09
EPHA4-214ENST00000541600 IL17RAQ96F46 866 aa8.26□□□□□ -1.09
EPHA4-214ENST00000541600 KIAA1522Q9P206 1035 aaPredicted RBP8.26□□□□□ -1.09
EPHA4-214ENST00000541600 PXDNLA1KZ92 1463 aa8.26□□□□□ -1.09
EPHA4-214ENST00000541600 SOWAHDA6NJG2 315 aa8.25□□□□□ -1.09
EPHA4-214ENST00000541600 PLSCR1O15162 318 aa8.25□□□□□ -1.09
EPHA4-214ENST00000541600 HMMRO75330 724 aa8.25□□□□□ -1.09
EPHA4-214ENST00000541600 DCTN1Q14203 1278 aa8.25□□□□□ -1.09
EPHA4-214ENST00000541600 TTC22Q5TAA0 569 aa8.25□□□□□ -1.09
EPHA4-214ENST00000541600 JMYQ8N9B5 988 aa8.25□□□□□ -1.09
EPHA4-214ENST00000541600 FAM174AQ8TBP5 190 aa8.25□□□□□ -1.09
EPHA4-214ENST00000541600 MKRN1Q9UHC7 482 aaKnown RBP8.25□□□□□ -1.09
EPHA4-214ENST00000541600 SEPT9Q9UHD8 586 aaPredicted RBP8.25□□□□□ -1.09
EPHA4-214ENST00000541600 FKBPLQ9UIM3 349 aa8.25□□□□□ -1.09
EPHA4-214ENST00000541600 TNS3Q68CZ2 1445 aa8.25□□□□□ -1.09
EPHA4-214ENST00000541600 ADCY9O60503 1353 aa8.24□□□□□ -1.09
EPHA4-214ENST00000541600 IBTKQ9P2D0 1353 aaPredicted RBP8.24□□□□□ -1.09
EPHA4-214ENST00000541600 NCAPD2Q15021 1401 aa8.24□□□□□ -1.09
EPHA4-214ENST00000541600 ELL2O00472 640 aaPredicted RBP8.24□□□□□ -1.09
EPHA4-214ENST00000541600 HOXB7P09629 217 aa8.24□□□□□ -1.09
EPHA4-214ENST00000541600 PTK7Q13308 1070 aa8.24□□□□□ -1.09
EPHA4-214ENST00000541600 Q3C1V9 767 aa8.24□□□□□ -1.09
EPHA4-214ENST00000541600 NOM1Q5C9Z4 860 aaKnown RBP8.24□□□□□ -1.09
EPHA4-214ENST00000541600 MORN1Q5T089 497 aa8.24□□□□□ -1.09
EPHA4-214ENST00000541600 L1TD1Q5T7N2 865 aaKnown RBP8.24□□□□□ -1.09
EPHA4-214ENST00000541600 DEPDC4Q8N2C3 294 aa8.24□□□□□ -1.09
EPHA4-214ENST00000541600 NGDNQ8NEJ9 315 aaKnown RBP8.24□□□□□ -1.09
EPHA4-214ENST00000541600 RTF1Q92541 710 aaKnown RBP8.24□□□□□ -1.09
EPHA4-214ENST00000541600 MRRFQ96E11 262 aaKnown RBP8.24□□□□□ -1.09
EPHA4-214ENST00000541600 ZC3H4Q9UPT8 1303 aaKnown RBP8.24□□□□□ -1.09
EPHA4-214ENST00000541600 CEMIPQ8WUJ3 1361 aa8.23□□□□□ -1.09
EPHA4-214ENST00000541600 FSD2A1L4K1 749 aa8.23□□□□□ -1.09
EPHA4-214ENST00000541600 GNAT3A8MTJ3 354 aa8.23□□□□□ -1.09
EPHA4-214ENST00000541600 GNAI3P08754 354 aa8.23□□□□□ -1.09
EPHA4-214ENST00000541600 HOXC9P31274 260 aa8.23□□□□□ -1.09
EPHA4-214ENST00000541600 AMPHP49418 695 aa8.23□□□□□ -1.09
EPHA4-214ENST00000541600 RABEP1Q15276 862 aa8.23□□□□□ -1.09
EPHA4-214ENST00000541600 CCDC30Q5VVM6 783 aa8.23□□□□□ -1.09
EPHA4-214ENST00000541600 LARP1Q6PKG0 1096 aaKnown RBP8.23□□□□□ -1.09
EPHA4-214ENST00000541600 MCM10Q7L590 875 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms