RNA–Protein interactions for RNA: ENST00000541496.1

SPARCL1-209, Transcript of SPARC like 1, humanhuman

TSL 2

Gene SPARCL1, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-209ENST00000541496 ADCY9O60503 1353 aa6.33□□□□□ -1.4
SPARCL1-209ENST00000541496 ABCC4O15439 1325 aa6.33□□□□□ -1.4
SPARCL1-209ENST00000541496 PNPLA7Q6ZV29 1317 aa6.33□□□□□ -1.4
SPARCL1-209ENST00000541496 PI4KAP2A4QPH2 592 aa6.33□□□□□ -1.4
SPARCL1-209ENST00000541496 SOCS7O14512 581 aa6.33□□□□□ -1.4
SPARCL1-209ENST00000541496 FECHP22830 423 aa6.33□□□□□ -1.4
SPARCL1-209ENST00000541496 RFC4P35249 363 aa6.33□□□□□ -1.4
SPARCL1-209ENST00000541496 RRP1P56182 461 aaKnown RBP6.33□□□□□ -1.4
SPARCL1-209ENST00000541496 AIMP1Q12904 312 aaKnown RBP6.33□□□□□ -1.4
SPARCL1-209ENST00000541496 HSP90AB3PQ58FF7 597 aa6.33□□□□□ -1.4
SPARCL1-209ENST00000541496 IFFO2Q5TF58 517 aa6.33□□□□□ -1.4
SPARCL1-209ENST00000541496 GIGYF2Q6Y7W6 1299 aaKnown RBP6.33□□□□□ -1.4
SPARCL1-209ENST00000541496 COL23A1Q86Y22 540 aaPredicted RBP6.33□□□□□ -1.4
SPARCL1-209ENST00000541496 PI4KAP1Q8N8J0 262 aa6.33□□□□□ -1.4
SPARCL1-209ENST00000541496 SLC16A10Q8TF71 515 aa6.33□□□□□ -1.4
SPARCL1-209ENST00000541496 DNAAF4Q8WXU2 420 aa6.33□□□□□ -1.4
SPARCL1-209ENST00000541496 METTL22Q9BUU2 404 aaPredicted RBP6.33□□□□□ -1.4
SPARCL1-209ENST00000541496 ZNF652Q9Y2D9 606 aa6.33□□□□□ -1.4
SPARCL1-209ENST00000541496 TJP1Q07157 1748 aa6.33□□□□□ -1.4
SPARCL1-209ENST00000541496 ATP10DQ9P241 1426 aa6.33□□□□□ -1.4
SPARCL1-209ENST00000541496 ITGB4P16144 1822 aa6.32□□□□□ -1.4
SPARCL1-209ENST00000541496 RNF40O75150 1001 aa6.32□□□□□ -1.4
SPARCL1-209ENST00000541496 ZPR1O75312 459 aa6.32□□□□□ -1.4
SPARCL1-209ENST00000541496 GYS1P13807 737 aa6.32□□□□□ -1.4
SPARCL1-209ENST00000541496 CCT4P50991 539 aaKnown RBP6.32□□□□□ -1.4
SPARCL1-209ENST00000541496 TCIRG1Q13488 830 aa6.32□□□□□ -1.4
SPARCL1-209ENST00000541496 BEND3Q5T5X7 828 aa6.32□□□□□ -1.4
SPARCL1-209ENST00000541496 INTS3Q68E01 1043 aaKnown RBP6.32□□□□□ -1.4
SPARCL1-209ENST00000541496 RIC3Q7Z5B4 369 aa6.32□□□□□ -1.4
SPARCL1-209ENST00000541496 DZIP1LQ8IYY4 767 aaKnown RBP6.32□□□□□ -1.4
SPARCL1-209ENST00000541496 LINS1Q8NG48 757 aa6.32□□□□□ -1.4
SPARCL1-209ENST00000541496 FRAT1Q92837 279 aaPredicted RBP6.32□□□□□ -1.4
SPARCL1-209ENST00000541496 ISCA1Q9BUE6 129 aa6.32□□□□□ -1.4
SPARCL1-209ENST00000541496 TBC1D2BQ9UPU7 963 aa6.32□□□□□ -1.4
SPARCL1-209ENST00000541496 MAP3K2Q9Y2U5 619 aa6.32□□□□□ -1.4
SPARCL1-209ENST00000541496 ZNF330Q9Y3S2 320 aaPredicted RBP6.32□□□□□ -1.4
SPARCL1-209ENST00000541496 LY75O60449 1722 aa6.32□□□□□ -1.4
SPARCL1-209ENST00000541496 RREB1Q92766 1687 aa6.32□□□□□ -1.4
SPARCL1-209ENST00000541496 SBF2Q86WG5 1849 aa6.32□□□□□ -1.4
SPARCL1-209ENST00000541496 C4BP0C0L5 1744 aa6.31□□□□□ -1.4
SPARCL1-209ENST00000541496 PXDNLA1KZ92 1463 aa6.31□□□□□ -1.4
SPARCL1-209ENST00000541496 F6X3S4 739 aa6.31□□□□□ -1.4
SPARCL1-209ENST00000541496 IRF6O14896 467 aa6.31□□□□□ -1.4
SPARCL1-209ENST00000541496 ALDH1L1O75891 902 aa6.31□□□□□ -1.4
SPARCL1-209ENST00000541496 RLBP1P12271 317 aa6.31□□□□□ -1.4
SPARCL1-209ENST00000541496 NEXNQ0ZGT2 675 aa6.31□□□□□ -1.4
SPARCL1-209ENST00000541496 HLFQ16534 295 aa6.31□□□□□ -1.4
SPARCL1-209ENST00000541496 FAM161AQ3B820 660 aa6.31□□□□□ -1.4
SPARCL1-209ENST00000541496 PARP10Q53GL7 1025 aa6.31□□□□□ -1.4
SPARCL1-209ENST00000541496 USPL1Q5W0Q7 1092 aa6.31□□□□□ -1.4
SPARCL1-209ENST00000541496 SMIM5Q71RC9 77 aa6.31□□□□□ -1.4
SPARCL1-209ENST00000541496 FTSJ3Q8IY81 847 aaKnown RBP6.31□□□□□ -1.4
SPARCL1-209ENST00000541496 ZNF34Q8IZ26 560 aa6.31□□□□□ -1.4
SPARCL1-209ENST00000541496 NLGN1Q8N2Q7 840 aa6.31□□□□□ -1.4
SPARCL1-209ENST00000541496 CCDC191Q8NCU4 936 aa6.31□□□□□ -1.4
SPARCL1-209ENST00000541496 ZBTB3Q9H5J0 574 aa6.31□□□□□ -1.4
SPARCL1-209ENST00000541496 SRP68Q9UHB9 627 aaKnown RBP6.31□□□□□ -1.4
SPARCL1-209ENST00000541496 SUPT16HQ9Y5B9 1047 aaKnown RBP6.31□□□□□ -1.4
SPARCL1-209ENST00000541496 EP400Q96L91 3159 aa6.3□□□□□ -1.4
SPARCL1-209ENST00000541496 UTYO14607 1347 aa6.3□□□□□ -1.4
SPARCL1-209ENST00000541496 NEURL1BA8MQ27 555 aa6.3□□□□□ -1.4
SPARCL1-209ENST00000541496 PLIN1O60240 522 aa6.3□□□□□ -1.4
SPARCL1-209ENST00000541496 ITGBL1O95965 494 aaPredicted RBP6.3□□□□□ -1.4
SPARCL1-209ENST00000541496 IGKV5-2P06315 115 aa6.3□□□□□ -1.4
SPARCL1-209ENST00000541496 TM4SF1P30408 202 aa6.3□□□□□ -1.4
SPARCL1-209ENST00000541496 NLRP10Q86W26 655 aa6.3□□□□□ -1.4
SPARCL1-209ENST00000541496 SULF1Q8IWU6 871 aa6.3□□□□□ -1.4
SPARCL1-209ENST00000541496 ZC3H15Q8WU90 426 aaKnown RBP6.3□□□□□ -1.4
SPARCL1-209ENST00000541496 SRCIN1Q9C0H9 1055 aa6.3□□□□□ -1.4
SPARCL1-209ENST00000541496 DAXXQ9UER7 740 aaPredicted RBP6.3□□□□□ -1.4
SPARCL1-209ENST00000541496 UBN2Q6ZU65 1347 aa6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 LAMB4A4D0S4 1761 aa6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 ZMYND10O75800 440 aa6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 COL5A3P25940 1745 aaPredicted RBP6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 AAMPQ13685 434 aa6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 GCKRQ14397 625 aa6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 MVPQ14764 893 aaKnown RBP6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 NFIXQ14938 502 aa6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 R3HDM1Q15032 1099 aaKnown RBP6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 KMT5BQ4FZB7 885 aa6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 C20orf194Q5TEA3 1177 aa6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 TBC1D9BQ66K14 1250 aa6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 SLC4A10Q6U841 1118 aa6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 TMEM57Q8N5G2 664 aa6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 ZBTB38Q8NAP3 1195 aaPredicted RBP6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 PANK1Q8TE04 598 aa6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 CLUAP1Q96AJ1 413 aa6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 ARXQ96QS3 562 aa6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 SETDB2Q96T68 719 aa6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 MYD88Q99836 296 aa6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 IRX2Q9BZI1 471 aaPredicted RBP6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 CHMP4BQ9H444 224 aaKnown RBP6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 CWC25Q9NXE8 425 aaPredicted RBP6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 DDX19BQ9UMR2 479 aa6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 TNNQ9UQP3 1299 aa6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 NIP7Q9Y221 180 aaKnown RBP eCLIP6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 CARMIL3Q8ND23 1372 aa6.29□□□□□ -1.4
SPARCL1-209ENST00000541496 ATP5J2-PTCD1G3V325 749 aa6.28□□□□□ -1.4
SPARCL1-209ENST00000541496 H7C1W4 665 aa6.28□□□□□ -1.4
SPARCL1-209ENST00000541496 GRM8O00222 908 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms