RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 CLP1Q92989 425 aaKnown RBP9.21□□□□□ -0.94
SUDS3-202ENST00000541280 DNAJB12Q9NXW2 375 aaKnown RBP9.21□□□□□ -0.94
SUDS3-202ENST00000541280 PLEKHD1A6NEE1 506 aa9.2□□□□□ -0.94
SUDS3-202ENST00000541280 LILRB5O75023 590 aa9.2□□□□□ -0.94
SUDS3-202ENST00000541280 ADAM23O75077 832 aa9.2□□□□□ -0.94
SUDS3-202ENST00000541280 RANGAP1P46060 587 aaPredicted RBP9.2□□□□□ -0.94
SUDS3-202ENST00000541280 PCSK7Q16549 785 aa9.2□□□□□ -0.94
SUDS3-202ENST00000541280 PRRT3Q5FWE3 981 aa9.2□□□□□ -0.94
SUDS3-202ENST00000541280 CCDC97Q96F63 343 aaPredicted RBP9.2□□□□□ -0.94
SUDS3-202ENST00000541280 NAGPAQ9UK23 515 aa9.2□□□□□ -0.94
SUDS3-202ENST00000541280 PTCD1O75127 700 aaKnown RBP9.19□□□□□ -0.94
SUDS3-202ENST00000541280 C16orf46Q6P387 395 aa9.19□□□□□ -0.94
SUDS3-202ENST00000541280 TREML1Q86YW5 311 aa9.19□□□□□ -0.94
SUDS3-202ENST00000541280 TRPM4Q8TD43 1214 aa9.19□□□□□ -0.94
SUDS3-202ENST00000541280 ZFATQ9P243 1243 aa9.19□□□□□ -0.94
SUDS3-202ENST00000541280 FRRS1LQ9P0K9 344 aa9.18□□□□□ -0.94
SUDS3-202ENST00000541280 CDK11AQ9UQ88 783 aaPredicted RBP9.18□□□□□ -0.94
SUDS3-202ENST00000541280 RTCBQ9Y3I0 505 aaKnown RBP9.18□□□□□ -0.94
SUDS3-202ENST00000541280 EPRSP07814 1512 aaKnown RBP9.17□□□□□ -0.94
SUDS3-202ENST00000541280 WDR7Q9Y4E6 1490 aa9.17□□□□□ -0.94
SUDS3-202ENST00000541280 GPLD1P80108 840 aa9.17□□□□□ -0.94
SUDS3-202ENST00000541280 DHX32Q7L7V1 743 aaKnown RBP9.17□□□□□ -0.94
SUDS3-202ENST00000541280 SAP130Q9H0E3 1048 aa9.17□□□□□ -0.94
SUDS3-202ENST00000541280 GLI2P10070 1586 aa9.16□□□□□ -0.94
SUDS3-202ENST00000541280 PHLDB1Q86UU1 1377 aa9.16□□□□□ -0.94
SUDS3-202ENST00000541280 TNFRSF10BO14763 440 aa9.16□□□□□ -0.94
SUDS3-202ENST00000541280 BRD2P25440 801 aaKnown RBP9.16□□□□□ -0.94
SUDS3-202ENST00000541280 TBC1D8BQ0IIM8 1120 aa9.16□□□□□ -0.94
SUDS3-202ENST00000541280 ETFBKMTQ8IXQ9 262 aa9.16□□□□□ -0.94
SUDS3-202ENST00000541280 JPH1Q9HDC5 661 aaPredicted RBP9.16□□□□□ -0.94
SUDS3-202ENST00000541280 SLAIN2Q9P270 581 aa9.16□□□□□ -0.94
SUDS3-202ENST00000541280 KCNMB2Q9Y691 235 aa9.16□□□□□ -0.94
SUDS3-202ENST00000541280 KIF21BO75037 1637 aa9.16□□□□□ -0.94
SUDS3-202ENST00000541280 ABCA8O94911 1581 aa9.16□□□□□ -0.94
SUDS3-202ENST00000541280 ATP10BO94823 1461 aa9.15□□□□□ -0.94
SUDS3-202ENST00000541280 TEX14Q8IWB6 1497 aa9.15□□□□□ -0.94
SUDS3-202ENST00000541280 CD109Q6YHK3 1445 aa9.15□□□□□ -0.94
SUDS3-202ENST00000541280 ZBTB42B2RXF5 422 aa9.15□□□□□ -0.94
SUDS3-202ENST00000541280 RARAP10276 462 aa9.15□□□□□ -0.94
SUDS3-202ENST00000541280 HOXD8P13378 290 aaPredicted RBP9.15□□□□□ -0.94
SUDS3-202ENST00000541280 TARSP26639 723 aaKnown RBP9.15□□□□□ -0.94
SUDS3-202ENST00000541280 AFF1P51825 1210 aaKnown RBP9.15□□□□□ -0.94
SUDS3-202ENST00000541280 TRIM28Q13263 835 aaKnown RBP9.15□□□□□ -0.94
SUDS3-202ENST00000541280 PSAPL1Q6NUJ1 521 aa9.15□□□□□ -0.94
SUDS3-202ENST00000541280 TTC9Q92623 222 aa9.15□□□□□ -0.94
SUDS3-202ENST00000541280 IGFLR1Q9H665 355 aa9.15□□□□□ -0.94
SUDS3-202ENST00000541280 DIP2BQ9P265 1576 aa9.15□□□□□ -0.95
SUDS3-202ENST00000541280 FMN1Q68DA7 1419 aa9.14□□□□□ -0.95
SUDS3-202ENST00000541280 K7ELQ4 463 aaPredicted RBP9.14□□□□□ -0.95
SUDS3-202ENST00000541280 NRLP54845 237 aa9.14□□□□□ -0.95
SUDS3-202ENST00000541280 NACC1Q96RE7 527 aa9.14□□□□□ -0.95
SUDS3-202ENST00000541280 LPIN3Q9BQK8 851 aa9.14□□□□□ -0.95
SUDS3-202ENST00000541280 EFCAB5A4FU69 1503 aa9.14□□□□□ -0.95
SUDS3-202ENST00000541280 ARID3CA6NKF2 412 aa9.13□□□□□ -0.95
SUDS3-202ENST00000541280 XYLBO75191 536 aa9.13□□□□□ -0.95
SUDS3-202ENST00000541280 SASH3O75995 380 aa9.13□□□□□ -0.95
SUDS3-202ENST00000541280 APBA3O96018 575 aa9.13□□□□□ -0.95
SUDS3-202ENST00000541280 ARID4AP29374 1257 aaPredicted RBP9.13□□□□□ -0.95
SUDS3-202ENST00000541280 GRIK5Q16478 980 aa9.13□□□□□ -0.95
SUDS3-202ENST00000541280 CAPN12Q6ZSI9 719 aa9.13□□□□□ -0.95
SUDS3-202ENST00000541280 KRT25Q7Z3Z0 450 aa9.13□□□□□ -0.95
SUDS3-202ENST00000541280 RGL4Q8IZJ4 473 aa9.13□□□□□ -0.95
SUDS3-202ENST00000541280 NUDT8Q8WV74 236 aa9.13□□□□□ -0.95
SUDS3-202ENST00000541280 TLR7Q9NYK1 1049 aaKnown RBP9.13□□□□□ -0.95
SUDS3-202ENST00000541280 FHOD3Q2V2M9 1422 aa9.13□□□□□ -0.95
SUDS3-202ENST00000541280 A0A0A0MRY4 1105 aa9.12□□□□□ -0.95
SUDS3-202ENST00000541280 FAM229AH3BQW9 127 aa9.12□□□□□ -0.95
SUDS3-202ENST00000541280 RGS9O75916 674 aaPredicted RBP9.12□□□□□ -0.95
SUDS3-202ENST00000541280 SOX18P35713 384 aa9.12□□□□□ -0.95
SUDS3-202ENST00000541280 GATA4P43694 442 aa9.12□□□□□ -0.95
SUDS3-202ENST00000541280 FAM26DQ5JW98 314 aa9.12□□□□□ -0.95
SUDS3-202ENST00000541280 PERM1Q5SV97 790 aa9.12□□□□□ -0.95
SUDS3-202ENST00000541280 FAM35AQ86V20 835 aa9.12□□□□□ -0.95
SUDS3-202ENST00000541280 USP20Q9Y2K6 914 aa9.12□□□□□ -0.95
SUDS3-202ENST00000541280 MAGI3Q5TCQ9 1506 aa9.11□□□□□ -0.95
SUDS3-202ENST00000541280 CTTNBP2Q8WZ74 1663 aa9.11□□□□□ -0.95
SUDS3-202ENST00000541280 ELNP15502 786 aa9.11□□□□□ -0.95
SUDS3-202ENST00000541280 TRAPPC3LQ5T215 181 aa9.11□□□□□ -0.95
SUDS3-202ENST00000541280 MKNK1Q9BUB5 465 aa9.11□□□□□ -0.95
SUDS3-202ENST00000541280 FAM13BQ9NYF5 915 aa9.11□□□□□ -0.95
SUDS3-202ENST00000541280 SAMD9Q5K651 1589 aa9.11□□□□□ -0.95
SUDS3-202ENST00000541280 FURINP09958 794 aa9.1□□□□□ -0.95
SUDS3-202ENST00000541280 CPB1P15086 417 aa9.1□□□□□ -0.95
SUDS3-202ENST00000541280 CMTR1Q8N1G2 835 aaKnown RBP9.1□□□□□ -0.95
SUDS3-202ENST00000541280 DTWD1Q8N5C7 304 aa9.1□□□□□ -0.95
SUDS3-202ENST00000541280 C9orf172C9J069 976 aa9.09□□□□□ -0.95
SUDS3-202ENST00000541280 ATP2B4P23634 1241 aa9.09□□□□□ -0.95
SUDS3-202ENST00000541280 RAC1P63000 192 aa9.09□□□□□ -0.95
SUDS3-202ENST00000541280 TRIP4Q15650 581 aaPredicted RBP9.09□□□□□ -0.95
SUDS3-202ENST00000541280 MSL1Q68DK7 614 aa9.09□□□□□ -0.95
SUDS3-202ENST00000541280 FMR1NBQ8N0W7 255 aaPredicted RBP9.09□□□□□ -0.95
SUDS3-202ENST00000541280 STIM2Q9P246 746 aa9.09□□□□□ -0.95
SUDS3-202ENST00000541280 NUP153P49790 1475 aaKnown RBP9.08□□□□□ -0.96
SUDS3-202ENST00000541280 PPP1R15AO75807 674 aaPredicted RBP9.08□□□□□ -0.96
SUDS3-202ENST00000541280 PLAURQ03405 335 aa9.08□□□□□ -0.96
SUDS3-202ENST00000541280 NAA30Q147X3 362 aaPredicted RBP9.08□□□□□ -0.96
SUDS3-202ENST00000541280 GRIK4Q16099 956 aa9.08□□□□□ -0.96
SUDS3-202ENST00000541280 ELMSAN1Q6PJG2 1045 aa9.08□□□□□ -0.96
SUDS3-202ENST00000541280 NLRP13Q86W25 1043 aa9.08□□□□□ -0.96
SUDS3-202ENST00000541280 CCDC82Q8N4S0 544 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms