RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 DNAJC5GQ8N7S2 189 aa18.03■□□□□ 0.48
LTBR-209ENST00000541102 PLA2G12BQ9BX93 195 aa18.03■□□□□ 0.48
LTBR-209ENST00000541102 ZC3H12CQ9C0D7 883 aaKnown RBP18.03■□□□□ 0.48
LTBR-209ENST00000541102 GGA1Q9UJY5 639 aa18.03■□□□□ 0.48
LTBR-209ENST00000541102 DUOX1Q9NRD9 1551 aa18.03■□□□□ 0.48
LTBR-209ENST00000541102 LRRC37AA6NMS7 1700 aa18.02■□□□□ 0.48
LTBR-209ENST00000541102 YDJCA8MPS7 323 aa18.02■□□□□ 0.48
LTBR-209ENST00000541102 G3V3G9 751 aa18.02■□□□□ 0.48
LTBR-209ENST00000541102 BCAR3O75815 825 aa18.02■□□□□ 0.48
LTBR-209ENST00000541102 CT47B1P0C2W7 299 aaPredicted RBP18.02■□□□□ 0.48
LTBR-209ENST00000541102 GMPSP49915 693 aaPredicted RBP18.02■□□□□ 0.48
LTBR-209ENST00000541102 DCAF8Q5TAQ9 597 aa18.02■□□□□ 0.48
LTBR-209ENST00000541102 SMC4Q9NTJ3 1288 aa18.02■□□□□ 0.48
LTBR-209ENST00000541102 PODXL2Q9NZ53 605 aa18.02■□□□□ 0.48
LTBR-209ENST00000541102 ALDH1L2Q3SY69 923 aa18.01■□□□□ 0.47
LTBR-209ENST00000541102 C9orf78Q9NZ63 289 aaPredicted RBP18.01■□□□□ 0.47
LTBR-209ENST00000541102 CHMP3Q9Y3E7 222 aa18.01■□□□□ 0.47
LTBR-209ENST00000541102 XDHP47989 1333 aa18■□□□□ 0.47
LTBR-209ENST00000541102 ECE2O60344 883 aa18■□□□□ 0.47
LTBR-209ENST00000541102 CSF1RP07333 972 aa18■□□□□ 0.47
LTBR-209ENST00000541102 ITGA6P23229 1130 aa18■□□□□ 0.47
LTBR-209ENST00000541102 IGHMBP2P38935 993 aaKnown RBP18■□□□□ 0.47
LTBR-209ENST00000541102 FAM161AQ3B820 660 aa18■□□□□ 0.47
LTBR-209ENST00000541102 MAP1SQ66K74 1059 aaPredicted RBP18■□□□□ 0.47
LTBR-209ENST00000541102 SRCIN1Q9C0H9 1055 aa18■□□□□ 0.47
LTBR-209ENST00000541102 KCNQ5Q9NR82 932 aa18■□□□□ 0.47
LTBR-209ENST00000541102 BSDC1Q9NW68 430 aaPredicted RBP18■□□□□ 0.47
LTBR-209ENST00000541102 GPRC5DQ9NZD1 345 aa18■□□□□ 0.47
LTBR-209ENST00000541102 MINPP1Q9UNW1 487 aa18■□□□□ 0.47
LTBR-209ENST00000541102 RTL9Q8NET4 1388 aa18■□□□□ 0.47
LTBR-209ENST00000541102 CEP350Q5VT06 3117 aa18■□□□□ 0.47
LTBR-209ENST00000541102 GRM8O00222 908 aa17.99■□□□□ 0.47
LTBR-209ENST00000541102 CNTROBQ8N137 903 aa17.99■□□□□ 0.47
LTBR-209ENST00000541102 WTIPA6NIX2 430 aaPredicted RBP17.98■□□□□ 0.47
LTBR-209ENST00000541102 PSMD14O00487 310 aa17.98■□□□□ 0.47
LTBR-209ENST00000541102 ALDH1L1O75891 902 aa17.98■□□□□ 0.47
LTBR-209ENST00000541102 ITGBL1O95965 494 aaPredicted RBP17.98■□□□□ 0.47
LTBR-209ENST00000541102 ATP2B4P23634 1241 aa17.98■□□□□ 0.47
LTBR-209ENST00000541102 FOXO4P98177 505 aa17.98■□□□□ 0.47
LTBR-209ENST00000541102 USP50Q70EL3 339 aaPredicted RBP17.98■□□□□ 0.47
LTBR-209ENST00000541102 KLRG1Q96E93 195 aa17.98■□□□□ 0.47
LTBR-209ENST00000541102 MPHOSPH8Q99549 860 aa17.98■□□□□ 0.47
LTBR-209ENST00000541102 ADARB2Q9NS39 739 aaKnown RBP17.98■□□□□ 0.47
LTBR-209ENST00000541102 NOB1Q9ULX3 412 aaKnown RBP17.98■□□□□ 0.47
LTBR-209ENST00000541102 TNNQ9UQP3 1299 aa17.98■□□□□ 0.47
LTBR-209ENST00000541102 ZBTB12Q9Y330 459 aaPredicted RBP17.98■□□□□ 0.47
LTBR-209ENST00000541102 MYH3P11055 1940 aa17.98■□□□□ 0.47
LTBR-209ENST00000541102 LTBP1Q14766 1721 aa17.98■□□□□ 0.47
LTBR-209ENST00000541102 ANKRD18BA2A2Z9 1011 aa17.97■□□□□ 0.47
LTBR-209ENST00000541102 EPHA10Q5JZY3 1008 aa17.97■□□□□ 0.47
LTBR-209ENST00000541102 LMBR1LQ6UX01 489 aa17.97■□□□□ 0.47
LTBR-209ENST00000541102 CNOT7Q9UIV1 285 aaKnown RBP17.97■□□□□ 0.47
LTBR-209ENST00000541102 SHTN1A0MZ66 631 aa17.96■□□□□ 0.47
LTBR-209ENST00000541102 BRPF1P55201 1214 aaPredicted RBP17.96■□□□□ 0.47
LTBR-209ENST00000541102 IFIT5Q13325 482 aaKnown RBP17.96■□□□□ 0.47
LTBR-209ENST00000541102 PASKQ96RG2 1323 aa17.96■□□□□ 0.46
LTBR-209ENST00000541102 H7C1D1 291 aa17.95■□□□□ 0.46
LTBR-209ENST00000541102 CCT4P50991 539 aaKnown RBP17.95■□□□□ 0.46
LTBR-209ENST00000541102 PTPRCP08575 1304 aa17.95■□□□□ 0.46
LTBR-209ENST00000541102 MICALL2Q8IY33 904 aa17.94■□□□□ 0.46
LTBR-209ENST00000541102 ANKRD2Q9GZV1 360 aa17.94■□□□□ 0.46
LTBR-209ENST00000541102 CREBZFQ9NS37 354 aa17.94■□□□□ 0.46
LTBR-209ENST00000541102 SPEF2Q9C093 1822 aa17.93■□□□□ 0.46
LTBR-209ENST00000541102 NBPF7P0C2Y1 421 aaPredicted RBP17.93■□□□□ 0.46
LTBR-209ENST00000541102 CCDC57Q2TAC2 916 aa17.93■□□□□ 0.46
LTBR-209ENST00000541102 TRPM4Q8TD43 1214 aa17.93■□□□□ 0.46
LTBR-209ENST00000541102 DPF2Q92785 391 aa17.93■□□□□ 0.46
LTBR-209ENST00000541102 SUCLG2Q96I99 432 aa17.93■□□□□ 0.46
LTBR-209ENST00000541102 ZNF594Q96JF6 807 aaPredicted RBP17.93■□□□□ 0.46
LTBR-209ENST00000541102 MKRN1Q9UHC7 482 aaKnown RBP17.93■□□□□ 0.46
LTBR-209ENST00000541102 ADAMTSL1Q8N6G6 1762 aa17.92■□□□□ 0.46
LTBR-209ENST00000541102 TMEM88BA6NKF7 163 aa17.92■□□□□ 0.46
LTBR-209ENST00000541102 KCNJ4P48050 445 aa17.92■□□□□ 0.46
LTBR-209ENST00000541102 HIRAP54198 1017 aaPredicted RBP17.92■□□□□ 0.46
LTBR-209ENST00000541102 FMR1Q06787 632 aaKnown RBP eCLIP17.92■□□□□ 0.46
LTBR-209ENST00000541102 CHRNDQ07001 517 aa17.92■□□□□ 0.46
LTBR-209ENST00000541102 TAF7LQ5H9L4 462 aa17.92■□□□□ 0.46
LTBR-209ENST00000541102 RBM26Q5T8P6 1007 aaKnown RBP17.92■□□□□ 0.46
LTBR-209ENST00000541102 SAMD7Q7Z3H4 446 aa17.92■□□□□ 0.46
LTBR-209ENST00000541102 HELBQ8NG08 1087 aaPredicted RBP17.92■□□□□ 0.46
LTBR-209ENST00000541102 FRAT1Q92837 279 aaPredicted RBP17.92■□□□□ 0.46
LTBR-209ENST00000541102 RCAN3Q9UKA8 241 aa17.92■□□□□ 0.46
LTBR-209ENST00000541102 LEMD3Q9Y2U8 911 aa17.92■□□□□ 0.46
LTBR-209ENST00000541102 ZNF804BA4D1E1 1349 aa17.92■□□□□ 0.46
LTBR-209ENST00000541102 TAF5LO75529 589 aa17.91■□□□□ 0.46
LTBR-209ENST00000541102 VIL1P09327 827 aaKnown RBP17.91■□□□□ 0.46
LTBR-209ENST00000541102 RPS12P25398 132 aaKnown RBP17.91■□□□□ 0.46
LTBR-209ENST00000541102 TBC1D10BQ4KMP7 808 aaPredicted RBP17.91■□□□□ 0.46
LTBR-209ENST00000541102 PODNQ7Z5L7 613 aa17.91■□□□□ 0.46
LTBR-209ENST00000541102 TRAF5O00463 557 aa17.9■□□□□ 0.46
LTBR-209ENST00000541102 PLIN1O60240 522 aa17.9■□□□□ 0.46
LTBR-209ENST00000541102 TXNRD3Q86VQ6 643 aa17.9■□□□□ 0.46
LTBR-209ENST00000541102 FBXW7Q969H0 707 aa17.9■□□□□ 0.46
LTBR-209ENST00000541102 KAZALD1Q96I82 304 aa17.9■□□□□ 0.46
LTBR-209ENST00000541102 CNNM1Q9NRU3 951 aa17.9■□□□□ 0.46
LTBR-209ENST00000541102 MED23Q9ULK4 1368 aa17.9■□□□□ 0.46
LTBR-209ENST00000541102 USP17L3A6NCW0 530 aa17.89■□□□□ 0.45
LTBR-209ENST00000541102 USP17L4A6NCW7 530 aa17.89■□□□□ 0.45
LTBR-209ENST00000541102 SNAP23O00161 211 aa17.89■□□□□ 0.45
LTBR-209ENST00000541102 TRIM27P14373 513 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms