RNA–Protein interactions for RNA: ENST00000540935.5

DDX11-217, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-217ENST00000540935 RIMBP2O15034 1052 aa18.88■□□□□ 0.61
DDX11-217ENST00000540935 PLA2G12BQ9BX93 195 aa18.88■□□□□ 0.61
DDX11-217ENST00000540935 DBNDD1Q9H9R9 158 aa18.88■□□□□ 0.61
DDX11-217ENST00000540935 ECE2O60344 883 aa18.87■□□□□ 0.61
DDX11-217ENST00000540935 UFL1O94874 794 aa18.87■□□□□ 0.61
DDX11-217ENST00000540935 XDHP47989 1333 aa18.87■□□□□ 0.61
DDX11-217ENST00000540935 DPF2Q92785 391 aa18.87■□□□□ 0.61
DDX11-217ENST00000540935 CNTNAP1P78357 1384 aa18.86■□□□□ 0.61
DDX11-217ENST00000540935 ZNF521Q96K83 1311 aa18.86■□□□□ 0.61
DDX11-217ENST00000540935 G3V3G9 751 aa18.86■□□□□ 0.61
DDX11-217ENST00000540935 H7C1D1 291 aa18.86■□□□□ 0.61
DDX11-217ENST00000540935 RPS12P25398 132 aaKnown RBP18.86■□□□□ 0.61
DDX11-217ENST00000540935 DCAF8Q5TAQ9 597 aa18.86■□□□□ 0.61
DDX11-217ENST00000540935 ZC3H15Q8WU90 426 aaKnown RBP18.86■□□□□ 0.61
DDX11-217ENST00000540935 BSDC1Q9NW68 430 aaPredicted RBP18.86■□□□□ 0.61
DDX11-217ENST00000540935 MKRN1Q9UHC7 482 aaKnown RBP18.86■□□□□ 0.61
DDX11-217ENST00000540935 PSMD14O00487 310 aa18.85■□□□□ 0.61
DDX11-217ENST00000540935 ATP2B4P23634 1241 aa18.85■□□□□ 0.61
DDX11-217ENST00000540935 GREM2Q9H772 168 aa18.85■□□□□ 0.61
DDX11-217ENST00000540935 CNOT7Q9UIV1 285 aaKnown RBP18.85■□□□□ 0.61
DDX11-217ENST00000540935 DOK7Q18PE1 504 aa18.84■□□□□ 0.61
DDX11-217ENST00000540935 PGAP2Q9UHJ9 254 aa18.84■□□□□ 0.61
DDX11-217ENST00000540935 IGHMBP2P38935 993 aaKnown RBP18.83■□□□□ 0.6
DDX11-217ENST00000540935 CASP7P55210 303 aa18.83■□□□□ 0.6
DDX11-217ENST00000540935 MICALL2Q8IY33 904 aa18.83■□□□□ 0.6
DDX11-217ENST00000540935 RASSF10A6NK89 507 aa18.82■□□□□ 0.6
DDX11-217ENST00000540935 CSF1RP07333 972 aa18.82■□□□□ 0.6
DDX11-217ENST00000540935 BEND3Q5T5X7 828 aa18.82■□□□□ 0.6
DDX11-217ENST00000540935 GPR101Q96P66 508 aaPredicted RBP18.82■□□□□ 0.6
DDX11-217ENST00000540935 MINPP1Q9UNW1 487 aa18.82■□□□□ 0.6
DDX11-217ENST00000540935 ZBTB12Q9Y330 459 aaPredicted RBP18.82■□□□□ 0.6
DDX11-217ENST00000540935 VIL1P09327 827 aaKnown RBP18.81■□□□□ 0.6
DDX11-217ENST00000540935 HSPA1AP0DMV8 641 aaKnown RBP18.81■□□□□ 0.6
DDX11-217ENST00000540935 HSPA1BP0DMV9 641 aaKnown RBP18.81■□□□□ 0.6
DDX11-217ENST00000540935 ITGA6P23229 1130 aa18.81■□□□□ 0.6
DDX11-217ENST00000540935 DEFB115Q30KQ5 88 aa18.81■□□□□ 0.6
DDX11-217ENST00000540935 IFFO2Q5TF58 517 aa18.81■□□□□ 0.6
DDX11-217ENST00000540935 PODNQ7Z5L7 613 aa18.81■□□□□ 0.6
DDX11-217ENST00000540935 ABT1Q9ULW3 272 aaKnown RBP18.81■□□□□ 0.6
DDX11-217ENST00000540935 TRPM7Q96QT4 1865 aa18.8■□□□□ 0.6
DDX11-217ENST00000540935 E9PSI1 815 aa18.8■□□□□ 0.6
DDX11-217ENST00000540935 F6X3S4 739 aa18.8■□□□□ 0.6
DDX11-217ENST00000540935 HIRAP54198 1017 aaPredicted RBP18.8■□□□□ 0.6
DDX11-217ENST00000540935 TRPM4Q8TD43 1214 aa18.8■□□□□ 0.6
DDX11-217ENST00000540935 MPHOSPH8Q99549 860 aa18.8■□□□□ 0.6
DDX11-217ENST00000540935 ZNF609O15014 1411 aa18.8■□□□□ 0.6
DDX11-217ENST00000540935 MED23Q9ULK4 1368 aa18.8■□□□□ 0.6
DDX11-217ENST00000540935 CCT4P50991 539 aaKnown RBP18.79■□□□□ 0.6
DDX11-217ENST00000540935 FAM161AQ3B820 660 aa18.79■□□□□ 0.6
DDX11-217ENST00000540935 CDC37L1Q7L3B6 337 aa18.79■□□□□ 0.6
DDX11-217ENST00000540935 ANKRD2Q9GZV1 360 aa18.79■□□□□ 0.6
DDX11-217ENST00000540935 KCNQ5Q9NR82 932 aa18.79■□□□□ 0.6
DDX11-217ENST00000540935 LEMD3Q9Y2U8 911 aa18.79■□□□□ 0.6
DDX11-217ENST00000540935 SPEF2Q9C093 1822 aa18.79■□□□□ 0.6
DDX11-217ENST00000540935 ANKRD18BA2A2Z9 1011 aa18.78■□□□□ 0.6
DDX11-217ENST00000540935 TRAF5O00463 557 aa18.78■□□□□ 0.6
DDX11-217ENST00000540935 ALDH1L1O75891 902 aa18.78■□□□□ 0.6
DDX11-217ENST00000540935 VEGFBP49765 207 aa18.78■□□□□ 0.6
DDX11-217ENST00000540935 AGBL3Q8NEM8 1001 aa18.78■□□□□ 0.6
DDX11-217ENST00000540935 SCN9AQ15858 1988 aa18.78■□□□□ 0.6
DDX11-217ENST00000540935 PSME4Q14997 1843 aa18.77■□□□□ 0.6
DDX11-217ENST00000540935 SHTN1A0MZ66 631 aa18.77■□□□□ 0.6
DDX11-217ENST00000540935 CCER2I3L3R5 266 aa18.77■□□□□ 0.6
DDX11-217ENST00000540935 GRM8O00222 908 aa18.77■□□□□ 0.6
DDX11-217ENST00000540935 CST9Q5W186 159 aa18.77■□□□□ 0.6
DDX11-217ENST00000540935 SAMD7Q7Z3H4 446 aa18.77■□□□□ 0.6
DDX11-217ENST00000540935 USP17L3A6NCW0 530 aa18.76■□□□□ 0.59
DDX11-217ENST00000540935 USP17L4A6NCW7 530 aa18.76■□□□□ 0.59
DDX11-217ENST00000540935 FOXO4P98177 505 aa18.76■□□□□ 0.59
DDX11-217ENST00000540935 IFIT5Q13325 482 aaKnown RBP18.76■□□□□ 0.59
DDX11-217ENST00000540935 RSBN1LQ6PCB5 846 aaPredicted RBP18.76■□□□□ 0.59
DDX11-217ENST00000540935 USP17L1Q7RTZ2 530 aa18.76■□□□□ 0.59
DDX11-217ENST00000540935 GLIS2Q9BZE0 524 aaPredicted RBP18.76■□□□□ 0.59
DDX11-217ENST00000540935 SRCIN1Q9C0H9 1055 aa18.76■□□□□ 0.59
DDX11-217ENST00000540935 C9orf78Q9NZ63 289 aaPredicted RBP18.76■□□□□ 0.59
DDX11-217ENST00000540935 TLL2Q9Y6L7 1015 aa18.76■□□□□ 0.59
DDX11-217ENST00000540935 ECE1P42892 770 aa18.75■□□□□ 0.59
DDX11-217ENST00000540935 FMR1Q06787 632 aaKnown RBP eCLIP18.75■□□□□ 0.59
DDX11-217ENST00000540935 TBC1D10BQ4KMP7 808 aaPredicted RBP18.75■□□□□ 0.59
DDX11-217ENST00000540935 SLC4A10Q6U841 1118 aa18.75■□□□□ 0.59
DDX11-217ENST00000540935 COA1Q9GZY4 146 aa18.75■□□□□ 0.59
DDX11-217ENST00000540935 ZNF804BA4D1E1 1349 aa18.74■□□□□ 0.59
DDX11-217ENST00000540935 PTPRCP08575 1304 aa18.74■□□□□ 0.59
DDX11-217ENST00000540935 WDR33Q9C0J8 1336 aaKnown RBP18.74■□□□□ 0.59
DDX11-217ENST00000540935 CELF2O95319 508 aaKnown RBP18.74■□□□□ 0.59
DDX11-217ENST00000540935 SLFN5Q08AF3 891 aa18.74■□□□□ 0.59
DDX11-217ENST00000540935 KIF4BQ2VIQ3 1234 aa18.74■□□□□ 0.59
DDX11-217ENST00000540935 DCPSQ96C86 337 aaKnown RBP18.74■□□□□ 0.59
DDX11-217ENST00000540935 CHMP3Q9Y3E7 222 aa18.74■□□□□ 0.59
DDX11-217ENST00000540935 KCNJ4P48050 445 aa18.73■□□□□ 0.59
DDX11-217ENST00000540935 ZNF280AP59817 542 aaPredicted RBP18.73■□□□□ 0.59
DDX11-217ENST00000540935 CHRNDQ07001 517 aa18.73■□□□□ 0.59
DDX11-217ENST00000540935 CCDC57Q2TAC2 916 aa18.73■□□□□ 0.59
DDX11-217ENST00000540935 RBM26Q5T8P6 1007 aaKnown RBP18.73■□□□□ 0.59
DDX11-217ENST00000540935 AIDAQ96BJ3 306 aa18.73■□□□□ 0.59
DDX11-217ENST00000540935 HHIPL1Q96JK4 782 aa18.73■□□□□ 0.59
DDX11-217ENST00000540935 PCNTO95613 3336 aa18.73■□□□□ 0.59
DDX11-217ENST00000540935 MYO3BQ8WXR4 1341 aa18.73■□□□□ 0.59
DDX11-217ENST00000540935 USP17L8P0C7I0 530 aa18.72■□□□□ 0.59
DDX11-217ENST00000540935 MMP14P50281 582 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms