RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 EFCAB13Q8IY85 973 aa11.34□□□□□ -0.59
CLDN2-202ENST00000540876 TAOK2Q9UL54 1235 aa11.34□□□□□ -0.59
CLDN2-202ENST00000540876 CCDC9Q9Y3X0 531 aaKnown RBP11.34□□□□□ -0.59
CLDN2-202ENST00000540876 H3BQF6 201 aa11.34□□□□□ -0.59
CLDN2-202ENST00000540876 TTC19Q6DKK2 380 aaPredicted RBP11.34□□□□□ -0.59
CLDN2-202ENST00000540876 GIMAP7Q8NHV1 300 aa11.34□□□□□ -0.59
CLDN2-202ENST00000540876 SLC24A3Q9HC58 644 aa11.34□□□□□ -0.59
CLDN2-202ENST00000540876 USP16Q9Y5T5 823 aa11.34□□□□□ -0.59
CLDN2-202ENST00000540876 USP31Q70CQ4 1352 aa11.33□□□□□ -0.6
CLDN2-202ENST00000540876 ZBTB7BO15156 539 aaPredicted RBP11.33□□□□□ -0.6
CLDN2-202ENST00000540876 DNM1Q05193 864 aaKnown RBP11.33□□□□□ -0.6
CLDN2-202ENST00000540876 TRDNQ13061 729 aa11.33□□□□□ -0.6
CLDN2-202ENST00000540876 CCDC93Q567U6 631 aa11.33□□□□□ -0.6
CLDN2-202ENST00000540876 HOMER1Q86YM7 354 aa11.33□□□□□ -0.6
CLDN2-202ENST00000540876 USHBP1Q8N6Y0 703 aa11.33□□□□□ -0.6
CLDN2-202ENST00000540876 ARFGAP3Q9NP61 516 aa11.33□□□□□ -0.6
CLDN2-202ENST00000540876 TRIM35Q9UPQ4 493 aa11.33□□□□□ -0.6
CLDN2-202ENST00000540876 SHPRHQ149N8 1683 aa11.33□□□□□ -0.6
CLDN2-202ENST00000540876 NEBLO76041 1014 aa11.33□□□□□ -0.6
CLDN2-202ENST00000540876 ZNF165P49910 485 aa11.33□□□□□ -0.6
CLDN2-202ENST00000540876 OS9Q13438 667 aaPredicted RBP11.33□□□□□ -0.6
CLDN2-202ENST00000540876 TNMDQ9H2S6 317 aa11.33□□□□□ -0.6
CLDN2-202ENST00000540876 SBNO1A3KN83 1393 aa11.33□□□□□ -0.6
CLDN2-202ENST00000540876 CPP00450 1065 aa11.32□□□□□ -0.6
CLDN2-202ENST00000540876 CCZ1BP86790 482 aa11.32□□□□□ -0.6
CLDN2-202ENST00000540876 CCZ1P86791 482 aaPredicted RBP11.32□□□□□ -0.6
CLDN2-202ENST00000540876 PLEKHO1Q53GL0 409 aaPredicted RBP11.32□□□□□ -0.6
CLDN2-202ENST00000540876 DNAJC25Q9H1X3 360 aa11.32□□□□□ -0.6
CLDN2-202ENST00000540876 PALD1Q9ULE6 856 aa11.32□□□□□ -0.6
CLDN2-202ENST00000540876 KIAA0232Q92628 1395 aa11.32□□□□□ -0.6
CLDN2-202ENST00000540876 DTNBO60941 627 aa11.32□□□□□ -0.6
CLDN2-202ENST00000540876 HOXC9P31274 260 aa11.32□□□□□ -0.6
CLDN2-202ENST00000540876 EVCP57679 992 aa11.32□□□□□ -0.6
CLDN2-202ENST00000540876 CARD6Q9BX69 1037 aa11.32□□□□□ -0.6
CLDN2-202ENST00000540876 SRRTQ9BXP5 876 aaKnown RBP11.32□□□□□ -0.6
CLDN2-202ENST00000540876 MKRN1Q9UHC7 482 aaKnown RBP11.32□□□□□ -0.6
CLDN2-202ENST00000540876 ATP6V1DQ9Y5K8 247 aa11.32□□□□□ -0.6
CLDN2-202ENST00000540876 IQSEC2Q5JU85 1478 aa11.32□□□□□ -0.6
CLDN2-202ENST00000540876 A0A087WUV0 522 aaPredicted RBP11.32□□□□□ -0.6
CLDN2-202ENST00000540876 MPHOSPH10O00566 681 aaKnown RBP11.32□□□□□ -0.6
CLDN2-202ENST00000540876 STX6O43752 255 aa11.32□□□□□ -0.6
CLDN2-202ENST00000540876 F13A1P00488 732 aa11.32□□□□□ -0.6
CLDN2-202ENST00000540876 SSR1P43307 286 aaKnown RBP11.32□□□□□ -0.6
CLDN2-202ENST00000540876 EIF4A2Q14240 407 aaKnown RBP11.32□□□□□ -0.6
CLDN2-202ENST00000540876 NAIF1Q69YI7 327 aaPredicted RBP11.32□□□□□ -0.6
CLDN2-202ENST00000540876 ARHGEF25Q86VW2 580 aa11.32□□□□□ -0.6
CLDN2-202ENST00000540876 TDRD7Q8NHU6 1098 aaKnown RBP11.32□□□□□ -0.6
CLDN2-202ENST00000540876 DNAI1Q9UI46 699 aa11.32□□□□□ -0.6
CLDN2-202ENST00000540876 KIF1AQ12756 1690 aa11.31□□□□□ -0.6
CLDN2-202ENST00000540876 KIF20BQ96Q89 1820 aa11.31□□□□□ -0.6
CLDN2-202ENST00000540876 GOLGA6L19H0YKK7 550 aa11.31□□□□□ -0.6
CLDN2-202ENST00000540876 URI1O94763 535 aaPredicted RBP11.31□□□□□ -0.6
CLDN2-202ENST00000540876 CCDC158Q5M9N0 1113 aa11.31□□□□□ -0.6
CLDN2-202ENST00000540876 CCDC30Q5VVM6 783 aa11.31□□□□□ -0.6
CLDN2-202ENST00000540876 GBP6Q6ZN66 633 aa11.31□□□□□ -0.6
CLDN2-202ENST00000540876 JMYQ8N9B5 988 aa11.31□□□□□ -0.6
CLDN2-202ENST00000540876 KCNH5Q8NCM2 988 aa11.31□□□□□ -0.6
CLDN2-202ENST00000540876 ZNF428Q96B54 188 aa11.31□□□□□ -0.6
CLDN2-202ENST00000540876 PLEKHF1Q96S99 279 aa11.31□□□□□ -0.6
CLDN2-202ENST00000540876 PRDM11Q9NQV5 511 aa11.31□□□□□ -0.6
CLDN2-202ENST00000540876 MED1Q15648 1581 aaPredicted RBP11.31□□□□□ -0.6
CLDN2-202ENST00000540876 TRPM3Q9HCF6 1732 aaPredicted RBP11.31□□□□□ -0.6
CLDN2-202ENST00000540876 FAM83GA6ND36 823 aa11.31□□□□□ -0.6
CLDN2-202ENST00000540876 ERLIN2O94905 339 aa11.31□□□□□ -0.6
CLDN2-202ENST00000540876 LIG1P18858 919 aa11.31□□□□□ -0.6
CLDN2-202ENST00000540876 SYT1P21579 422 aa11.31□□□□□ -0.6
CLDN2-202ENST00000540876 HNRNPH1P31943 449 aaKnown RBP11.31□□□□□ -0.6
CLDN2-202ENST00000540876 LIG3P49916 1009 aa11.31□□□□□ -0.6
CLDN2-202ENST00000540876 KAT2BQ92831 832 aa11.3□□□□□ -0.6
CLDN2-202ENST00000540876 PPP1R13BQ96KQ4 1090 aa11.3□□□□□ -0.6
CLDN2-202ENST00000540876 JPH2Q9BR39 696 aaPredicted RBP11.3□□□□□ -0.6
CLDN2-202ENST00000540876 FUT8Q9BYC5 575 aa11.3□□□□□ -0.6
CLDN2-202ENST00000540876 AATKQ6ZMQ8 1374 aa11.3□□□□□ -0.6
CLDN2-202ENST00000540876 TADA3O75528 432 aa11.3□□□□□ -0.6
CLDN2-202ENST00000540876 USP8P40818 1118 aa11.3□□□□□ -0.6
CLDN2-202ENST00000540876 LARP6Q9BRS8 491 aaKnown RBP11.3□□□□□ -0.6
CLDN2-202ENST00000540876 STRN4Q9NRL3 753 aa11.3□□□□□ -0.6
CLDN2-202ENST00000540876 ARHGEF10O15013 1369 aa11.3□□□□□ -0.6
CLDN2-202ENST00000540876 CDC25BP30305 580 aa11.29□□□□□ -0.6
CLDN2-202ENST00000540876 IL13P35225 146 aa11.29□□□□□ -0.6
CLDN2-202ENST00000540876 MCM6Q14566 821 aa11.29□□□□□ -0.6
CLDN2-202ENST00000540876 FBXW10Q5XX13 1052 aa11.29□□□□□ -0.6
CLDN2-202ENST00000540876 PDE11AQ9HCR9 933 aa11.29□□□□□ -0.6
CLDN2-202ENST00000540876 KIF3CO14782 793 aa11.29□□□□□ -0.6
CLDN2-202ENST00000540876 ECM2O94769 699 aaPredicted RBP11.29□□□□□ -0.6
CLDN2-202ENST00000540876 LRRC31Q6UY01 552 aa11.29□□□□□ -0.6
CLDN2-202ENST00000540876 MAP2P11137 1827 aaKnown RBP11.29□□□□□ -0.6
CLDN2-202ENST00000540876 PAX7P23759 505 aa11.29□□□□□ -0.6
CLDN2-202ENST00000540876 E4F1Q66K89 784 aaPredicted RBP11.29□□□□□ -0.6
CLDN2-202ENST00000540876 ISM2Q6H9L7 571 aa11.29□□□□□ -0.6
CLDN2-202ENST00000540876 MIEF2Q96C03 454 aa11.29□□□□□ -0.6
CLDN2-202ENST00000540876 PHACTR3Q96KR7 559 aa11.29□□□□□ -0.6
CLDN2-202ENST00000540876 ANO2Q9NQ90 1003 aa11.29□□□□□ -0.6
CLDN2-202ENST00000540876 DACT1Q9NYF0 836 aa11.29□□□□□ -0.6
CLDN2-202ENST00000540876 PNPLA6Q8IY17 1366 aa11.29□□□□□ -0.6
CLDN2-202ENST00000540876 EFCAB8A8MWE9 144 aa11.28□□□□□ -0.6
CLDN2-202ENST00000540876 RPS6KA5O75582 802 aa11.28□□□□□ -0.6
CLDN2-202ENST00000540876 SETQ01105 290 aaPredicted RBP11.28□□□□□ -0.6
CLDN2-202ENST00000540876 SULT6B1Q6IMI4 303 aa11.28□□□□□ -0.6
CLDN2-202ENST00000540876 CPLX2Q6PUV4 134 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms