RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 ESYT1Q9BSJ8 1104 aa12.36□□□□□ -0.43
LMO3-224ENST00000540848 IRX2Q9BZI1 471 aaPredicted RBP12.36□□□□□ -0.43
LMO3-224ENST00000540848 TMEM134Q9H6X4 195 aa12.36□□□□□ -0.43
LMO3-224ENST00000540848 AHDC1Q5TGY3 1603 aaPredicted RBP12.36□□□□□ -0.43
LMO3-224ENST00000540848 TNS2Q63HR2 1409 aa12.36□□□□□ -0.43
LMO3-224ENST00000540848 SHANK3Q9BYB0 1731 aa12.36□□□□□ -0.43
LMO3-224ENST00000540848 COL22A1Q8NFW1 1626 aaPredicted RBP12.35□□□□□ -0.43
LMO3-224ENST00000540848 PRAMEF22A3QJZ6 481 aa12.35□□□□□ -0.43
LMO3-224ENST00000540848 NEURL1BA8MQ27 555 aa12.35□□□□□ -0.43
LMO3-224ENST00000540848 GLRX3O76003 335 aaKnown RBP12.35□□□□□ -0.43
LMO3-224ENST00000540848 DNAJB2P25686 324 aa12.35□□□□□ -0.43
LMO3-224ENST00000540848 DDIT3P35638 169 aa12.35□□□□□ -0.43
LMO3-224ENST00000540848 EVA1CP58658 441 aa12.35□□□□□ -0.43
LMO3-224ENST00000540848 LRP10Q7Z4F1 713 aa12.35□□□□□ -0.43
LMO3-224ENST00000540848 CNTROBQ8N137 903 aa12.35□□□□□ -0.43
LMO3-224ENST00000540848 NKX2-3Q8TAU0 364 aa12.35□□□□□ -0.43
LMO3-224ENST00000540848 XAGE3Q8WTP9 111 aa12.35□□□□□ -0.43
LMO3-224ENST00000540848 ARFGEF2Q9Y6D5 1785 aa12.35□□□□□ -0.43
LMO3-224ENST00000540848 RCCD1A6NED2 376 aa12.35□□□□□ -0.43
LMO3-224ENST00000540848 GPR37O15354 613 aa12.35□□□□□ -0.43
LMO3-224ENST00000540848 FRAT2O75474 233 aaPredicted RBP12.35□□□□□ -0.43
LMO3-224ENST00000540848 CHMLP26374 656 aa12.35□□□□□ -0.43
LMO3-224ENST00000540848 MCM2P49736 904 aa12.35□□□□□ -0.43
LMO3-224ENST00000540848 GCKRQ14397 625 aa12.35□□□□□ -0.43
LMO3-224ENST00000540848 COPS6Q7L5N1 327 aa12.35□□□□□ -0.43
LMO3-224ENST00000540848 PLBD2Q8NHP8 589 aa12.35□□□□□ -0.43
LMO3-224ENST00000540848 RBM46Q8TBY0 533 aaKnown RBP12.35□□□□□ -0.43
LMO3-224ENST00000540848 KCPQ6ZWJ8 1503 aa12.34□□□□□ -0.43
LMO3-224ENST00000540848 IGKV5-2P06315 115 aa12.34□□□□□ -0.43
LMO3-224ENST00000540848 HSP90AA1P07900 732 aaKnown RBP12.34□□□□□ -0.43
LMO3-224ENST00000540848 AIMP1Q12904 312 aaKnown RBP12.34□□□□□ -0.43
LMO3-224ENST00000540848 CWF19L2Q2TBE0 894 aaKnown RBP12.34□□□□□ -0.43
LMO3-224ENST00000540848 PLCH1Q4KWH8 1693 aa12.34□□□□□ -0.43
LMO3-224ENST00000540848 AFDNP55196 1824 aaKnown RBP12.33□□□□□ -0.44
LMO3-224ENST00000540848 DDX11L8A8MPP1 907 aa12.33□□□□□ -0.44
LMO3-224ENST00000540848 G3BP1Q13283 466 aaKnown RBP eCLIP12.33□□□□□ -0.44
LMO3-224ENST00000540848 PI4K2BQ8TCG2 481 aa12.33□□□□□ -0.44
LMO3-224ENST00000540848 RILPL2Q969X0 211 aa12.33□□□□□ -0.44
LMO3-224ENST00000540848 SUCLG2Q96I99 432 aa12.33□□□□□ -0.44
LMO3-224ENST00000540848 TEX13AQ9BXU3 409 aaPredicted RBP12.33□□□□□ -0.44
LMO3-224ENST00000540848 IL1RAPL2Q9NP60 686 aa12.33□□□□□ -0.44
LMO3-224ENST00000540848 LRP6O75581 1613 aa12.33□□□□□ -0.44
LMO3-224ENST00000540848 MYL6BP14649 208 aa12.32□□□□□ -0.44
LMO3-224ENST00000540848 FECHP22830 423 aa12.32□□□□□ -0.44
LMO3-224ENST00000540848 COPS2P61201 443 aa12.32□□□□□ -0.44
LMO3-224ENST00000540848 PPP1R18Q6NYC8 613 aa12.32□□□□□ -0.44
LMO3-224ENST00000540848 RUFY2Q8WXA3 655 aa12.32□□□□□ -0.44
LMO3-224ENST00000540848 BCL11AQ9H165 835 aa12.32□□□□□ -0.44
LMO3-224ENST00000540848 BICC1Q9H694 974 aaKnown RBP12.32□□□□□ -0.44
LMO3-224ENST00000540848 CWC22Q9HCG8 908 aaKnown RBP12.32□□□□□ -0.44
LMO3-224ENST00000540848 ECHDC1Q9NTX5 307 aa12.32□□□□□ -0.44
LMO3-224ENST00000540848 USP16Q9Y5T5 823 aa12.32□□□□□ -0.44
LMO3-224ENST00000540848 HIP1O00291 1037 aa12.31□□□□□ -0.44
LMO3-224ENST00000540848 IFIT2P09913 472 aaKnown RBP12.31□□□□□ -0.44
LMO3-224ENST00000540848 VSIG10Q8N0Z9 540 aa12.31□□□□□ -0.44
LMO3-224ENST00000540848 GBP4Q96PP9 640 aa12.31□□□□□ -0.44
LMO3-224ENST00000540848 MYD88Q99836 296 aa12.31□□□□□ -0.44
LMO3-224ENST00000540848 NUP188Q5SRE5 1749 aa12.31□□□□□ -0.44
LMO3-224ENST00000540848 RABL6Q3YEC7 729 aaPredicted RBP12.3□□□□□ -0.44
LMO3-224ENST00000540848 NUTM1Q86Y26 1132 aa12.3□□□□□ -0.44
LMO3-224ENST00000540848 KAZALD1Q96I82 304 aa12.3□□□□□ -0.44
LMO3-224ENST00000540848 COPRSQ9NQ92 184 aa12.3□□□□□ -0.44
LMO3-224ENST00000540848 MCM4P33991 863 aa12.3□□□□□ -0.44
LMO3-224ENST00000540848 TICAM2Q86XR7 235 aa12.3□□□□□ -0.44
LMO3-224ENST00000540848 PXYLP1Q8TE99 480 aa12.3□□□□□ -0.44
LMO3-224ENST00000540848 TMOD3Q9NYL9 352 aa12.3□□□□□ -0.44
LMO3-224ENST00000540848 ROBO1Q9Y6N7 1651 aa12.29□□□□□ -0.44
LMO3-224ENST00000540848 DISP2A7MBM2 1401 aa12.29□□□□□ -0.44
LMO3-224ENST00000540848 NUCB2P80303 420 aa12.29□□□□□ -0.44
LMO3-224ENST00000540848 RAB3GAP1Q15042 981 aa12.29□□□□□ -0.44
LMO3-224ENST00000540848 TSHZ3Q63HK5 1081 aa12.29□□□□□ -0.44
LMO3-224ENST00000540848 EVI5LQ96CN4 794 aa12.29□□□□□ -0.44
LMO3-224ENST00000540848 CDCA7Q9BWT1 371 aaPredicted RBP12.29□□□□□ -0.44
LMO3-224ENST00000540848 ANO2Q9NQ90 1003 aa12.29□□□□□ -0.44
LMO3-224ENST00000540848 STRN4Q9NRL3 753 aa12.29□□□□□ -0.44
LMO3-224ENST00000540848 SGSM2O43147 1006 aa12.28□□□□□ -0.44
LMO3-224ENST00000540848 SLC10A3P09131 477 aa12.28□□□□□ -0.44
LMO3-224ENST00000540848 HIC1Q14526 733 aa12.28□□□□□ -0.44
LMO3-224ENST00000540848 CLEC17AQ6ZS10 378 aa12.28□□□□□ -0.44
LMO3-224ENST00000540848 CCDC191Q8NCU4 936 aa12.28□□□□□ -0.44
LMO3-224ENST00000540848 TOGARAM1Q9Y4F4 1720 aa12.28□□□□□ -0.44
LMO3-224ENST00000540848 RAD50Q92878 1312 aa12.28□□□□□ -0.44
LMO3-224ENST00000540848 WNK3Q9BYP7 1800 aa12.27□□□□□ -0.44
LMO3-224ENST00000540848 CD2BP2O95400 341 aaKnown RBP12.27□□□□□ -0.44
LMO3-224ENST00000540848 KIAA1211Q6ZU35 1233 aa12.27□□□□□ -0.44
LMO3-224ENST00000540848 AACSQ86V21 672 aa12.27□□□□□ -0.44
LMO3-224ENST00000540848 DDX54Q8TDD1 881 aaKnown RBP12.27□□□□□ -0.44
LMO3-224ENST00000540848 CWC25Q9NXE8 425 aaPredicted RBP12.27□□□□□ -0.44
LMO3-224ENST00000540848 RFX7Q2KHR2 1363 aa12.27□□□□□ -0.45
LMO3-224ENST00000540848 A0A087WZG4 1122 aa12.26□□□□□ -0.45
LMO3-224ENST00000540848 H7C1W4 665 aa12.26□□□□□ -0.45
LMO3-224ENST00000540848 HSPA4P34932 840 aa12.26□□□□□ -0.45
LMO3-224ENST00000540848 SKOR2Q2VWA4 1001 aaPredicted RBP12.26□□□□□ -0.45
LMO3-224ENST00000540848 BLOC1S3Q6QNY0 202 aa12.26□□□□□ -0.45
LMO3-224ENST00000540848 UNC5CLQ8IV45 518 aa12.26□□□□□ -0.45
LMO3-224ENST00000540848 DIAPH3Q9NSV4 1193 aa12.26□□□□□ -0.45
LMO3-224ENST00000540848 BTG4Q9NY30 223 aa12.26□□□□□ -0.45
LMO3-224ENST00000540848 GOLGA6L22H0YM25 854 aa12.26□□□□□ -0.45
LMO3-224ENST00000540848 ZPR1O75312 459 aa12.26□□□□□ -0.45
LMO3-224ENST00000540848 SASH1O94885 1247 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms