RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 HELQQ8TDG4 1101 aa7.23□□□□□ -1.25
MDM2-227ENST00000540709 TIMELESSQ9UNS1 1208 aa7.23□□□□□ -1.25
MDM2-227ENST00000540709 MTMR7Q9Y216 660 aa7.23□□□□□ -1.25
MDM2-227ENST00000540709 PCSK2P16519 638 aa7.22□□□□□ -1.25
MDM2-227ENST00000540709 SHISA2Q6UWI4 295 aa7.22□□□□□ -1.25
MDM2-227ENST00000540709 SPACA7Q96KW9 195 aa7.22□□□□□ -1.25
MDM2-227ENST00000540709 NACC1Q96RE7 527 aa7.22□□□□□ -1.25
MDM2-227ENST00000540709 FRRS1LQ9P0K9 344 aa7.22□□□□□ -1.25
MDM2-227ENST00000540709 USP21Q9UK80 565 aa7.22□□□□□ -1.25
MDM2-227ENST00000540709 A6NHS1 94 aa7.21□□□□□ -1.26
MDM2-227ENST00000540709 EIF1AXP47813 144 aaKnown RBP7.21□□□□□ -1.26
MDM2-227ENST00000540709 ZNF438Q7Z4V0 828 aa7.21□□□□□ -1.26
MDM2-227ENST00000540709 ELP3Q9H9T3 547 aa7.21□□□□□ -1.26
MDM2-227ENST00000540709 CYP2E1P05181 493 aaPredicted RBP7.2□□□□□ -1.26
MDM2-227ENST00000540709 ELNP15502 786 aa7.2□□□□□ -1.26
MDM2-227ENST00000540709 HYAL2Q12891 473 aa7.2□□□□□ -1.26
MDM2-227ENST00000540709 ZNF211Q13398 564 aaPredicted RBP7.2□□□□□ -1.26
MDM2-227ENST00000540709 NCAPG2Q86XI2 1143 aa7.2□□□□□ -1.26
MDM2-227ENST00000540709 IL22RA1Q8N6P7 574 aa7.2□□□□□ -1.26
MDM2-227ENST00000540709 ABI2Q9NYB9 513 aaPredicted RBP7.2□□□□□ -1.26
MDM2-227ENST00000540709 C9orf172C9J069 976 aa7.19□□□□□ -1.26
MDM2-227ENST00000540709 CDC25BP30305 580 aa7.19□□□□□ -1.26
MDM2-227ENST00000540709 SOX18P35713 384 aa7.19□□□□□ -1.26
MDM2-227ENST00000540709 GRIK5Q16478 980 aa7.19□□□□□ -1.26
MDM2-227ENST00000540709 COL13A1Q5TAT6 717 aaPredicted RBP7.19□□□□□ -1.26
MDM2-227ENST00000540709 FMR1NBQ8N0W7 255 aaPredicted RBP7.19□□□□□ -1.26
MDM2-227ENST00000540709 OR13H1Q8NG92 308 aa7.19□□□□□ -1.26
MDM2-227ENST00000540709 LACRTQ9GZZ8 138 aa7.19□□□□□ -1.26
MDM2-227ENST00000540709 GGNBP2Q9H3C7 697 aa7.19□□□□□ -1.26
MDM2-227ENST00000540709 TMEM63CQ9P1W3 806 aa7.19□□□□□ -1.26
MDM2-227ENST00000540709 KANSL3Q9P2N6 904 aa7.19□□□□□ -1.26
MDM2-227ENST00000540709 TRIM33Q9UPN9 1127 aa7.19□□□□□ -1.26
MDM2-227ENST00000540709 K7ELQ4 463 aaPredicted RBP7.18□□□□□ -1.26
MDM2-227ENST00000540709 SELPP16109 830 aa7.18□□□□□ -1.26
MDM2-227ENST00000540709 CEP135Q66GS9 1140 aa7.18□□□□□ -1.26
MDM2-227ENST00000540709 ALKBH2Q6NS38 261 aa7.18□□□□□ -1.26
MDM2-227ENST00000540709 PHLDB3Q6NSJ2 640 aa7.18□□□□□ -1.26
MDM2-227ENST00000540709 ADAM23O75077 832 aa7.17□□□□□ -1.26
MDM2-227ENST00000540709 FAM13AO94988 1023 aa7.17□□□□□ -1.26
MDM2-227ENST00000540709 PDGFAP04085 211 aa7.17□□□□□ -1.26
MDM2-227ENST00000540709 RPLP1P05386 114 aaKnown RBP7.17□□□□□ -1.26
MDM2-227ENST00000540709 CES1P23141 567 aa7.17□□□□□ -1.26
MDM2-227ENST00000540709 ATP11AP98196 1134 aa7.17□□□□□ -1.26
MDM2-227ENST00000540709 FKBP4Q02790 459 aaKnown RBP eCLIP7.17□□□□□ -1.26
MDM2-227ENST00000540709 PDE12Q6L8Q7 609 aaKnown RBP7.17□□□□□ -1.26
MDM2-227ENST00000540709 TTC9Q92623 222 aa7.17□□□□□ -1.26
MDM2-227ENST00000540709 CNTN3Q9P232 1028 aa7.17□□□□□ -1.26
MDM2-227ENST00000540709 POLIQ9UNA4 740 aa7.17□□□□□ -1.26
MDM2-227ENST00000540709 MZF1P28698 734 aaPredicted RBP7.16□□□□□ -1.26
MDM2-227ENST00000540709 RASSF4Q9H2L5 321 aa7.16□□□□□ -1.26
MDM2-227ENST00000540709 SEMA6BQ9H3T3 888 aa7.16□□□□□ -1.26
MDM2-227ENST00000540709 USTQ9Y2C2 406 aa7.16□□□□□ -1.26
MDM2-227ENST00000540709 SMNDC1O75940 238 aaKnown RBP eCLIP7.15□□□□□ -1.26
MDM2-227ENST00000540709 NRG1Q02297 640 aaPredicted RBP7.15□□□□□ -1.26
MDM2-227ENST00000540709 MBTPS1Q14703 1052 aa7.15□□□□□ -1.26
MDM2-227ENST00000540709 B4GALNT3Q6L9W6 998 aa7.15□□□□□ -1.26
MDM2-227ENST00000540709 TXNDC11Q6PKC3 985 aa7.15□□□□□ -1.26
MDM2-227ENST00000540709 FBXO11Q86XK2 927 aa7.15□□□□□ -1.26
MDM2-227ENST00000540709 C1orf127Q8N9H9 656 aa7.15□□□□□ -1.26
MDM2-227ENST00000540709 RETREG2Q8NC44 543 aa7.15□□□□□ -1.26
MDM2-227ENST00000540709 LENG1Q96BZ8 264 aaPredicted RBP7.15□□□□□ -1.26
MDM2-227ENST00000540709 TPSG1Q9NRR2 321 aa7.15□□□□□ -1.26
MDM2-227ENST00000540709 FAM177BA6PVY3 158 aa7.14□□□□□ -1.27
MDM2-227ENST00000540709 LINC01387J3KSC0 135 aa7.14□□□□□ -1.27
MDM2-227ENST00000540709 SERPINB4P48594 390 aa7.14□□□□□ -1.27
MDM2-227ENST00000540709 SF3B2Q13435 895 aaKnown RBP7.14□□□□□ -1.27
MDM2-227ENST00000540709 DTWD1Q8N5C7 304 aa7.14□□□□□ -1.27
MDM2-227ENST00000540709 CCDC87Q9NVE4 849 aa7.14□□□□□ -1.27
MDM2-227ENST00000540709 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.14□□□□□ -1.27
MDM2-227ENST00000540709 DEAF1O75398 565 aaPredicted RBP7.13□□□□□ -1.27
MDM2-227ENST00000540709 TRPA1O75762 1119 aa7.13□□□□□ -1.27
MDM2-227ENST00000540709 HOXD8P13378 290 aaPredicted RBP7.13□□□□□ -1.27
MDM2-227ENST00000540709 IREB2P48200 963 aaKnown RBP7.13□□□□□ -1.27
MDM2-227ENST00000540709 TXNRD3Q86VQ6 643 aa7.13□□□□□ -1.27
MDM2-227ENST00000540709 PPME1Q9Y570 386 aa7.13□□□□□ -1.27
MDM2-227ENST00000540709 H3BRB1 525 aa7.12□□□□□ -1.27
MDM2-227ENST00000540709 PHACTR2O75167 634 aa7.12□□□□□ -1.27
MDM2-227ENST00000540709 ACPPP15309 386 aa7.12□□□□□ -1.27
MDM2-227ENST00000540709 CDC27P30260 824 aa7.12□□□□□ -1.27
MDM2-227ENST00000540709 ADGRE1Q14246 886 aa7.12□□□□□ -1.27
MDM2-227ENST00000540709 GLYCTKQ8IVS8 523 aa7.12□□□□□ -1.27
MDM2-227ENST00000540709 PBX4Q9BYU1 374 aa7.12□□□□□ -1.27
MDM2-227ENST00000540709 TUT1Q9H6E5 874 aaKnown RBP7.12□□□□□ -1.27
MDM2-227ENST00000540709 SH2B1Q9NRF2 756 aaPredicted RBP7.12□□□□□ -1.27
MDM2-227ENST00000540709 FZD6O60353 706 aa7.11□□□□□ -1.27
MDM2-227ENST00000540709 IGF2-ASQ6U949 168 aa7.11□□□□□ -1.27
MDM2-227ENST00000540709 ILDR2Q71H61 639 aa7.11□□□□□ -1.27
MDM2-227ENST00000540709 CEP120Q8N960 986 aa7.11□□□□□ -1.27
MDM2-227ENST00000540709 WFDC12Q8WWY7 111 aa7.11□□□□□ -1.27
MDM2-227ENST00000540709 TP53INP1Q96A56 240 aa7.11□□□□□ -1.27
MDM2-227ENST00000540709 EREGO14944 169 aa7.1□□□□□ -1.27
MDM2-227ENST00000540709 ALX3O95076 343 aa7.1□□□□□ -1.27
MDM2-227ENST00000540709 KIF4AO95239 1232 aa7.1□□□□□ -1.27
MDM2-227ENST00000540709 USP5P45974 858 aa7.1□□□□□ -1.27
MDM2-227ENST00000540709 SETDB1Q15047 1291 aa7.1□□□□□ -1.27
MDM2-227ENST00000540709 FAM117BQ6P1L5 589 aa7.1□□□□□ -1.27
MDM2-227ENST00000540709 XKR5Q6UX68 686 aa7.1□□□□□ -1.27
MDM2-227ENST00000540709 PMEPA1Q969W9 287 aa7.1□□□□□ -1.27
MDM2-227ENST00000540709 POP1Q99575 1024 aaKnown RBP7.1□□□□□ -1.27
MDM2-227ENST00000540709 CARD10Q9BWT7 1032 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms