RNA–Protein interactions for RNA: ENST00000540266.5

SSPN-207, Transcript of sarcospan, humanhuman

TSL 4 BASIC

Gene SSPN, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-207ENST00000540266 POLLQ9UGP5 575 aa13.86□□□□□ -0.19
SSPN-207ENST00000540266 ECE2O60344 883 aa13.85□□□□□ -0.19
SSPN-207ENST00000540266 MNX1P50219 401 aaPredicted RBP13.85□□□□□ -0.19
SSPN-207ENST00000540266 TMC4Q7Z404 712 aa13.85□□□□□ -0.19
SSPN-207ENST00000540266 NECTIN2Q92692 538 aa13.85□□□□□ -0.19
SSPN-207ENST00000540266 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.85□□□□□ -0.19
SSPN-207ENST00000540266 RBM27Q9P2N5 1060 aaKnown RBP13.85□□□□□ -0.19
SSPN-207ENST00000540266 PITPNM2Q9BZ72 1349 aa13.85□□□□□ -0.19
SSPN-207ENST00000540266 KIAA0100Q14667 2235 aaKnown RBP13.84□□□□□ -0.19
SSPN-207ENST00000540266 ALDH1A1P00352 501 aa13.84□□□□□ -0.19
SSPN-207ENST00000540266 MKRN3Q13064 507 aaKnown RBP13.84□□□□□ -0.19
SSPN-207ENST00000540266 DOK7Q18PE1 504 aa13.84□□□□□ -0.19
SSPN-207ENST00000540266 DDX46Q7L014 1031 aaKnown RBP13.84□□□□□ -0.19
SSPN-207ENST00000540266 PRO3102Q9H379 93 aa13.84□□□□□ -0.19
SSPN-207ENST00000540266 RRP7AQ9Y3A4 280 aaKnown RBP13.84□□□□□ -0.19
SSPN-207ENST00000540266 CEP290O15078 2479 aa13.84□□□□□ -0.19
SSPN-207ENST00000540266 PAPPA2Q9BXP8 1791 aa13.83□□□□□ -0.19
SSPN-207ENST00000540266 COL3A1P02461 1466 aaPredicted RBP13.83□□□□□ -0.2
SSPN-207ENST00000540266 RIMBP2O15034 1052 aa13.83□□□□□ -0.2
SSPN-207ENST00000540266 U2SURPO15042 1029 aaKnown RBP13.83□□□□□ -0.2
SSPN-207ENST00000540266 HCLS1P14317 486 aaPredicted RBP13.83□□□□□ -0.2
SSPN-207ENST00000540266 CAP1Q01518 475 aa13.83□□□□□ -0.2
SSPN-207ENST00000540266 PTPN12Q05209 780 aaKnown RBP13.83□□□□□ -0.2
SSPN-207ENST00000540266 TAF7Q15545 349 aaPredicted RBP13.83□□□□□ -0.2
SSPN-207ENST00000540266 PRAMEF18Q5VWM3 479 aa13.83□□□□□ -0.2
SSPN-207ENST00000540266 CHRDL2Q6WN34 429 aa13.83□□□□□ -0.2
SSPN-207ENST00000540266 LRP10Q7Z4F1 713 aa13.83□□□□□ -0.2
SSPN-207ENST00000540266 IFNLR1Q8IU57 520 aaPredicted RBP13.83□□□□□ -0.2
SSPN-207ENST00000540266 ZNF333Q96JL9 665 aa13.83□□□□□ -0.2
SSPN-207ENST00000540266 GMLQ99445 158 aa13.83□□□□□ -0.2
SSPN-207ENST00000540266 RSPH6AQ9H0K4 717 aa13.83□□□□□ -0.2
SSPN-207ENST00000540266 MIS18AQ9NYP9 233 aa13.83□□□□□ -0.2
SSPN-207ENST00000540266 ZNF609O15014 1411 aa13.82□□□□□ -0.2
SSPN-207ENST00000540266 POLR2AP24928 1970 aaKnown RBP13.82□□□□□ -0.2
SSPN-207ENST00000540266 PRKAR2BP31323 418 aa13.82□□□□□ -0.2
SSPN-207ENST00000540266 LDLRAD1Q5T700 205 aa13.82□□□□□ -0.2
SSPN-207ENST00000540266 SPRYD7Q5W111 196 aa13.82□□□□□ -0.2
SSPN-207ENST00000540266 NSFL1CQ9UNZ2 370 aaKnown RBP13.82□□□□□ -0.2
SSPN-207ENST00000540266 SCAF8Q9UPN6 1271 aaKnown RBP13.82□□□□□ -0.2
SSPN-207ENST00000540266 LAMA3Q16787 3333 aa13.82□□□□□ -0.2
SSPN-207ENST00000540266 HTATSF1O43719 755 aaKnown RBP13.81□□□□□ -0.2
SSPN-207ENST00000540266 MYL6BP14649 208 aa13.81□□□□□ -0.2
SSPN-207ENST00000540266 INHBEP58166 350 aa13.81□□□□□ -0.2
SSPN-207ENST00000540266 DCTN1Q14203 1278 aa13.81□□□□□ -0.2
SSPN-207ENST00000540266 IFNL1Q8IU54 200 aa13.81□□□□□ -0.2
SSPN-207ENST00000540266 AGBL3Q8NEM8 1001 aa13.81□□□□□ -0.2
SSPN-207ENST00000540266 TMEM106CQ9BVX2 250 aa13.81□□□□□ -0.2
SSPN-207ENST00000540266 C6orf229H3BNL8 230 aa13.8□□□□□ -0.2
SSPN-207ENST00000540266 PER1O15534 1290 aaPredicted RBP13.8□□□□□ -0.2
SSPN-207ENST00000540266 GPSM2P81274 684 aa13.8□□□□□ -0.2
SSPN-207ENST00000540266 TRIM26Q12899 539 aaPredicted RBP13.8□□□□□ -0.2
SSPN-207ENST00000540266 BBXQ8WY36 941 aaPredicted RBP13.8□□□□□ -0.2
SSPN-207ENST00000540266 RTF1Q92541 710 aaKnown RBP13.8□□□□□ -0.2
SSPN-207ENST00000540266 MYOZ2Q9NPC6 264 aa13.8□□□□□ -0.2
SSPN-207ENST00000540266 EIF4A1P60842 406 aaKnown RBP13.79□□□□□ -0.2
SSPN-207ENST00000540266 RSBN1LQ6PCB5 846 aaPredicted RBP13.79□□□□□ -0.2
SSPN-207ENST00000540266 NLRP10Q86W26 655 aa13.79□□□□□ -0.2
SSPN-207ENST00000540266 TBC1D16Q8TBP0 767 aa13.79□□□□□ -0.2
SSPN-207ENST00000540266 ERO1AQ96HE7 468 aa13.79□□□□□ -0.2
SSPN-207ENST00000540266 EFCC1Q9HA90 598 aa13.79□□□□□ -0.2
SSPN-207ENST00000540266 RBBP6Q7Z6E9 1792 aaKnown RBP13.78□□□□□ -0.2
SSPN-207ENST00000540266 IGF2BP3O00425 579 aaKnown RBP eCLIP13.78□□□□□ -0.2
SSPN-207ENST00000540266 USP17L8P0C7I0 530 aa13.78□□□□□ -0.2
SSPN-207ENST00000540266 TCIRG1Q13488 830 aa13.78□□□□□ -0.2
SSPN-207ENST00000540266 CD99L2Q8TCZ2 262 aa13.78□□□□□ -0.2
SSPN-207ENST00000540266 CELF1Q92879 486 aaKnown RBP13.78□□□□□ -0.2
SSPN-207ENST00000540266 EYA3Q99504 573 aa13.78□□□□□ -0.2
SSPN-207ENST00000540266 NUP98P52948 1817 aa13.78□□□□□ -0.2
SSPN-207ENST00000540266 MANSC4A6NHS7 340 aaPredicted RBP13.77□□□□□ -0.21
SSPN-207ENST00000540266 SPDYE4A6NLX3 237 aa13.77□□□□□ -0.21
SSPN-207ENST00000540266 HSPA5P11021 654 aaKnown RBP13.77□□□□□ -0.21
SSPN-207ENST00000540266 TTLL12Q14166 644 aaPredicted RBP13.77□□□□□ -0.21
SSPN-207ENST00000540266 PDIA6Q15084 440 aa13.77□□□□□ -0.21
SSPN-207ENST00000540266 NBPF9Q3BBW0 867 aa13.77□□□□□ -0.21
SSPN-207ENST00000540266 ERBB4Q15303 1308 aa13.76□□□□□ -0.21
SSPN-207ENST00000540266 SF3B3Q15393 1217 aaKnown RBP13.76□□□□□ -0.21
SSPN-207ENST00000540266 ZC3H12CQ9C0D7 883 aaKnown RBP13.76□□□□□ -0.21
SSPN-207ENST00000540266 PODXL2Q9NZ53 605 aa13.76□□□□□ -0.21
SSPN-207ENST00000540266 SH3TC1Q8TE82 1336 aa13.75□□□□□ -0.21
SSPN-207ENST00000540266 EIF4G2P78344 907 aaKnown RBP eCLIP13.75□□□□□ -0.21
SSPN-207ENST00000540266 CRHR2Q13324 411 aa13.75□□□□□ -0.21
SSPN-207ENST00000540266 NBPF11Q86T75 865 aa13.75□□□□□ -0.21
SSPN-207ENST00000540266 TRMT112Q9UI30 125 aaKnown RBP13.75□□□□□ -0.21
SSPN-207ENST00000540266 UNC80Q8N2C7 3258 aa13.75□□□□□ -0.21
SSPN-207ENST00000540266 WTIPA6NIX2 430 aaPredicted RBP13.74□□□□□ -0.21
SSPN-207ENST00000540266 SOX1O00570 391 aaPredicted RBP13.74□□□□□ -0.21
SSPN-207ENST00000540266 ZBTB48P10074 688 aaPredicted RBP13.74□□□□□ -0.21
SSPN-207ENST00000540266 NF2P35240 595 aa13.74□□□□□ -0.21
SSPN-207ENST00000540266 SP3Q02447 781 aa13.74□□□□□ -0.21
SSPN-207ENST00000540266 CC2D1BQ5T0F9 858 aaKnown RBP13.74□□□□□ -0.21
SSPN-207ENST00000540266 ARMC9Q7Z3E5 817 aa13.74□□□□□ -0.21
SSPN-207ENST00000540266 THUMPD2Q9BTF0 503 aaKnown RBP13.74□□□□□ -0.21
SSPN-207ENST00000540266 LRRC37AA6NMS7 1700 aa13.73□□□□□ -0.21
SSPN-207ENST00000540266 WNT10BO00744 389 aa13.73□□□□□ -0.21
SSPN-207ENST00000540266 MAP3K11Q16584 847 aa13.73□□□□□ -0.21
SSPN-207ENST00000540266 SLC4A8Q2Y0W8 1093 aa13.73□□□□□ -0.21
SSPN-207ENST00000540266 SLC9C1Q4G0N8 1177 aa13.73□□□□□ -0.21
SSPN-207ENST00000540266 UBE2Q1Q7Z7E8 422 aa13.73□□□□□ -0.21
SSPN-207ENST00000540266 PNISRQ8TF01 805 aaKnown RBP13.73□□□□□ -0.21
SSPN-207ENST00000540266 A0A1W2PPC1 479 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms