RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 RIC1Q4ADV7 1423 aa12.63□□□□□ -0.39
PABPC1P4-201ENST00000539977 COL4A1P02462 1669 aa12.63□□□□□ -0.39
PABPC1P4-201ENST00000539977 VGLL2Q8N8G2 317 aa12.63□□□□□ -0.39
PABPC1P4-201ENST00000539977 XAGE2Q96GT9 111 aa12.63□□□□□ -0.39
PABPC1P4-201ENST00000539977 GPR108Q9NPR9 543 aa12.63□□□□□ -0.39
PABPC1P4-201ENST00000539977 PDE8BO95263 885 aa12.62□□□□□ -0.39
PABPC1P4-201ENST00000539977 MMP10P09238 476 aa12.62□□□□□ -0.39
PABPC1P4-201ENST00000539977 ATP2B3Q16720 1220 aa12.62□□□□□ -0.39
PABPC1P4-201ENST00000539977 GORABQ5T7V8 394 aa12.62□□□□□ -0.39
PABPC1P4-201ENST00000539977 ANKRD18AQ8IVF6 992 aa12.62□□□□□ -0.39
PABPC1P4-201ENST00000539977 NLGN1Q8N2Q7 840 aa12.62□□□□□ -0.39
PABPC1P4-201ENST00000539977 FLAD1Q8NFF5 587 aa12.62□□□□□ -0.39
PABPC1P4-201ENST00000539977 CDC5LQ99459 802 aaKnown RBP12.62□□□□□ -0.39
PABPC1P4-201ENST00000539977 DNAJC2Q99543 621 aaKnown RBP12.62□□□□□ -0.39
PABPC1P4-201ENST00000539977 AKAP2Q9Y2D5 859 aa12.62□□□□□ -0.39
PABPC1P4-201ENST00000539977 CNTROBQ8N137 903 aa12.61□□□□□ -0.39
PABPC1P4-201ENST00000539977 ZNF609O15014 1411 aa12.61□□□□□ -0.39
PABPC1P4-201ENST00000539977 RTL9Q8NET4 1388 aa12.61□□□□□ -0.39
PABPC1P4-201ENST00000539977 DDX60Q8IY21 1712 aaKnown RBP12.61□□□□□ -0.39
PABPC1P4-201ENST00000539977 ATP5JP18859 108 aa12.61□□□□□ -0.39
PABPC1P4-201ENST00000539977 CHMLP26374 656 aa12.61□□□□□ -0.39
PABPC1P4-201ENST00000539977 ST5P78524 1137 aa12.61□□□□□ -0.39
PABPC1P4-201ENST00000539977 CHRNDQ07001 517 aa12.61□□□□□ -0.39
PABPC1P4-201ENST00000539977 DDX46Q7L014 1031 aaKnown RBP12.61□□□□□ -0.39
PABPC1P4-201ENST00000539977 UPF2Q9HAU5 1272 aaKnown RBP12.61□□□□□ -0.39
PABPC1P4-201ENST00000539977 SNRKQ9NRH2 765 aa12.61□□□□□ -0.39
PABPC1P4-201ENST00000539977 MROH5Q6ZUA9 1318 aa12.6□□□□□ -0.39
PABPC1P4-201ENST00000539977 RPS8P62241 208 aaKnown RBP12.6□□□□□ -0.39
PABPC1P4-201ENST00000539977 IL25Q9H293 177 aa12.6□□□□□ -0.39
PABPC1P4-201ENST00000539977 CHGBP05060 677 aa12.59□□□□□ -0.39
PABPC1P4-201ENST00000539977 SCARF1Q14162 830 aa12.59□□□□□ -0.39
PABPC1P4-201ENST00000539977 CASC1Q6TDU7 716 aa12.59□□□□□ -0.39
PABPC1P4-201ENST00000539977 PI16Q6UXB8 463 aa12.59□□□□□ -0.39
PABPC1P4-201ENST00000539977 BSDC1Q9NW68 430 aaPredicted RBP12.59□□□□□ -0.39
PABPC1P4-201ENST00000539977 ANP32AP39687 249 aaKnown RBP12.59□□□□□ -0.39
PABPC1P4-201ENST00000539977 PUM3Q15397 648 aaKnown RBP12.59□□□□□ -0.39
PABPC1P4-201ENST00000539977 TTC39AQ5SRH9 613 aa12.59□□□□□ -0.39
PABPC1P4-201ENST00000539977 C22orf23Q9BZE7 217 aa12.59□□□□□ -0.39
PABPC1P4-201ENST00000539977 MINPP1Q9UNW1 487 aa12.59□□□□□ -0.39
PABPC1P4-201ENST00000539977 PARP3Q9Y6F1 533 aa12.59□□□□□ -0.39
PABPC1P4-201ENST00000539977 COL24A1Q17RW2 1714 aa12.58□□□□□ -0.4
PABPC1P4-201ENST00000539977 GOLIM4O00461 696 aa12.58□□□□□ -0.4
PABPC1P4-201ENST00000539977 IFIT1P09914 478 aaKnown RBP12.58□□□□□ -0.4
PABPC1P4-201ENST00000539977 FGFR2P21802 821 aa12.58□□□□□ -0.4
PABPC1P4-201ENST00000539977 FKBP4Q02790 459 aaKnown RBP eCLIP12.58□□□□□ -0.4
PABPC1P4-201ENST00000539977 CCDC158Q5M9N0 1113 aa12.58□□□□□ -0.4
PABPC1P4-201ENST00000539977 CWC27Q6UX04 472 aaKnown RBP12.58□□□□□ -0.4
PABPC1P4-201ENST00000539977 LPIN2Q92539 896 aa12.58□□□□□ -0.4
PABPC1P4-201ENST00000539977 RPGRQ92834 1020 aaKnown RBP12.58□□□□□ -0.4
PABPC1P4-201ENST00000539977 EVI5LQ96CN4 794 aa12.58□□□□□ -0.4
PABPC1P4-201ENST00000539977 TBC1D32Q96NH3 1257 aa12.58□□□□□ -0.4
PABPC1P4-201ENST00000539977 FSD1Q9BTV5 496 aa12.58□□□□□ -0.4
PABPC1P4-201ENST00000539977 PHKA1P46020 1223 aa12.57□□□□□ -0.4
PABPC1P4-201ENST00000539977 HAUS7Q99871 368 aa12.57□□□□□ -0.4
PABPC1P4-201ENST00000539977 ESYT1Q9BSJ8 1104 aa12.57□□□□□ -0.4
PABPC1P4-201ENST00000539977 ANTXR1Q9H6X2 564 aa12.57□□□□□ -0.4
PABPC1P4-201ENST00000539977 BCAMP50895 628 aa12.57□□□□□ -0.4
PABPC1P4-201ENST00000539977 SLFNL1Q499Z3 407 aa12.57□□□□□ -0.4
PABPC1P4-201ENST00000539977 CCDC102BQ68D86 513 aa12.57□□□□□ -0.4
PABPC1P4-201ENST00000539977 FAM227BQ96M60 508 aa12.57□□□□□ -0.4
PABPC1P4-201ENST00000539977 TNRC6CQ9HCJ0 1690 aaKnown RBP12.56□□□□□ -0.4
PABPC1P4-201ENST00000539977 MYH3P11055 1940 aa12.56□□□□□ -0.4
PABPC1P4-201ENST00000539977 SLC5A1P13866 664 aa12.56□□□□□ -0.4
PABPC1P4-201ENST00000539977 GRAPQ13588 217 aa12.56□□□□□ -0.4
PABPC1P4-201ENST00000539977 CRY2Q49AN0 593 aa12.56□□□□□ -0.4
PABPC1P4-201ENST00000539977 GRAPLQ8TC17 118 aaPredicted RBP12.56□□□□□ -0.4
PABPC1P4-201ENST00000539977 DIAPH3Q9NSV4 1193 aa12.56□□□□□ -0.4
PABPC1P4-201ENST00000539977 PAG1Q9NWQ8 432 aa12.56□□□□□ -0.4
PABPC1P4-201ENST00000539977 LRP5O75197 1615 aa12.55□□□□□ -0.4
PABPC1P4-201ENST00000539977 KLRK1P26718 216 aa12.55□□□□□ -0.4
PABPC1P4-201ENST00000539977 MCAMP43121 646 aa12.55□□□□□ -0.4
PABPC1P4-201ENST00000539977 ZAP70P43403 619 aa12.55□□□□□ -0.4
PABPC1P4-201ENST00000539977 ANO2Q9NQ90 1003 aa12.55□□□□□ -0.4
PABPC1P4-201ENST00000539977 IQSEC3Q9UPP2 1182 aaPredicted RBP12.55□□□□□ -0.4
PABPC1P4-201ENST00000539977 TAF1P21675 1872 aa12.55□□□□□ -0.4
PABPC1P4-201ENST00000539977 SRCAPQ6ZRS2 3230 aa12.55□□□□□ -0.4
PABPC1P4-201ENST00000539977 TUBGCP6Q96RT7 1819 aa12.55□□□□□ -0.4
PABPC1P4-201ENST00000539977 GYG1P46976 350 aa12.55□□□□□ -0.4
PABPC1P4-201ENST00000539977 NMIQ13287 307 aaPredicted RBP12.55□□□□□ -0.4
PABPC1P4-201ENST00000539977 RBM17Q96I25 401 aaKnown RBP12.55□□□□□ -0.4
PABPC1P4-201ENST00000539977 BRIP1Q9BX63 1249 aa12.55□□□□□ -0.4
PABPC1P4-201ENST00000539977 USP26Q9BXU7 913 aa12.55□□□□□ -0.4
PABPC1P4-201ENST00000539977 KCNJ4P48050 445 aa12.54□□□□□ -0.4
PABPC1P4-201ENST00000539977 CCDC125Q86Z20 511 aa12.54□□□□□ -0.4
PABPC1P4-201ENST00000539977 ANKIB1Q9P2G1 1089 aa12.54□□□□□ -0.4
PABPC1P4-201ENST00000539977 LAMB2P55268 1798 aa12.54□□□□□ -0.4
PABPC1P4-201ENST00000539977 A0A0D9SFI3 127 aa12.53□□□□□ -0.4
PABPC1P4-201ENST00000539977 KLRG2A4D1S0 409 aaPredicted RBP12.53□□□□□ -0.4
PABPC1P4-201ENST00000539977 SGSM2O43147 1006 aa12.53□□□□□ -0.4
PABPC1P4-201ENST00000539977 GPR101Q96P66 508 aaPredicted RBP12.53□□□□□ -0.4
PABPC1P4-201ENST00000539977 RGPD3A6NKT7 1758 aaPredicted RBP12.53□□□□□ -0.4
PABPC1P4-201ENST00000539977 RGPD4Q7Z3J3 1758 aa12.53□□□□□ -0.4
PABPC1P4-201ENST00000539977 REC8O95072 547 aa12.53□□□□□ -0.4
PABPC1P4-201ENST00000539977 SLC4A3P48751 1232 aa12.53□□□□□ -0.4
PABPC1P4-201ENST00000539977 OLFM4Q6UX06 510 aa12.53□□□□□ -0.4
PABPC1P4-201ENST00000539977 KBTBD3Q8NAB2 608 aa12.53□□□□□ -0.4
PABPC1P4-201ENST00000539977 SEC62Q99442 399 aaKnown RBP12.53□□□□□ -0.4
PABPC1P4-201ENST00000539977 ZBTB7AO95365 584 aa12.52□□□□□ -0.41
PABPC1P4-201ENST00000539977 CYP2E1P05181 493 aaPredicted RBP12.52□□□□□ -0.41
PABPC1P4-201ENST00000539977 SRGNP10124 158 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms