RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 CDCA2Q69YH5 1023 aaPredicted RBP7.09□□□□□ -1.27
SNHG1-211ENST00000539921 LRRC31Q6UY01 552 aa7.09□□□□□ -1.27
SNHG1-211ENST00000539921 B4GALNT4Q76KP1 1039 aa7.09□□□□□ -1.27
SNHG1-211ENST00000539921 RSRC2Q7L4I2 434 aaKnown RBP7.09□□□□□ -1.27
SNHG1-211ENST00000539921 USP48Q86UV5 1035 aa7.09□□□□□ -1.27
SNHG1-211ENST00000539921 TRIM74Q86UV6 250 aa7.09□□□□□ -1.27
SNHG1-211ENST00000539921 TRIM73Q86UV7 250 aa7.09□□□□□ -1.27
SNHG1-211ENST00000539921 IQCA1Q86XH1 822 aa7.09□□□□□ -1.27
SNHG1-211ENST00000539921 CACTINQ8WUQ7 758 aaKnown RBP7.09□□□□□ -1.27
SNHG1-211ENST00000539921 ZFAND2BQ8WV99 257 aa7.09□□□□□ -1.27
SNHG1-211ENST00000539921 KIF12Q96FN5 646 aa7.09□□□□□ -1.27
SNHG1-211ENST00000539921 ANKRD27Q96NW4 1050 aa7.09□□□□□ -1.27
SNHG1-211ENST00000539921 MFRPQ9BY79 579 aa7.09□□□□□ -1.27
SNHG1-211ENST00000539921 RRP7BPQ9NSQ0 103 aa7.09□□□□□ -1.27
SNHG1-211ENST00000539921 IRAK4Q9NWZ3 460 aa7.09□□□□□ -1.27
SNHG1-211ENST00000539921 CEP126Q9P2H0 1117 aa7.09□□□□□ -1.27
SNHG1-211ENST00000539921 RAB21Q9UL25 225 aa7.09□□□□□ -1.27
SNHG1-211ENST00000539921 ZNF644Q9H582 1327 aaPredicted RBP7.08□□□□□ -1.28
SNHG1-211ENST00000539921 ABLIM1O14639 778 aa7.08□□□□□ -1.28
SNHG1-211ENST00000539921 APAF1O14727 1248 aa7.08□□□□□ -1.28
SNHG1-211ENST00000539921 AP5Z1O43299 807 aa7.08□□□□□ -1.28
SNHG1-211ENST00000539921 SASH3O75995 380 aa7.08□□□□□ -1.28
SNHG1-211ENST00000539921 RTN3O95197 1032 aaPredicted RBP7.08□□□□□ -1.28
SNHG1-211ENST00000539921 SKILP12757 684 aa7.08□□□□□ -1.28
SNHG1-211ENST00000539921 EZRP15311 586 aaKnown RBP7.08□□□□□ -1.28
SNHG1-211ENST00000539921 INPP5BP32019 993 aa7.08□□□□□ -1.28
SNHG1-211ENST00000539921 PEX19P40855 299 aa7.08□□□□□ -1.28
SNHG1-211ENST00000539921 SMTNP53814 917 aa7.08□□□□□ -1.28
SNHG1-211ENST00000539921 CCZ1BP86790 482 aa7.08□□□□□ -1.28
SNHG1-211ENST00000539921 CCZ1P86791 482 aaPredicted RBP7.08□□□□□ -1.28
SNHG1-211ENST00000539921 TBC1D25Q3MII6 688 aa7.08□□□□□ -1.28
SNHG1-211ENST00000539921 RBM26Q5T8P6 1007 aaKnown RBP7.08□□□□□ -1.28
SNHG1-211ENST00000539921 MICALCLQ6ZW33 695 aa7.08□□□□□ -1.28
SNHG1-211ENST00000539921 DZIP3Q86Y13 1208 aaKnown RBP7.08□□□□□ -1.28
SNHG1-211ENST00000539921 OR8K1Q8NGG5 319 aa7.08□□□□□ -1.28
SNHG1-211ENST00000539921 MICAL1Q8TDZ2 1067 aa7.08□□□□□ -1.28
SNHG1-211ENST00000539921 KAT2BQ92831 832 aa7.08□□□□□ -1.28
SNHG1-211ENST00000539921 KCNB2Q92953 911 aa7.08□□□□□ -1.28
SNHG1-211ENST00000539921 SAAL1Q96ER3 474 aa7.08□□□□□ -1.28
SNHG1-211ENST00000539921 CCDC97Q96F63 343 aaPredicted RBP7.08□□□□□ -1.28
SNHG1-211ENST00000539921 RMDN2Q96LZ7 410 aa7.08□□□□□ -1.28
SNHG1-211ENST00000539921 AGAP3Q96P47 875 aa7.08□□□□□ -1.28
SNHG1-211ENST00000539921 LZTS2Q9BRK4 669 aa7.08□□□□□ -1.28
SNHG1-211ENST00000539921 MOV10L1Q9BXT6 1211 aaKnown RBP7.08□□□□□ -1.28
SNHG1-211ENST00000539921 IQCGQ9H095 443 aaKnown RBP7.08□□□□□ -1.28
SNHG1-211ENST00000539921 SYNJ2O15056 1496 aa7.08□□□□□ -1.28
SNHG1-211ENST00000539921 MAGI2Q86UL8 1455 aa7.08□□□□□ -1.28
SNHG1-211ENST00000539921 MYOM1P52179 1685 aa7.08□□□□□ -1.28
SNHG1-211ENST00000539921 USP32Q8NFA0 1604 aa7.08□□□□□ -1.28
SNHG1-211ENST00000539921 RPGRIP1LQ68CZ1 1315 aa7.07□□□□□ -1.28
SNHG1-211ENST00000539921 NPHP3Q7Z494 1330 aa7.07□□□□□ -1.28
SNHG1-211ENST00000539921 NRXN1Q9ULB1 1477 aa7.07□□□□□ -1.28
SNHG1-211ENST00000539921 PPFIA3O75145 1194 aa7.07□□□□□ -1.28
SNHG1-211ENST00000539921 CAND2O75155 1236 aa7.07□□□□□ -1.28
SNHG1-211ENST00000539921 MCM3P25205 808 aa7.07□□□□□ -1.28
SNHG1-211ENST00000539921 RAB27AP51159 221 aa7.07□□□□□ -1.28
SNHG1-211ENST00000539921 LONRF2Q1L5Z9 754 aa7.07□□□□□ -1.28
SNHG1-211ENST00000539921 RGL3Q3MIN7 710 aa7.07□□□□□ -1.28
SNHG1-211ENST00000539921 TLDC1Q6P9B6 456 aa7.07□□□□□ -1.28
SNHG1-211ENST00000539921 ATF7IPQ6VMQ6 1270 aa7.07□□□□□ -1.28
SNHG1-211ENST00000539921 ZGPATQ8N5A5 531 aaKnown RBP7.07□□□□□ -1.28
SNHG1-211ENST00000539921 MSANTD4Q8NCY6 345 aa7.07□□□□□ -1.28
SNHG1-211ENST00000539921 HDAC7Q8WUI4 952 aa7.07□□□□□ -1.28
SNHG1-211ENST00000539921 ZKSCAN4Q969J2 545 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-211ENST00000539921 PLEKHG4BQ96PX9 1271 aa7.07□□□□□ -1.28
SNHG1-211ENST00000539921 PHF12Q96QT6 1004 aa7.07□□□□□ -1.28
SNHG1-211ENST00000539921 TRIM5Q9C035 493 aa7.07□□□□□ -1.28
SNHG1-211ENST00000539921 CABP2Q9NPB3 220 aa7.07□□□□□ -1.28
SNHG1-211ENST00000539921 ZRANB1Q9UGI0 708 aa7.07□□□□□ -1.28
SNHG1-211ENST00000539921 ITGB1BP2Q9UKP3 347 aa7.07□□□□□ -1.28
SNHG1-211ENST00000539921 PHF8Q9UPP1 1060 aa7.07□□□□□ -1.28
SNHG1-211ENST00000539921 AKAP2Q9Y2D5 859 aa7.07□□□□□ -1.28
SNHG1-211ENST00000539921 ASXL2Q76L83 1435 aa7.07□□□□□ -1.28
SNHG1-211ENST00000539921 DISP3Q9P2K9 1392 aa7.07□□□□□ -1.28
SNHG1-211ENST00000539921 MAGI3Q5TCQ9 1506 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 IQGAP1P46940 1657 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 SHPRHQ149N8 1683 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 SYNRGQ9UMZ2 1314 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 AK9Q5TCS8 1911 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 GOLGA6L10A6NI86 522 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 EXOC5O00471 708 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 OPA1O60313 960 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 YY1P25490 414 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 TXLNAP40222 546 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 GCLCP48506 637 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-211ENST00000539921 FNTAP49354 379 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 GNAI1P63096 354 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 CCT2P78371 535 aaKnown RBP7.06□□□□□ -1.28
SNHG1-211ENST00000539921 TYRO3Q06418 890 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 LRMPQ12912 555 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 RASA3Q14644 834 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 IQCB1Q15051 598 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 TAF7Q15545 349 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-211ENST00000539921 ALDH1L2Q3SY69 923 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 VPS53Q5VIR6 699 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 TTC19Q6DKK2 380 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-211ENST00000539921 CPLX2Q6PUV4 134 aaKnown RBP7.06□□□□□ -1.28
SNHG1-211ENST00000539921 DDX46Q7L014 1031 aaKnown RBP7.06□□□□□ -1.28
SNHG1-211ENST00000539921 DRC7Q8IY82 874 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 EFCAB3Q8N7B9 438 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms