RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 CHGBP05060 677 aa13.52□□□□□ -0.25
CTCFL-212ENST00000539382 RFC4P35249 363 aa13.52□□□□□ -0.25
CTCFL-212ENST00000539382 SLC27A3Q5K4L6 730 aa13.52□□□□□ -0.25
CTCFL-212ENST00000539382 EVI5LQ96CN4 794 aa13.52□□□□□ -0.25
CTCFL-212ENST00000539382 TBC1D2Q9BYX2 928 aa13.52□□□□□ -0.25
CTCFL-212ENST00000539382 RGL2O15211 777 aa13.51□□□□□ -0.25
CTCFL-212ENST00000539382 CWC27Q6UX04 472 aaKnown RBP13.51□□□□□ -0.25
CTCFL-212ENST00000539382 SETDB2Q96T68 719 aa13.51□□□□□ -0.25
CTCFL-212ENST00000539382 SNAP23O00161 211 aa13.51□□□□□ -0.25
CTCFL-212ENST00000539382 REC8O95072 547 aa13.51□□□□□ -0.25
CTCFL-212ENST00000539382 CNNM1Q9NRU3 951 aa13.51□□□□□ -0.25
CTCFL-212ENST00000539382 UBR3Q6ZT12 1888 aa13.5□□□□□ -0.25
CTCFL-212ENST00000539382 SGSM2O43147 1006 aa13.5□□□□□ -0.25
CTCFL-212ENST00000539382 CD2BP2O95400 341 aaKnown RBP13.5□□□□□ -0.25
CTCFL-212ENST00000539382 METTL24Q5JXM2 366 aa13.5□□□□□ -0.25
CTCFL-212ENST00000539382 HELBQ8NG08 1087 aaPredicted RBP13.5□□□□□ -0.25
CTCFL-212ENST00000539382 XAGE2Q96GT9 111 aa13.5□□□□□ -0.25
CTCFL-212ENST00000539382 FAM227BQ96M60 508 aa13.5□□□□□ -0.25
CTCFL-212ENST00000539382 HAUS7Q99871 368 aa13.5□□□□□ -0.25
CTCFL-212ENST00000539382 ANO2Q9NQ90 1003 aa13.5□□□□□ -0.25
CTCFL-212ENST00000539382 LRP5O75197 1615 aa13.5□□□□□ -0.25
CTCFL-212ENST00000539382 LAMB2P55268 1798 aa13.49□□□□□ -0.25
CTCFL-212ENST00000539382 APBA3O96018 575 aa13.49□□□□□ -0.25
CTCFL-212ENST00000539382 NFIXQ14938 502 aa13.49□□□□□ -0.25
CTCFL-212ENST00000539382 CCDC152Q4G0S7 254 aa13.49□□□□□ -0.25
CTCFL-212ENST00000539382 FBXO41Q8TF61 875 aa13.49□□□□□ -0.25
CTCFL-212ENST00000539382 DNAJC2Q99543 621 aaKnown RBP13.49□□□□□ -0.25
CTCFL-212ENST00000539382 SCARF1Q14162 830 aa13.48□□□□□ -0.25
CTCFL-212ENST00000539382 SLC10A5Q5PT55 438 aa13.48□□□□□ -0.25
CTCFL-212ENST00000539382 NBPF5PQ86XG9 351 aaPredicted RBP13.48□□□□□ -0.25
CTCFL-212ENST00000539382 PALD1Q9ULE6 856 aa13.48□□□□□ -0.25
CTCFL-212ENST00000539382 COL24A1Q17RW2 1714 aa13.48□□□□□ -0.25
CTCFL-212ENST00000539382 TAF1P21675 1872 aa13.48□□□□□ -0.25
CTCFL-212ENST00000539382 PDE8BO95263 885 aa13.48□□□□□ -0.25
CTCFL-212ENST00000539382 GYS1P13807 737 aa13.48□□□□□ -0.25
CTCFL-212ENST00000539382 ZNF827Q17R98 1081 aa13.48□□□□□ -0.25
CTCFL-212ENST00000539382 DDX46Q7L014 1031 aaKnown RBP13.48□□□□□ -0.25
CTCFL-212ENST00000539382 RTL9Q8NET4 1388 aa13.48□□□□□ -0.25
CTCFL-212ENST00000539382 PLSCR1O15162 318 aa13.47□□□□□ -0.25
CTCFL-212ENST00000539382 TAF5LO75529 589 aa13.47□□□□□ -0.25
CTCFL-212ENST00000539382 NMIQ13287 307 aaPredicted RBP13.47□□□□□ -0.25
CTCFL-212ENST00000539382 SF3B3Q15393 1217 aaKnown RBP13.47□□□□□ -0.25
CTCFL-212ENST00000539382 ATP2B3Q16720 1220 aa13.47□□□□□ -0.25
CTCFL-212ENST00000539382 SLFNL1Q499Z3 407 aa13.47□□□□□ -0.25
CTCFL-212ENST00000539382 FSD1Q9BTV5 496 aa13.47□□□□□ -0.25
CTCFL-212ENST00000539382 DIAPH3Q9NSV4 1193 aa13.47□□□□□ -0.25
CTCFL-212ENST00000539382 AKAP2Q9Y2D5 859 aa13.47□□□□□ -0.25
CTCFL-212ENST00000539382 A0A0D9SFI3 127 aa13.47□□□□□ -0.25
CTCFL-212ENST00000539382 WTIPA6NIX2 430 aaPredicted RBP13.47□□□□□ -0.25
CTCFL-212ENST00000539382 GTF2E1P29083 439 aaPredicted RBP13.47□□□□□ -0.25
CTCFL-212ENST00000539382 DEKP35659 375 aaKnown RBP13.47□□□□□ -0.25
CTCFL-212ENST00000539382 LSG1Q9H089 658 aaKnown RBP13.47□□□□□ -0.25
CTCFL-212ENST00000539382 ANTXR1Q9H6X2 564 aa13.47□□□□□ -0.25
CTCFL-212ENST00000539382 CASZ1Q86V15 1759 aa13.46□□□□□ -0.25
CTCFL-212ENST00000539382 FGFR2P21802 821 aa13.46□□□□□ -0.25
CTCFL-212ENST00000539382 SSFA2P28290 1259 aa13.46□□□□□ -0.25
CTCFL-212ENST00000539382 PI16Q6UXB8 463 aa13.46□□□□□ -0.25
CTCFL-212ENST00000539382 MPHOSPH8Q99549 860 aa13.46□□□□□ -0.25
CTCFL-212ENST00000539382 GOLIM4O00461 696 aa13.46□□□□□ -0.26
CTCFL-212ENST00000539382 PTH1RQ03431 593 aa13.46□□□□□ -0.26
CTCFL-212ENST00000539382 TPTE2Q6XPS3 522 aa13.46□□□□□ -0.26
CTCFL-212ENST00000539382 CELF1Q92879 486 aaKnown RBP13.46□□□□□ -0.26
CTCFL-212ENST00000539382 NYXQ9GZU5 481 aa13.46□□□□□ -0.26
CTCFL-212ENST00000539382 SNRKQ9NRH2 765 aa13.46□□□□□ -0.26
CTCFL-212ENST00000539382 SPEF2Q9C093 1822 aa13.45□□□□□ -0.26
CTCFL-212ENST00000539382 EIF5BO60841 1220 aaKnown RBP13.45□□□□□ -0.26
CTCFL-212ENST00000539382 ECM2O94769 699 aaPredicted RBP13.45□□□□□ -0.26
CTCFL-212ENST00000539382 IFIT1P09914 478 aaKnown RBP13.45□□□□□ -0.26
CTCFL-212ENST00000539382 HSP90B1P14625 803 aaKnown RBP13.45□□□□□ -0.26
CTCFL-212ENST00000539382 TM4SF1P30408 202 aa13.44□□□□□ -0.26
CTCFL-212ENST00000539382 BECN1Q14457 450 aa13.44□□□□□ -0.26
CTCFL-212ENST00000539382 ZNF589Q86UQ0 364 aaPredicted RBP13.44□□□□□ -0.26
CTCFL-212ENST00000539382 SLC51AQ86UW1 340 aa13.44□□□□□ -0.26
CTCFL-212ENST00000539382 AKT1S1Q96B36 256 aa13.44□□□□□ -0.26
CTCFL-212ENST00000539382 SEC62Q99442 399 aaKnown RBP13.44□□□□□ -0.26
CTCFL-212ENST00000539382 PAG1Q9NWQ8 432 aa13.44□□□□□ -0.26
CTCFL-212ENST00000539382 MROH5Q6ZUA9 1318 aa13.44□□□□□ -0.26
CTCFL-212ENST00000539382 IGHMBP2P38935 993 aaKnown RBP13.44□□□□□ -0.26
CTCFL-212ENST00000539382 CHRNDQ07001 517 aa13.44□□□□□ -0.26
CTCFL-212ENST00000539382 GORABQ5T7V8 394 aa13.44□□□□□ -0.26
CTCFL-212ENST00000539382 KBTBD3Q8NAB2 608 aa13.44□□□□□ -0.26
CTCFL-212ENST00000539382 SNX21Q969T3 373 aa13.44□□□□□ -0.26
CTCFL-212ENST00000539382 RAD50Q92878 1312 aa13.44□□□□□ -0.26
CTCFL-212ENST00000539382 MCAMP43121 646 aa13.43□□□□□ -0.26
CTCFL-212ENST00000539382 PHKA1P46020 1223 aa13.43□□□□□ -0.26
CTCFL-212ENST00000539382 FKBP4Q02790 459 aaKnown RBP eCLIP13.43□□□□□ -0.26
CTCFL-212ENST00000539382 PUM3Q15397 648 aaKnown RBP13.43□□□□□ -0.26
CTCFL-212ENST00000539382 CCDC158Q5M9N0 1113 aa13.43□□□□□ -0.26
CTCFL-212ENST00000539382 TTC39AQ5SRH9 613 aa13.43□□□□□ -0.26
CTCFL-212ENST00000539382 SPRYD3Q8NCJ5 442 aa13.43□□□□□ -0.26
CTCFL-212ENST00000539382 CARMIL3Q8ND23 1372 aa13.43□□□□□ -0.26
CTCFL-212ENST00000539382 TNRC6CQ9HCJ0 1690 aaKnown RBP13.43□□□□□ -0.26
CTCFL-212ENST00000539382 HSPA4P34932 840 aa13.43□□□□□ -0.26
CTCFL-212ENST00000539382 ZAP70P43403 619 aa13.43□□□□□ -0.26
CTCFL-212ENST00000539382 NLRP3Q96P20 1036 aa13.43□□□□□ -0.26
CTCFL-212ENST00000539382 TNS1Q9HBL0 1735 aaKnown RBP13.43□□□□□ -0.26
CTCFL-212ENST00000539382 DDR1Q08345 913 aa13.42□□□□□ -0.26
CTCFL-212ENST00000539382 CCDC102BQ68D86 513 aa13.42□□□□□ -0.26
CTCFL-212ENST00000539382 PRR5LQ6MZQ0 368 aa13.42□□□□□ -0.26
CTCFL-212ENST00000539382 COL23A1Q86Y22 540 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms