RNA–Protein interactions for RNA: ENST00000539369.1

LDHC-206, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-206ENST00000539369 TNS4Q8IZW8 715 aa7.87□□□□□ -1.15
LDHC-206ENST00000539369 KRTAP4-7Q9BYR0 210 aa7.87□□□□□ -1.15
LDHC-206ENST00000539369 RNF112Q9ULX5 631 aa7.87□□□□□ -1.15
LDHC-206ENST00000539369 NPATQ14207 1427 aa7.86□□□□□ -1.15
LDHC-206ENST00000539369 CNTLNQ9NXG0 1405 aa7.86□□□□□ -1.15
LDHC-206ENST00000539369 MYO5CQ9NQX4 1742 aa7.86□□□□□ -1.15
LDHC-206ENST00000539369 ATP9BO43861 1147 aa7.86□□□□□ -1.15
LDHC-206ENST00000539369 ATP1A2P50993 1020 aa7.86□□□□□ -1.15
LDHC-206ENST00000539369 TEAD4Q15561 434 aa7.86□□□□□ -1.15
LDHC-206ENST00000539369 SH3PXD2AQ5TCZ1 1133 aa7.86□□□□□ -1.15
LDHC-206ENST00000539369 SLC9A9Q8IVB4 645 aa7.86□□□□□ -1.15
LDHC-206ENST00000539369 TPCN2Q8NHX9 752 aa7.86□□□□□ -1.15
LDHC-206ENST00000539369 KIAA1024Q9UPX6 916 aa7.86□□□□□ -1.15
LDHC-206ENST00000539369 ARID1BQ8NFD5 2236 aaPredicted RBP7.85□□□□□ -1.15
LDHC-206ENST00000539369 NOS2P35228 1153 aa7.85□□□□□ -1.15
LDHC-206ENST00000539369 CLDN10P78369 228 aa7.85□□□□□ -1.15
LDHC-206ENST00000539369 TBCELQ5QJ74 424 aa7.85□□□□□ -1.15
LDHC-206ENST00000539369 CCDC102BQ68D86 513 aa7.85□□□□□ -1.15
LDHC-206ENST00000539369 TCOF1Q13428 1488 aaKnown RBP7.85□□□□□ -1.15
LDHC-206ENST00000539369 TROQ12816 1431 aaPredicted RBP7.85□□□□□ -1.15
LDHC-206ENST00000539369 ZMYM3Q14202 1370 aa7.84□□□□□ -1.15
LDHC-206ENST00000539369 PLA2R1Q13018 1463 aa7.84□□□□□ -1.15
LDHC-206ENST00000539369 ZBTB7BO15156 539 aaPredicted RBP7.84□□□□□ -1.15
LDHC-206ENST00000539369 PIP4K2BP78356 416 aa7.84□□□□□ -1.15
LDHC-206ENST00000539369 TMEM132AQ24JP5 1023 aa7.84□□□□□ -1.15
LDHC-206ENST00000539369 LCE1DQ5T752 114 aa7.84□□□□□ -1.15
LDHC-206ENST00000539369 FMR1NBQ8N0W7 255 aaPredicted RBP7.84□□□□□ -1.15
LDHC-206ENST00000539369 CLUAP1Q96AJ1 413 aa7.84□□□□□ -1.15
LDHC-206ENST00000539369 ZNF232Q9UNY5 417 aa7.84□□□□□ -1.15
LDHC-206ENST00000539369 ABCC1P33527 1531 aa7.83□□□□□ -1.16
LDHC-206ENST00000539369 KCNQ4P56696 695 aa7.83□□□□□ -1.16
LDHC-206ENST00000539369 RAC1P63000 192 aa7.83□□□□□ -1.16
LDHC-206ENST00000539369 OGFOD1Q8N543 542 aa7.83□□□□□ -1.16
LDHC-206ENST00000539369 JPH1Q9HDC5 661 aaPredicted RBP7.83□□□□□ -1.16
LDHC-206ENST00000539369 BRD7Q9NPI1 651 aa7.83□□□□□ -1.16
LDHC-206ENST00000539369 MKRN1Q9UHC7 482 aaKnown RBP7.83□□□□□ -1.16
LDHC-206ENST00000539369 USP21Q9UK80 565 aa7.83□□□□□ -1.16
LDHC-206ENST00000539369 CDK11AQ9UQ88 783 aaPredicted RBP7.83□□□□□ -1.16
LDHC-206ENST00000539369 GPC6Q9Y625 555 aaPredicted RBP7.83□□□□□ -1.16
LDHC-206ENST00000539369 AFF1P51825 1210 aaKnown RBP7.82□□□□□ -1.16
LDHC-206ENST00000539369 PROSER2Q86WR7 435 aaPredicted RBP7.82□□□□□ -1.16
LDHC-206ENST00000539369 FNBP4Q8N3X1 1017 aaPredicted RBP7.82□□□□□ -1.16
LDHC-206ENST00000539369 LARGE2Q8N3Y3 721 aa7.82□□□□□ -1.16
LDHC-206ENST00000539369 NUDT8Q8WV74 236 aa7.82□□□□□ -1.16
LDHC-206ENST00000539369 GLMNQ92990 594 aa7.82□□□□□ -1.16
LDHC-206ENST00000539369 HSH2DQ96JZ2 352 aa7.82□□□□□ -1.16
LDHC-206ENST00000539369 FMNL2Q96PY5 1086 aa7.82□□□□□ -1.16
LDHC-206ENST00000539369 SLC6A14Q9UN76 642 aa7.82□□□□□ -1.16
LDHC-206ENST00000539369 KIDINS220Q9ULH0 1771 aa7.82□□□□□ -1.16
LDHC-206ENST00000539369 MYO3AQ8NEV4 1616 aa7.81□□□□□ -1.16
LDHC-206ENST00000539369 CEP170BQ9Y4F5 1589 aaPredicted RBP7.81□□□□□ -1.16
LDHC-206ENST00000539369 PTPRKQ15262 1439 aa7.81□□□□□ -1.16
LDHC-206ENST00000539369 FMN1Q68DA7 1419 aa7.81□□□□□ -1.16
LDHC-206ENST00000539369 SERTM1A2A2V5 107 aa7.81□□□□□ -1.16
LDHC-206ENST00000539369 NEUROD1Q13562 356 aa7.81□□□□□ -1.16
LDHC-206ENST00000539369 DMRTC2Q8IXT2 367 aaPredicted RBP7.81□□□□□ -1.16
LDHC-206ENST00000539369 TSPAN10Q9H1Z9 355 aaPredicted RBP7.81□□□□□ -1.16
LDHC-206ENST00000539369 NEUROD4Q9HD90 331 aa7.81□□□□□ -1.16
LDHC-206ENST00000539369 NAGPAQ9UK23 515 aa7.81□□□□□ -1.16
LDHC-206ENST00000539369 CDC42BPBQ9Y5S2 1711 aa7.81□□□□□ -1.16
LDHC-206ENST00000539369 MROH2AA6NES4 1674 aa7.8□□□□□ -1.16
LDHC-206ENST00000539369 ZNF142P52746 1687 aaPredicted RBP7.8□□□□□ -1.16
LDHC-206ENST00000539369 CLIP1P30622 1438 aa7.8□□□□□ -1.16
LDHC-206ENST00000539369 EEA1Q15075 1411 aa7.8□□□□□ -1.16
LDHC-206ENST00000539369 PALM3A6NDB9 673 aaPredicted RBP7.8□□□□□ -1.16
LDHC-206ENST00000539369 TOM1O60784 492 aa7.8□□□□□ -1.16
LDHC-206ENST00000539369 TYRO3Q06418 890 aa7.8□□□□□ -1.16
LDHC-206ENST00000539369 SIX5Q8N196 739 aa7.8□□□□□ -1.16
LDHC-206ENST00000539369 RHPN1Q8TCX5 695 aa7.8□□□□□ -1.16
LDHC-206ENST00000539369 WFDC12Q8WWY7 111 aa7.8□□□□□ -1.16
LDHC-206ENST00000539369 BHMTQ93088 406 aa7.8□□□□□ -1.16
LDHC-206ENST00000539369 ZNF594Q96JF6 807 aaPredicted RBP7.8□□□□□ -1.16
LDHC-206ENST00000539369 CEP63Q96MT8 703 aa7.8□□□□□ -1.16
LDHC-206ENST00000539369 ARHGAP35Q9NRY4 1499 aa7.8□□□□□ -1.16
LDHC-206ENST00000539369 ITSN2Q9NZM3 1697 aa7.79□□□□□ -1.16
LDHC-206ENST00000539369 PREX2Q70Z35 1606 aa7.79□□□□□ -1.16
LDHC-206ENST00000539369 ALKQ9UM73 1620 aa7.79□□□□□ -1.16
LDHC-206ENST00000539369 M0R2N6 131 aa7.79□□□□□ -1.16
LDHC-206ENST00000539369 NOS3P29474 1203 aa7.79□□□□□ -1.16
LDHC-206ENST00000539369 PSMA6P60900 246 aaKnown RBP7.79□□□□□ -1.16
LDHC-206ENST00000539369 TBC1D8BQ0IIM8 1120 aa7.79□□□□□ -1.16
LDHC-206ENST00000539369 TSEN2Q8NCE0 465 aaKnown RBP7.79□□□□□ -1.16
LDHC-206ENST00000539369 ZNF280CQ8ND82 737 aa7.79□□□□□ -1.16
LDHC-206ENST00000539369 KCNH4Q9UQ05 1017 aa7.79□□□□□ -1.16
LDHC-206ENST00000539369 SAMD9LQ8IVG5 1584 aa7.79□□□□□ -1.16
LDHC-206ENST00000539369 PAX4O43316 350 aa7.78□□□□□ -1.16
LDHC-206ENST00000539369 IREB2P48200 963 aaKnown RBP7.78□□□□□ -1.16
LDHC-206ENST00000539369 MEGF10Q96KG7 1140 aa7.78□□□□□ -1.16
LDHC-206ENST00000539369 UBE2OQ9C0C9 1292 aaKnown RBP7.78□□□□□ -1.16
LDHC-206ENST00000539369 PCMTD2Q9NV79 361 aa7.78□□□□□ -1.16
LDHC-206ENST00000539369 TFIP11Q9UBB9 837 aaKnown RBP7.78□□□□□ -1.16
LDHC-206ENST00000539369 CHMP3Q9Y3E7 222 aa7.78□□□□□ -1.16
LDHC-206ENST00000539369 RBM19Q9Y4C8 960 aaKnown RBP7.78□□□□□ -1.16
LDHC-206ENST00000539369 CPS1P31327 1500 aa7.78□□□□□ -1.16
LDHC-206ENST00000539369 CLTCQ00610 1675 aaKnown RBP7.77□□□□□ -1.17
LDHC-206ENST00000539369 A2ML1A8K2U0 1454 aa7.77□□□□□ -1.17
LDHC-206ENST00000539369 SHANK2Q9UPX8 1470 aa7.77□□□□□ -1.17
LDHC-206ENST00000539369 SFI1A8K8P3 1242 aa7.77□□□□□ -1.17
LDHC-206ENST00000539369 COBLO75128 1261 aa7.77□□□□□ -1.17
LDHC-206ENST00000539369 DKK1O94907 266 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms