RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 ENGASEQ8NFI3 743 aa20.13■□□□□ 0.81
C2CD3-213ENST00000539061 DHX8Q14562 1220 aaKnown RBP20.13■□□□□ 0.81
C2CD3-213ENST00000539061 ATL3Q6DD88 541 aa20.13■□□□□ 0.81
C2CD3-213ENST00000539061 SYT10Q6XYQ8 523 aa20.13■□□□□ 0.81
C2CD3-213ENST00000539061 Q6ZUG5 572 aa20.13■□□□□ 0.81
C2CD3-213ENST00000539061 LLPHQ9BRT6 129 aaKnown RBP20.13■□□□□ 0.81
C2CD3-213ENST00000539061 NRDCO43847 1150 aa20.12■□□□□ 0.81
C2CD3-213ENST00000539061 ANXA1P04083 346 aa20.12■□□□□ 0.81
C2CD3-213ENST00000539061 KCNJ6P48051 423 aa20.12■□□□□ 0.81
C2CD3-213ENST00000539061 SMARCC2Q8TAQ2 1214 aa20.12■□□□□ 0.81
C2CD3-213ENST00000539061 ZNF396Q96N95 335 aaPredicted RBP20.12■□□□□ 0.81
C2CD3-213ENST00000539061 A0A087WWV3 80 aa20.12■□□□□ 0.81
C2CD3-213ENST00000539061 HOXC9P31274 260 aa20.12■□□□□ 0.81
C2CD3-213ENST00000539061 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.12■□□□□ 0.81
C2CD3-213ENST00000539061 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.11■□□□□ 0.81
C2CD3-213ENST00000539061 TULP2O00295 520 aa20.11■□□□□ 0.81
C2CD3-213ENST00000539061 PNMA6AP0CW24 399 aaPredicted RBP20.11■□□□□ 0.81
C2CD3-213ENST00000539061 SLC20A2Q08357 652 aa20.11■□□□□ 0.81
C2CD3-213ENST00000539061 FSIP1Q8NA03 581 aa20.11■□□□□ 0.81
C2CD3-213ENST00000539061 MAP3K2Q9Y2U5 619 aa20.11■□□□□ 0.81
C2CD3-213ENST00000539061 ARHGAP29Q52LW3 1261 aa20.11■□□□□ 0.81
C2CD3-213ENST00000539061 NGDNQ8NEJ9 315 aaKnown RBP20.11■□□□□ 0.81
C2CD3-213ENST00000539061 USP28Q96RU2 1077 aa20.11■□□□□ 0.81
C2CD3-213ENST00000539061 DNAJC2Q99543 621 aaKnown RBP20.11■□□□□ 0.81
C2CD3-213ENST00000539061 ARGLU1Q9NWB6 273 aaPredicted RBP20.11■□□□□ 0.81
C2CD3-213ENST00000539061 TLR7Q9NYK1 1049 aaKnown RBP20.11■□□□□ 0.81
C2CD3-213ENST00000539061 CEMIPQ8WUJ3 1361 aa20.11■□□□□ 0.81
C2CD3-213ENST00000539061 SFPQP23246 707 aaKnown RBP eCLIP20.1■□□□□ 0.81
C2CD3-213ENST00000539061 SCRN1Q12765 414 aa20.1■□□□□ 0.81
C2CD3-213ENST00000539061 FTOQ9C0B1 505 aaKnown RBP eCLIP20.1■□□□□ 0.81
C2CD3-213ENST00000539061 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.1■□□□□ 0.81
C2CD3-213ENST00000539061 FER1L4A9Z1Z3 1794 aa20.1■□□□□ 0.81
C2CD3-213ENST00000539061 DBF4Q9UBU7 674 aaPredicted RBP20.1■□□□□ 0.81
C2CD3-213ENST00000539061 ME1P48163 572 aa20.09■□□□□ 0.81
C2CD3-213ENST00000539061 PLA2G4AP47712 749 aa20.09■□□□□ 0.81
C2CD3-213ENST00000539061 TEX35Q5T0J7 233 aa20.09■□□□□ 0.81
C2CD3-213ENST00000539061 ARMCX5Q6P1M9 558 aa20.09■□□□□ 0.81
C2CD3-213ENST00000539061 TMC6Q7Z403 805 aa20.09■□□□□ 0.81
C2CD3-213ENST00000539061 LRRN4CLQ8ND94 238 aa20.09■□□□□ 0.81
C2CD3-213ENST00000539061 LTV1Q96GA3 475 aaPredicted RBP20.09■□□□□ 0.81
C2CD3-213ENST00000539061 SDF4Q9BRK5 362 aa20.09■□□□□ 0.81
C2CD3-213ENST00000539061 NWD1Q149M9 1564 aa20.08■□□□□ 0.81
C2CD3-213ENST00000539061 PFKFB2O60825 505 aa20.08■□□□□ 0.81
C2CD3-213ENST00000539061 SMC2O95347 1197 aa20.08■□□□□ 0.81
C2CD3-213ENST00000539061 NLRP6P59044 892 aa20.08■□□□□ 0.81
C2CD3-213ENST00000539061 ZRSR1Q15695 479 aaKnown RBP20.08■□□□□ 0.81
C2CD3-213ENST00000539061 TMCO3Q6UWJ1 677 aa20.08■□□□□ 0.81
C2CD3-213ENST00000539061 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.08■□□□□ 0.81
C2CD3-213ENST00000539061 U3KPZ7 1027 aaPredicted RBP20.08■□□□□ 0.81
C2CD3-213ENST00000539061 KSR2Q6VAB6 950 aa20.08■□□□□ 0.8
C2CD3-213ENST00000539061 UBXN4Q92575 508 aa20.08■□□□□ 0.8
C2CD3-213ENST00000539061 FBXW7Q969H0 707 aa20.08■□□□□ 0.8
C2CD3-213ENST00000539061 XPO4Q9C0E2 1151 aaKnown RBP20.08■□□□□ 0.8
C2CD3-213ENST00000539061 CCP110O43303 1012 aa20.07■□□□□ 0.8
C2CD3-213ENST00000539061 HNRNPH2P55795 449 aaKnown RBP20.07■□□□□ 0.8
C2CD3-213ENST00000539061 HOMER1Q86YM7 354 aa20.07■□□□□ 0.8
C2CD3-213ENST00000539061 NSUN7Q8NE18 718 aaKnown RBP20.07■□□□□ 0.8
C2CD3-213ENST00000539061 BPIFA3Q9BQP9 254 aa20.07■□□□□ 0.8
C2CD3-213ENST00000539061 IFNKQ9P0W0 207 aa20.07■□□□□ 0.8
C2CD3-213ENST00000539061 KCNQ3O43525 872 aa20.07■□□□□ 0.8
C2CD3-213ENST00000539061 ZRANB2O95218 330 aaKnown RBP eCLIP20.07■□□□□ 0.8
C2CD3-213ENST00000539061 TPM4P67936 248 aa20.07■□□□□ 0.8
C2CD3-213ENST00000539061 CWF19L2Q2TBE0 894 aaKnown RBP20.07■□□□□ 0.8
C2CD3-213ENST00000539061 ERCC4Q92889 916 aaPredicted RBP20.07■□□□□ 0.8
C2CD3-213ENST00000539061 SYTL4Q96C24 671 aaPredicted RBP20.07■□□□□ 0.8
C2CD3-213ENST00000539061 FOSBP53539 338 aa20.06■□□□□ 0.8
C2CD3-213ENST00000539061 ETF1P62495 437 aaKnown RBP20.06■□□□□ 0.8
C2CD3-213ENST00000539061 MRPS27Q92552 414 aaKnown RBP20.06■□□□□ 0.8
C2CD3-213ENST00000539061 SUCLG2Q96I99 432 aa20.06■□□□□ 0.8
C2CD3-213ENST00000539061 TSPYL1Q9H0U9 437 aa20.06■□□□□ 0.8
C2CD3-213ENST00000539061 LGR6Q9HBX8 967 aa20.06■□□□□ 0.8
C2CD3-213ENST00000539061 FMR1NBQ8N0W7 255 aaPredicted RBP20.06■□□□□ 0.8
C2CD3-213ENST00000539061 GRM8O00222 908 aa20.05■□□□□ 0.8
C2CD3-213ENST00000539061 SRRTQ9BXP5 876 aaKnown RBP20.05■□□□□ 0.8
C2CD3-213ENST00000539061 BICC1Q9H694 974 aaKnown RBP20.05■□□□□ 0.8
C2CD3-213ENST00000539061 ORC3Q9UBD5 711 aaPredicted RBP20.05■□□□□ 0.8
C2CD3-213ENST00000539061 PTPDC1A2A3K4 754 aa20.05■□□□□ 0.8
C2CD3-213ENST00000539061 VGLL3A8MV65 326 aa20.05■□□□□ 0.8
C2CD3-213ENST00000539061 KIAA1468Q9P260 1216 aa20.05■□□□□ 0.8
C2CD3-213ENST00000539061 PHLPP2Q6ZVD8 1323 aa20.05■□□□□ 0.8
C2CD3-213ENST00000539061 CYP21A2P08686 494 aa20.04■□□□□ 0.8
C2CD3-213ENST00000539061 CAPN2P17655 700 aa20.04■□□□□ 0.8
C2CD3-213ENST00000539061 LTKP29376 864 aa20.04■□□□□ 0.8
C2CD3-213ENST00000539061 LRRC2Q9BYS8 371 aa20.04■□□□□ 0.8
C2CD3-213ENST00000539061 SIL1Q9H173 461 aa20.04■□□□□ 0.8
C2CD3-213ENST00000539061 HMGB1P09429 215 aaKnown RBP20.04■□□□□ 0.8
C2CD3-213ENST00000539061 GORABQ5T7V8 394 aa20.04■□□□□ 0.8
C2CD3-213ENST00000539061 ADALQ6DHV7 355 aa20.04■□□□□ 0.8
C2CD3-213ENST00000539061 USHBP1Q8N6Y0 703 aa20.04■□□□□ 0.8
C2CD3-213ENST00000539061 MNS1Q8NEH6 495 aa20.04■□□□□ 0.8
C2CD3-213ENST00000539061 KAZALD1Q96I82 304 aa20.04■□□□□ 0.8
C2CD3-213ENST00000539061 DNAI1Q9UI46 699 aa20.04■□□□□ 0.8
C2CD3-213ENST00000539061 TMEM2Q9UHN6 1383 aa20.04■□□□□ 0.8
C2CD3-213ENST00000539061 BTBD11A6QL63 1104 aa20.04■□□□□ 0.8
C2CD3-213ENST00000539061 ATP8B1O43520 1251 aa20.04■□□□□ 0.8
C2CD3-213ENST00000539061 TPM1P09493 284 aa20.04■□□□□ 0.8
C2CD3-213ENST00000539061 TEFQ10587 303 aa20.04■□□□□ 0.8
C2CD3-213ENST00000539061 LINS1Q8NG48 757 aa20.04■□□□□ 0.8
C2CD3-213ENST00000539061 EDC3Q96F86 508 aaKnown RBP20.04■□□□□ 0.8
C2CD3-213ENST00000539061 PCDHA7Q9UN72 937 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms