RNA–Protein interactions for RNA: ENST00000538725.1

MSRB3-208, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 4

Gene MSRB3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-208ENST00000538725 DEFB115Q30KQ5 88 aa25.94■■□□□ 1.74
MSRB3-208ENST00000538725 COL13A1Q5TAT6 717 aaPredicted RBP25.94■■□□□ 1.74
MSRB3-208ENST00000538725 ANKRD18AQ8IVF6 992 aa25.94■■□□□ 1.74
MSRB3-208ENST00000538725 FAM9BQ8IZU0 186 aa25.94■■□□□ 1.74
MSRB3-208ENST00000538725 CACNA1FO60840 1977 aa25.94■■□□□ 1.74
MSRB3-208ENST00000538725 H7C1D1 291 aa25.93■■□□□ 1.74
MSRB3-208ENST00000538725 PSMD14O00487 310 aa25.93■■□□□ 1.74
MSRB3-208ENST00000538725 VEGFBP49765 207 aa25.93■■□□□ 1.74
MSRB3-208ENST00000538725 CTSWP56202 376 aa25.93■■□□□ 1.74
MSRB3-208ENST00000538725 EXOSC9Q06265 439 aaKnown RBP25.93■■□□□ 1.74
MSRB3-208ENST00000538725 DOK7Q18PE1 504 aa25.93■■□□□ 1.74
MSRB3-208ENST00000538725 TTLL11Q8NHH1 800 aa25.93■■□□□ 1.74
MSRB3-208ENST00000538725 DPF2Q92785 391 aa25.93■■□□□ 1.74
MSRB3-208ENST00000538725 PGAP2Q9UHJ9 254 aa25.93■■□□□ 1.74
MSRB3-208ENST00000538725 GGA1Q9UJY5 639 aa25.93■■□□□ 1.74
MSRB3-208ENST00000538725 RASSF10A6NK89 507 aa25.92■■□□□ 1.74
MSRB3-208ENST00000538725 H7C1W4 665 aa25.92■■□□□ 1.74
MSRB3-208ENST00000538725 ECE2O60344 883 aa25.92■■□□□ 1.74
MSRB3-208ENST00000538725 FMR1Q06787 632 aaKnown RBP eCLIP25.92■■□□□ 1.74
MSRB3-208ENST00000538725 ZC3H15Q8WU90 426 aaKnown RBP25.92■■□□□ 1.74
MSRB3-208ENST00000538725 GPR101Q96P66 508 aaPredicted RBP25.92■■□□□ 1.74
MSRB3-208ENST00000538725 ZBTB12Q9Y330 459 aaPredicted RBP25.92■■□□□ 1.74
MSRB3-208ENST00000538725 UFL1O94874 794 aa25.91■■□□□ 1.74
MSRB3-208ENST00000538725 HIRAP54198 1017 aaPredicted RBP25.91■■□□□ 1.74
MSRB3-208ENST00000538725 FKBP5Q13451 457 aaPredicted RBP25.91■■□□□ 1.74
MSRB3-208ENST00000538725 CDC5LQ99459 802 aaKnown RBP25.91■■□□□ 1.74
MSRB3-208ENST00000538725 KCNQ5Q9NR82 932 aa25.91■■□□□ 1.74
MSRB3-208ENST00000538725 ABT1Q9ULW3 272 aaKnown RBP25.91■■□□□ 1.74
MSRB3-208ENST00000538725 G3V3G9 751 aa25.9■■□□□ 1.74
MSRB3-208ENST00000538725 TRAF5O00463 557 aa25.9■■□□□ 1.74
MSRB3-208ENST00000538725 DCAF8Q5TAQ9 597 aa25.9■■□□□ 1.74
MSRB3-208ENST00000538725 GCKRQ14397 625 aa25.89■■□□□ 1.74
MSRB3-208ENST00000538725 CST9Q5W186 159 aa25.89■■□□□ 1.74
MSRB3-208ENST00000538725 UBE3BQ7Z3V4 1068 aa25.89■■□□□ 1.74
MSRB3-208ENST00000538725 MICALL2Q8IY33 904 aa25.89■■□□□ 1.74
MSRB3-208ENST00000538725 DNAAF4Q8WXU2 420 aa25.89■■□□□ 1.74
MSRB3-208ENST00000538725 SPINK5Q9NQ38 1064 aaPredicted RBP25.89■■□□□ 1.74
MSRB3-208ENST00000538725 XDHP47989 1333 aa25.88■■□□□ 1.73
MSRB3-208ENST00000538725 MYH3P11055 1940 aa25.88■■□□□ 1.73
MSRB3-208ENST00000538725 TRPM7Q96QT4 1865 aa25.88■■□□□ 1.73
MSRB3-208ENST00000538725 SHTN1A0MZ66 631 aa25.88■■□□□ 1.73
MSRB3-208ENST00000538725 RPS12P25398 132 aaKnown RBP25.88■■□□□ 1.73
MSRB3-208ENST00000538725 TRPM4Q8TD43 1214 aa25.88■■□□□ 1.73
MSRB3-208ENST00000538725 GREM2Q9H772 168 aa25.88■■□□□ 1.73
MSRB3-208ENST00000538725 BSDC1Q9NW68 430 aaPredicted RBP25.88■■□□□ 1.73
MSRB3-208ENST00000538725 LINS1Q8NG48 757 aa25.87■■□□□ 1.73
MSRB3-208ENST00000538725 MYH16Q9H6N6 1097 aa25.87■■□□□ 1.73
MSRB3-208ENST00000538725 RTL9Q8NET4 1388 aa25.86■■□□□ 1.73
MSRB3-208ENST00000538725 VIL1P09327 827 aaKnown RBP25.86■■□□□ 1.73
MSRB3-208ENST00000538725 ATP2B4P23634 1241 aa25.86■■□□□ 1.73
MSRB3-208ENST00000538725 PLA2G12BQ9BX93 195 aa25.86■■□□□ 1.73
MSRB3-208ENST00000538725 CDC37L1Q7L3B6 337 aa25.85■■□□□ 1.73
MSRB3-208ENST00000538725 SAMD7Q7Z3H4 446 aa25.85■■□□□ 1.73
MSRB3-208ENST00000538725 GLIS2Q9BZE0 524 aaPredicted RBP25.85■■□□□ 1.73
MSRB3-208ENST00000538725 MINPP1Q9UNW1 487 aa25.85■■□□□ 1.73
MSRB3-208ENST00000538725 WDR33Q9C0J8 1336 aaKnown RBP25.85■■□□□ 1.73
MSRB3-208ENST00000538725 CASP7P55210 303 aa25.84■■□□□ 1.73
MSRB3-208ENST00000538725 TLL2Q9Y6L7 1015 aa25.83■■□□□ 1.73
MSRB3-208ENST00000538725 CELF2O95319 508 aaKnown RBP25.82■■□□□ 1.72
MSRB3-208ENST00000538725 CSF1RP07333 972 aa25.82■■□□□ 1.72
MSRB3-208ENST00000538725 TBC1D10BQ4KMP7 808 aaPredicted RBP25.82■■□□□ 1.72
MSRB3-208ENST00000538725 WBP1LQ9NX94 342 aa25.82■■□□□ 1.72
MSRB3-208ENST00000538725 SCN9AQ15858 1988 aa25.82■■□□□ 1.72
MSRB3-208ENST00000538725 FOXN1O15353 648 aa25.81■■□□□ 1.72
MSRB3-208ENST00000538725 IGHMBP2P38935 993 aaKnown RBP25.81■■□□□ 1.72
MSRB3-208ENST00000538725 PODNQ7Z5L7 613 aa25.81■■□□□ 1.72
MSRB3-208ENST00000538725 AIDAQ96BJ3 306 aa25.81■■□□□ 1.72
MSRB3-208ENST00000538725 WTIPA6NIX2 430 aaPredicted RBP25.8■■□□□ 1.72
MSRB3-208ENST00000538725 ITGA6P23229 1130 aa25.8■■□□□ 1.72
MSRB3-208ENST00000538725 ECE1P42892 770 aa25.8■■□□□ 1.72
MSRB3-208ENST00000538725 RBM26Q5T8P6 1007 aaKnown RBP25.8■■□□□ 1.72
MSRB3-208ENST00000538725 USP48Q86UV5 1035 aa25.8■■□□□ 1.72
MSRB3-208ENST00000538725 TNS4Q8IZW8 715 aa25.8■■□□□ 1.72
MSRB3-208ENST00000538725 F6X3S4 739 aa25.79■■□□□ 1.72
MSRB3-208ENST00000538725 EGFRP00533 1210 aa25.79■■□□□ 1.72
MSRB3-208ENST00000538725 CCT4P50991 539 aaKnown RBP25.79■■□□□ 1.72
MSRB3-208ENST00000538725 RSBN1LQ6PCB5 846 aaPredicted RBP25.79■■□□□ 1.72
MSRB3-208ENST00000538725 AGBL3Q8NEM8 1001 aa25.79■■□□□ 1.72
MSRB3-208ENST00000538725 CAPNS2Q96L46 248 aa25.79■■□□□ 1.72
MSRB3-208ENST00000538725 MAP2K1Q02750 393 aaPredicted RBP25.78■■□□□ 1.72
MSRB3-208ENST00000538725 BEND3Q5T5X7 828 aa25.78■■□□□ 1.72
MSRB3-208ENST00000538725 PAXIP1Q6ZW49 1069 aaPredicted RBP25.78■■□□□ 1.72
MSRB3-208ENST00000538725 SAPCD2Q86UD0 394 aa25.78■■□□□ 1.72
MSRB3-208ENST00000538725 LEMD3Q9Y2U8 911 aa25.78■■□□□ 1.72
MSRB3-208ENST00000538725 SPEF2Q9C093 1822 aa25.78■■□□□ 1.72
MSRB3-208ENST00000538725 POLR2AP24928 1970 aaKnown RBP25.77■■□□□ 1.72
MSRB3-208ENST00000538725 CTCFP49711 727 aaPredicted RBP25.77■■□□□ 1.72
MSRB3-208ENST00000538725 CYP4F22Q6NT55 531 aa25.77■■□□□ 1.72
MSRB3-208ENST00000538725 MPHOSPH8Q99549 860 aa25.77■■□□□ 1.72
MSRB3-208ENST00000538725 USP17L3A6NCW0 530 aa25.76■■□□□ 1.71
MSRB3-208ENST00000538725 USP17L4A6NCW7 530 aa25.76■■□□□ 1.71
MSRB3-208ENST00000538725 FAM161AQ3B820 660 aa25.76■■□□□ 1.71
MSRB3-208ENST00000538725 USP17L1Q7RTZ2 530 aa25.76■■□□□ 1.71
MSRB3-208ENST00000538725 DCPSQ96C86 337 aaKnown RBP25.76■■□□□ 1.71
MSRB3-208ENST00000538725 ANKRD2Q9GZV1 360 aa25.76■■□□□ 1.71
MSRB3-208ENST00000538725 ZNF408Q9H9D4 720 aa25.76■■□□□ 1.71
MSRB3-208ENST00000538725 ZNF521Q96K83 1311 aa25.76■■□□□ 1.71
MSRB3-208ENST00000538725 MED23Q9ULK4 1368 aa25.76■■□□□ 1.71
MSRB3-208ENST00000538725 KIF4BQ2VIQ3 1234 aa25.75■■□□□ 1.71
MSRB3-208ENST00000538725 KRT26Q7Z3Y9 468 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms