RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 ERMNQ8TAM6 284 aa11.32□□□□□ -0.6
COL4A6-208ENST00000538570 NBPF7P0C2Y1 421 aaPredicted RBP11.32□□□□□ -0.6
COL4A6-208ENST00000538570 SKILP12757 684 aa11.32□□□□□ -0.6
COL4A6-208ENST00000538570 KCNG4Q8TDN1 519 aa11.32□□□□□ -0.6
COL4A6-208ENST00000538570 ZMAT2Q96NC0 199 aaKnown RBP11.32□□□□□ -0.6
COL4A6-208ENST00000538570 SPAG5Q96R06 1193 aa11.32□□□□□ -0.6
COL4A6-208ENST00000538570 CCDC77Q9BR77 488 aa11.32□□□□□ -0.6
COL4A6-208ENST00000538570 EBAG9O00559 213 aa11.31□□□□□ -0.6
COL4A6-208ENST00000538570 STAT6P42226 847 aa11.31□□□□□ -0.6
COL4A6-208ENST00000538570 KIF3CO14782 793 aa11.31□□□□□ -0.6
COL4A6-208ENST00000538570 SPAG1Q07617 926 aa11.31□□□□□ -0.6
COL4A6-208ENST00000538570 ANKS4BQ8N8V4 417 aa11.31□□□□□ -0.6
COL4A6-208ENST00000538570 TBC1D32Q96NH3 1257 aa11.31□□□□□ -0.6
COL4A6-208ENST00000538570 RNF216Q9NWF9 866 aaPredicted RBP11.31□□□□□ -0.6
COL4A6-208ENST00000538570 DNAI1Q9UI46 699 aa11.31□□□□□ -0.6
COL4A6-208ENST00000538570 MPRIPQ6WCQ1 1025 aa11.31□□□□□ -0.6
COL4A6-208ENST00000538570 USP37Q86T82 979 aa11.31□□□□□ -0.6
COL4A6-208ENST00000538570 SYNCQ9H7C4 482 aa11.31□□□□□ -0.6
COL4A6-208ENST00000538570 CABP5Q9NP86 173 aa11.31□□□□□ -0.6
COL4A6-208ENST00000538570 TRMT1LQ7Z2T5 733 aaKnown RBP11.31□□□□□ -0.6
COL4A6-208ENST00000538570 RAB11FIP4Q86YS3 637 aa11.31□□□□□ -0.6
COL4A6-208ENST00000538570 VPS18Q9P253 973 aa11.31□□□□□ -0.6
COL4A6-208ENST00000538570 CCDC121Q6ZUS5 278 aa11.31□□□□□ -0.6
COL4A6-208ENST00000538570 FMNL3Q8IVF7 1028 aa11.31□□□□□ -0.6
COL4A6-208ENST00000538570 CDC5LQ99459 802 aaKnown RBP11.31□□□□□ -0.6
COL4A6-208ENST00000538570 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.31□□□□□ -0.6
COL4A6-208ENST00000538570 V9GYY5 206 aaPredicted RBP11.31□□□□□ -0.6
COL4A6-208ENST00000538570 TACC1O75410 805 aa11.3□□□□□ -0.6
COL4A6-208ENST00000538570 HLA-DOAP06340 250 aa11.3□□□□□ -0.6
COL4A6-208ENST00000538570 TTLL12Q14166 644 aaPredicted RBP11.3□□□□□ -0.6
COL4A6-208ENST00000538570 AFMP43652 599 aa11.3□□□□□ -0.6
COL4A6-208ENST00000538570 ATRIPQ8WXE1 791 aa11.3□□□□□ -0.6
COL4A6-208ENST00000538570 CWC25Q9NXE8 425 aaPredicted RBP11.3□□□□□ -0.6
COL4A6-208ENST00000538570 TUBB4AP04350 444 aa11.3□□□□□ -0.6
COL4A6-208ENST00000538570 CCDC129Q6ZRS4 1044 aa11.3□□□□□ -0.6
COL4A6-208ENST00000538570 TMX3Q96JJ7 454 aa11.3□□□□□ -0.6
COL4A6-208ENST00000538570 FAM184BQ9ULE4 1060 aa11.3□□□□□ -0.6
COL4A6-208ENST00000538570 CUL7Q14999 1698 aa11.3□□□□□ -0.6
COL4A6-208ENST00000538570 CTAGE9A4FU28 777 aa11.3□□□□□ -0.6
COL4A6-208ENST00000538570 SLU7O95391 586 aaKnown RBP11.3□□□□□ -0.6
COL4A6-208ENST00000538570 WTAPQ15007 396 aa11.3□□□□□ -0.6
COL4A6-208ENST00000538570 RAB3IL1Q8TBN0 382 aa11.3□□□□□ -0.6
COL4A6-208ENST00000538570 TTC14Q96N46 770 aa11.3□□□□□ -0.6
COL4A6-208ENST00000538570 LDHAL6AQ6ZMR3 332 aa11.3□□□□□ -0.6
COL4A6-208ENST00000538570 NBPF11Q86T75 865 aa11.3□□□□□ -0.6
COL4A6-208ENST00000538570 GRIN2AQ12879 1464 aa11.29□□□□□ -0.6
COL4A6-208ENST00000538570 KLF18A0A0U1RQI7 1052 aa11.29□□□□□ -0.6
COL4A6-208ENST00000538570 KRT13P13646 458 aa11.29□□□□□ -0.6
COL4A6-208ENST00000538570 GOLGA1Q92805 767 aa11.29□□□□□ -0.6
COL4A6-208ENST00000538570 KRT23Q9C075 422 aa11.29□□□□□ -0.6
COL4A6-208ENST00000538570 PLB1Q6P1J6 1458 aa11.29□□□□□ -0.6
COL4A6-208ENST00000538570 CD109Q6YHK3 1445 aa11.29□□□□□ -0.6
COL4A6-208ENST00000538570 SNRKQ9NRH2 765 aa11.29□□□□□ -0.6
COL4A6-208ENST00000538570 PIK3R4Q99570 1358 aa11.29□□□□□ -0.6
COL4A6-208ENST00000538570 FAM200AQ8TCP9 573 aa11.29□□□□□ -0.6
COL4A6-208ENST00000538570 LMBR1Q8WVP7 490 aa11.29□□□□□ -0.6
COL4A6-208ENST00000538570 MRPS27Q92552 414 aaKnown RBP11.29□□□□□ -0.6
COL4A6-208ENST00000538570 CRNKL1Q9BZJ0 848 aaKnown RBP11.29□□□□□ -0.6
COL4A6-208ENST00000538570 SMC6Q96SB8 1091 aa11.29□□□□□ -0.6
COL4A6-208ENST00000538570 MPHOSPH6Q99547 160 aaKnown RBP11.29□□□□□ -0.6
COL4A6-208ENST00000538570 ALG1Q9BT22 464 aa11.29□□□□□ -0.6
COL4A6-208ENST00000538570 CNPY2Q9Y2B0 182 aa11.29□□□□□ -0.6
COL4A6-208ENST00000538570 UQCRFS1P1P0C7P4 283 aa11.29□□□□□ -0.6
COL4A6-208ENST00000538570 GPTP24298 496 aa11.29□□□□□ -0.6
COL4A6-208ENST00000538570 CCDC186Q7Z3E2 898 aa11.29□□□□□ -0.6
COL4A6-208ENST00000538570 NME9Q86XW9 330 aa11.29□□□□□ -0.6
COL4A6-208ENST00000538570 NAP1L3Q99457 506 aaPredicted RBP11.29□□□□□ -0.6
COL4A6-208ENST00000538570 MYCNP04198 464 aaPredicted RBP11.28□□□□□ -0.6
COL4A6-208ENST00000538570 PPP1R42Q7Z4L9 355 aa11.28□□□□□ -0.6
COL4A6-208ENST00000538570 ZBTB3Q9H5J0 574 aa11.28□□□□□ -0.6
COL4A6-208ENST00000538570 RRAGDQ9NQL2 400 aaPredicted RBP11.28□□□□□ -0.6
COL4A6-208ENST00000538570 C6orf229H3BNL8 230 aa11.28□□□□□ -0.6
COL4A6-208ENST00000538570 ATP2A1O14983 1001 aa11.28□□□□□ -0.6
COL4A6-208ENST00000538570 ZBTB43O43298 467 aa11.28□□□□□ -0.6
COL4A6-208ENST00000538570 PPFIA3O75145 1194 aa11.28□□□□□ -0.6
COL4A6-208ENST00000538570 KRT83P78385 493 aa11.28□□□□□ -0.6
COL4A6-208ENST00000538570 DBN1Q16643 649 aa11.28□□□□□ -0.6
COL4A6-208ENST00000538570 PSMA7O14818 248 aa11.28□□□□□ -0.6
COL4A6-208ENST00000538570 GSTO1P78417 241 aa11.28□□□□□ -0.6
COL4A6-208ENST00000538570 AOPEPQ8N6M6 819 aa11.28□□□□□ -0.6
COL4A6-208ENST00000538570 PCF11O94913 1555 aaKnown RBP11.28□□□□□ -0.6
COL4A6-208ENST00000538570 USP48Q86UV5 1035 aa11.28□□□□□ -0.6
COL4A6-208ENST00000538570 TMTC2Q8N394 836 aa11.28□□□□□ -0.6
COL4A6-208ENST00000538570 NECAB1Q8N987 351 aa11.28□□□□□ -0.6
COL4A6-208ENST00000538570 CAMSAP2Q08AD1 1489 aa11.28□□□□□ -0.6
COL4A6-208ENST00000538570 SYT1P21579 422 aa11.28□□□□□ -0.6
COL4A6-208ENST00000538570 WAPLQ7Z5K2 1190 aa11.28□□□□□ -0.6
COL4A6-208ENST00000538570 BRF1Q92994 677 aa11.28□□□□□ -0.6
COL4A6-208ENST00000538570 CCDC114Q96M63 670 aa11.28□□□□□ -0.6
COL4A6-208ENST00000538570 MAP3K1Q13233 1512 aa11.28□□□□□ -0.6
COL4A6-208ENST00000538570 TUBB4BP68371 445 aa11.27□□□□□ -0.6
COL4A6-208ENST00000538570 HS1BP3Q53T59 392 aa11.27□□□□□ -0.6
COL4A6-208ENST00000538570 RGS22Q8NE09 1264 aa11.27□□□□□ -0.6
COL4A6-208ENST00000538570 SELENOSQ9BQE4 189 aa11.27□□□□□ -0.6
COL4A6-208ENST00000538570 TEX13AQ9BXU3 409 aaPredicted RBP11.27□□□□□ -0.6
COL4A6-208ENST00000538570 ABCC5O15440 1437 aa11.27□□□□□ -0.6
COL4A6-208ENST00000538570 ZBTB16Q05516 673 aa11.27□□□□□ -0.6
COL4A6-208ENST00000538570 GSTA5Q7RTV2 222 aa11.27□□□□□ -0.6
COL4A6-208ENST00000538570 APBB1IPQ7Z5R6 666 aaPredicted RBP11.27□□□□□ -0.6
COL4A6-208ENST00000538570 DNAJC5BQ9UF47 199 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 247.7 ms