RNA–Protein interactions for RNA: ENST00000538046.6

KDM2B-206, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best) BASIC

Gene KDM2B, Length 2,301 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-206ENST00000538046 ERVV-1B6SEH8 477 aa11.34□□□□□ -0.59
KDM2B-206ENST00000538046 DDX58O95786 925 aaKnown RBP11.34□□□□□ -0.59
KDM2B-206ENST00000538046 POLA2Q14181 598 aa11.34□□□□□ -0.59
KDM2B-206ENST00000538046 CLEC4GQ6UXB4 293 aa11.34□□□□□ -0.59
KDM2B-206ENST00000538046 KIF1BPQ96EK5 621 aa11.34□□□□□ -0.59
KDM2B-206ENST00000538046 ZKSCAN5Q9Y2L8 839 aa11.34□□□□□ -0.59
KDM2B-206ENST00000538046 SURF6O75683 361 aaKnown RBP11.34□□□□□ -0.59
KDM2B-206ENST00000538046 CHMLP26374 656 aa11.34□□□□□ -0.59
KDM2B-206ENST00000538046 MCTP1Q6DN14 999 aa11.34□□□□□ -0.59
KDM2B-206ENST00000538046 PPP1R42Q7Z4L9 355 aa11.34□□□□□ -0.59
KDM2B-206ENST00000538046 PLBD2Q8NHP8 589 aa11.34□□□□□ -0.59
KDM2B-206ENST00000538046 LETM1O95202 739 aaPredicted RBP11.33□□□□□ -0.6
KDM2B-206ENST00000538046 CYP2E1P05181 493 aaPredicted RBP11.33□□□□□ -0.6
KDM2B-206ENST00000538046 DDR1Q08345 913 aa11.33□□□□□ -0.6
KDM2B-206ENST00000538046 CAVIN1Q6NZI2 390 aaKnown RBP11.33□□□□□ -0.6
KDM2B-206ENST00000538046 GIGYF2Q6Y7W6 1299 aaKnown RBP11.33□□□□□ -0.6
KDM2B-206ENST00000538046 SGIP1Q9BQI5 828 aa11.33□□□□□ -0.6
KDM2B-206ENST00000538046 LMBRD1Q9NUN5 540 aa11.33□□□□□ -0.6
KDM2B-206ENST00000538046 CCDC39Q9UFE4 941 aa11.33□□□□□ -0.6
KDM2B-206ENST00000538046 NUP98P52948 1817 aa11.33□□□□□ -0.6
KDM2B-206ENST00000538046 PI4KAP2A4QPH2 592 aa11.32□□□□□ -0.6
KDM2B-206ENST00000538046 SRGAP3O43295 1099 aa11.32□□□□□ -0.6
KDM2B-206ENST00000538046 NEK4P51957 841 aa11.32□□□□□ -0.6
KDM2B-206ENST00000538046 BEND3Q5T5X7 828 aa11.32□□□□□ -0.6
KDM2B-206ENST00000538046 PI4KAP1Q8N8J0 262 aa11.32□□□□□ -0.6
KDM2B-206ENST00000538046 ANO2Q9NQ90 1003 aa11.32□□□□□ -0.6
KDM2B-206ENST00000538046 MAP3K2Q9Y2U5 619 aa11.32□□□□□ -0.6
KDM2B-206ENST00000538046 POLRMTO00411 1230 aaKnown RBP11.32□□□□□ -0.6
KDM2B-206ENST00000538046 TM4SF1P30408 202 aa11.32□□□□□ -0.6
KDM2B-206ENST00000538046 TSHZ3Q63HK5 1081 aa11.32□□□□□ -0.6
KDM2B-206ENST00000538046 RHPN1Q8TCX5 695 aa11.32□□□□□ -0.6
KDM2B-206ENST00000538046 CARMIL3Q8ND23 1372 aa11.31□□□□□ -0.6
KDM2B-206ENST00000538046 ATP5J2-PTCD1G3V325 749 aa11.31□□□□□ -0.6
KDM2B-206ENST00000538046 ALDH1L1O75891 902 aa11.31□□□□□ -0.6
KDM2B-206ENST00000538046 SERPINB2P05120 415 aa11.31□□□□□ -0.6
KDM2B-206ENST00000538046 SASS6Q6UVJ0 657 aa11.31□□□□□ -0.6
KDM2B-206ENST00000538046 NBPF5PQ86XG9 351 aaPredicted RBP11.31□□□□□ -0.6
KDM2B-206ENST00000538046 IL17RAQ96F46 866 aa11.31□□□□□ -0.6
KDM2B-206ENST00000538046 RBSNQ9H1K0 784 aa11.31□□□□□ -0.6
KDM2B-206ENST00000538046 HSP90AB3PQ58FF7 597 aa11.31□□□□□ -0.6
KDM2B-206ENST00000538046 KSR2Q6VAB6 950 aa11.31□□□□□ -0.6
KDM2B-206ENST00000538046 CCDC24Q8N4L8 307 aa11.31□□□□□ -0.6
KDM2B-206ENST00000538046 ZNF830Q96NB3 372 aaPredicted RBP11.31□□□□□ -0.6
KDM2B-206ENST00000538046 MYD88Q99836 296 aa11.31□□□□□ -0.6
KDM2B-206ENST00000538046 IL1RAPL2Q9NP60 686 aa11.31□□□□□ -0.6
KDM2B-206ENST00000538046 TCIRG1Q13488 830 aa11.3□□□□□ -0.6
KDM2B-206ENST00000538046 CNTROBQ8N137 903 aa11.3□□□□□ -0.6
KDM2B-206ENST00000538046 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.3□□□□□ -0.6
KDM2B-206ENST00000538046 ARFGEF2Q9Y6D5 1785 aa11.3□□□□□ -0.6
KDM2B-206ENST00000538046 ADCY9O60503 1353 aa11.3□□□□□ -0.6
KDM2B-206ENST00000538046 UBN2Q6ZU65 1347 aa11.3□□□□□ -0.6
KDM2B-206ENST00000538046 VGLL3A8MV65 326 aa11.3□□□□□ -0.6
KDM2B-206ENST00000538046 NBPF7P0C2Y1 421 aaPredicted RBP11.3□□□□□ -0.6
KDM2B-206ENST00000538046 NEXNQ0ZGT2 675 aa11.3□□□□□ -0.6
KDM2B-206ENST00000538046 MTX1Q13505 466 aa11.3□□□□□ -0.6
KDM2B-206ENST00000538046 LRSAM1Q6UWE0 723 aa11.3□□□□□ -0.6
KDM2B-206ENST00000538046 CNBD1Q8NA66 436 aa11.3□□□□□ -0.6
KDM2B-206ENST00000538046 FHDC1Q9C0D6 1143 aaPredicted RBP11.3□□□□□ -0.6
KDM2B-206ENST00000538046 RGL2O15211 777 aa11.29□□□□□ -0.6
KDM2B-206ENST00000538046 NUTM1Q86Y26 1132 aa11.29□□□□□ -0.6
KDM2B-206ENST00000538046 ERC1Q8IUD2 1116 aa11.29□□□□□ -0.6
KDM2B-206ENST00000538046 ZNF34Q8IZ26 560 aa11.29□□□□□ -0.6
KDM2B-206ENST00000538046 INTS4Q96HW7 963 aaKnown RBP11.29□□□□□ -0.6
KDM2B-206ENST00000538046 TMX3Q96JJ7 454 aa11.29□□□□□ -0.6
KDM2B-206ENST00000538046 C9orf78Q9NZ63 289 aaPredicted RBP11.29□□□□□ -0.6
KDM2B-206ENST00000538046 LRP5O75197 1615 aa11.29□□□□□ -0.6
KDM2B-206ENST00000538046 TTC41PQ6P2S7 1318 aa11.29□□□□□ -0.6
KDM2B-206ENST00000538046 MBD3O95983 291 aa11.29□□□□□ -0.6
KDM2B-206ENST00000538046 OS9Q13438 667 aaPredicted RBP11.29□□□□□ -0.6
KDM2B-206ENST00000538046 TAF3Q5VWG9 929 aa11.29□□□□□ -0.6
KDM2B-206ENST00000538046 TPTE2Q6XPS3 522 aa11.29□□□□□ -0.6
KDM2B-206ENST00000538046 METTL22Q9BUU2 404 aaPredicted RBP11.29□□□□□ -0.6
KDM2B-206ENST00000538046 COL24A1Q17RW2 1714 aa11.28□□□□□ -0.6
KDM2B-206ENST00000538046 ST5P78524 1137 aa11.28□□□□□ -0.6
KDM2B-206ENST00000538046 SUSD4Q5VX71 490 aa11.28□□□□□ -0.6
KDM2B-206ENST00000538046 PRR5LQ6MZQ0 368 aa11.28□□□□□ -0.6
KDM2B-206ENST00000538046 PLCD3Q8N3E9 789 aa11.28□□□□□ -0.6
KDM2B-206ENST00000538046 ZGPATQ8N5A5 531 aaKnown RBP11.28□□□□□ -0.6
KDM2B-206ENST00000538046 GPATCH3Q96I76 525 aa11.28□□□□□ -0.6
KDM2B-206ENST00000538046 AFDNP55196 1824 aaKnown RBP11.28□□□□□ -0.6
KDM2B-206ENST00000538046 GLRX3O76003 335 aaKnown RBP11.27□□□□□ -0.6
KDM2B-206ENST00000538046 CUL4AQ13619 759 aa11.27□□□□□ -0.6
KDM2B-206ENST00000538046 CWF19L2Q2TBE0 894 aaKnown RBP11.27□□□□□ -0.6
KDM2B-206ENST00000538046 PARP10Q53GL7 1025 aa11.27□□□□□ -0.6
KDM2B-206ENST00000538046 NLRP10Q86W26 655 aa11.27□□□□□ -0.6
KDM2B-206ENST00000538046 CLASRPQ8N2M8 674 aaKnown RBP11.27□□□□□ -0.6
KDM2B-206ENST00000538046 PI4K2BQ8TCG2 481 aa11.27□□□□□ -0.6
KDM2B-206ENST00000538046 NYXQ9GZU5 481 aa11.27□□□□□ -0.6
KDM2B-206ENST00000538046 TRMT112Q9UI30 125 aaKnown RBP11.27□□□□□ -0.6
KDM2B-206ENST00000538046 ANKRD36CQ5JPF3 1778 aa11.27□□□□□ -0.6
KDM2B-206ENST00000538046 PRPF40AO75400 957 aaKnown RBP11.27□□□□□ -0.61
KDM2B-206ENST00000538046 HSPA4P34932 840 aa11.27□□□□□ -0.61
KDM2B-206ENST00000538046 UTP14AQ9BVJ6 771 aaKnown RBP11.27□□□□□ -0.61
KDM2B-206ENST00000538046 WWC3Q9ULE0 1092 aa11.27□□□□□ -0.61
KDM2B-206ENST00000538046 LINS1Q8NG48 757 aa11.26□□□□□ -0.61
KDM2B-206ENST00000538046 RUFY2Q8WXA3 655 aa11.26□□□□□ -0.61
KDM2B-206ENST00000538046 SYT17Q9BSW7 474 aa11.26□□□□□ -0.61
KDM2B-206ENST00000538046 ISCA1Q9BUE6 129 aa11.26□□□□□ -0.61
KDM2B-206ENST00000538046 ERFEQ4G0M1 354 aa11.26□□□□□ -0.61
KDM2B-206ENST00000538046 NLGN2Q8NFZ4 835 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms