RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 EFCAB8A8MWE9 144 aa12.42□□□□□ -0.42
RTN3-208ENST00000537981 IBSPP21815 317 aaPredicted RBP12.42□□□□□ -0.42
RTN3-208ENST00000537981 INHBEP58166 350 aa12.42□□□□□ -0.42
RTN3-208ENST00000537981 TMEM132EQ6IEE7 984 aa12.42□□□□□ -0.42
RTN3-208ENST00000537981 TCEANC2Q96MN5 208 aa12.42□□□□□ -0.42
RTN3-208ENST00000537981 ESF1Q9H501 851 aaKnown RBP12.42□□□□□ -0.42
RTN3-208ENST00000537981 KCND1Q9NSA2 647 aa12.42□□□□□ -0.42
RTN3-208ENST00000537981 IVLP07476 585 aa12.42□□□□□ -0.42
RTN3-208ENST00000537981 GNAI1P63096 354 aa12.42□□□□□ -0.42
RTN3-208ENST00000537981 APOBRQ0VD83 1088 aa12.42□□□□□ -0.42
RTN3-208ENST00000537981 MAP9Q49MG5 647 aa12.42□□□□□ -0.42
RTN3-208ENST00000537981 TTC19Q6DKK2 380 aaPredicted RBP12.42□□□□□ -0.42
RTN3-208ENST00000537981 DDX11Q96FC9 970 aa12.42□□□□□ -0.42
RTN3-208ENST00000537981 GOLGA6L4A6NEF3 574 aa12.41□□□□□ -0.42
RTN3-208ENST00000537981 HNRNPH1P31943 449 aaKnown RBP12.41□□□□□ -0.42
RTN3-208ENST00000537981 LARP1BQ659C4 914 aaKnown RBP12.41□□□□□ -0.42
RTN3-208ENST00000537981 DNAAF4Q8WXU2 420 aa12.41□□□□□ -0.42
RTN3-208ENST00000537981 XPO4Q9C0E2 1151 aaKnown RBP12.41□□□□□ -0.42
RTN3-208ENST00000537981 KIF2AO00139 706 aaPredicted RBP12.41□□□□□ -0.42
RTN3-208ENST00000537981 MAP2K7O14733 419 aa12.41□□□□□ -0.42
RTN3-208ENST00000537981 SMC2O95347 1197 aa12.41□□□□□ -0.42
RTN3-208ENST00000537981 CPP00450 1065 aa12.41□□□□□ -0.42
RTN3-208ENST00000537981 RPAINQ86UA6 219 aa12.41□□□□□ -0.42
RTN3-208ENST00000537981 CEP89Q96ST8 783 aa12.41□□□□□ -0.42
RTN3-208ENST00000537981 RAI14Q9P0K7 980 aa12.41□□□□□ -0.42
RTN3-208ENST00000537981 RIPOR2Q9Y4F9 1068 aa12.41□□□□□ -0.42
RTN3-208ENST00000537981 RPAP2Q8IXW5 612 aaPredicted RBP12.4□□□□□ -0.42
RTN3-208ENST00000537981 CNNM3Q8NE01 707 aa12.4□□□□□ -0.42
RTN3-208ENST00000537981 API5Q9BZZ5 524 aaKnown RBP12.4□□□□□ -0.42
RTN3-208ENST00000537981 BECN2A8MW95 431 aa12.4□□□□□ -0.42
RTN3-208ENST00000537981 F6X3S4 739 aa12.4□□□□□ -0.42
RTN3-208ENST00000537981 SEMA3FQ13275 785 aa12.4□□□□□ -0.42
RTN3-208ENST00000537981 BIRC2Q13490 618 aa12.4□□□□□ -0.42
RTN3-208ENST00000537981 LRRFIP1Q32MZ4 808 aaKnown RBP12.4□□□□□ -0.42
RTN3-208ENST00000537981 JPH2Q9BR39 696 aaPredicted RBP12.4□□□□□ -0.42
RTN3-208ENST00000537981 FAM117AQ9C073 453 aa12.4□□□□□ -0.42
RTN3-208ENST00000537981 GOLPH3LQ9H4A5 285 aa12.4□□□□□ -0.42
RTN3-208ENST00000537981 CABP2Q9NPB3 220 aa12.4□□□□□ -0.42
RTN3-208ENST00000537981 DDX19AQ9NUU7 478 aaKnown RBP12.4□□□□□ -0.42
RTN3-208ENST00000537981 QRICH2Q9H0J4 1663 aa12.39□□□□□ -0.43
RTN3-208ENST00000537981 ATP8B1O43520 1251 aa12.39□□□□□ -0.43
RTN3-208ENST00000537981 KIF1CO43896 1103 aaKnown RBP12.39□□□□□ -0.43
RTN3-208ENST00000537981 PDE6BP35913 854 aa12.39□□□□□ -0.43
RTN3-208ENST00000537981 SAFB2Q14151 953 aaKnown RBP eCLIP12.39□□□□□ -0.431e-7■■■■□ 23.5
RTN3-208ENST00000537981 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.39□□□□□ -0.43
RTN3-208ENST00000537981 RSRC2Q7L4I2 434 aaKnown RBP12.39□□□□□ -0.43
RTN3-208ENST00000537981 PRPF38AQ8NAV1 312 aaKnown RBP12.39□□□□□ -0.43
RTN3-208ENST00000537981 IL17RAQ96F46 866 aa12.39□□□□□ -0.43
RTN3-208ENST00000537981 PNKPQ96T60 521 aa12.39□□□□□ -0.43
RTN3-208ENST00000537981 IL1RAPL2Q9NP60 686 aa12.39□□□□□ -0.43
RTN3-208ENST00000537981 IFNKQ9P0W0 207 aa12.39□□□□□ -0.43
RTN3-208ENST00000537981 SETD1BQ9UPS6 1966 aaKnown RBP12.39□□□□□ -0.43
RTN3-208ENST00000537981 PAX7P23759 505 aa12.39□□□□□ -0.43
RTN3-208ENST00000537981 LRCH2Q5VUJ6 765 aa12.39□□□□□ -0.43
RTN3-208ENST00000537981 LARP1Q6PKG0 1096 aaKnown RBP12.39□□□□□ -0.43
RTN3-208ENST00000537981 RNF25Q96BH1 459 aaPredicted RBP12.39□□□□□ -0.43
RTN3-208ENST00000537981 OSBPL5Q9H0X9 879 aaPredicted RBP12.39□□□□□ -0.43
RTN3-208ENST00000537981 EHD4Q9H223 541 aa12.39□□□□□ -0.43
RTN3-208ENST00000537981 TPCN1Q9ULQ1 816 aa12.39□□□□□ -0.43
RTN3-208ENST00000537981 PHLPP2Q6ZVD8 1323 aa12.39□□□□□ -0.43
RTN3-208ENST00000537981 PNMA6EA0A0J9YXQ4 647 aa12.38□□□□□ -0.43
RTN3-208ENST00000537981 EXOC5O00471 708 aa12.38□□□□□ -0.43
RTN3-208ENST00000537981 RPS6KA5O75582 802 aa12.38□□□□□ -0.43
RTN3-208ENST00000537981 ZNF853P0CG23 659 aa12.38□□□□□ -0.43
RTN3-208ENST00000537981 PPP2R3AQ06190 1150 aa12.38□□□□□ -0.43
RTN3-208ENST00000537981 VPS53Q5VIR6 699 aa12.38□□□□□ -0.43
RTN3-208ENST00000537981 NAIF1Q69YI7 327 aaPredicted RBP12.38□□□□□ -0.43
RTN3-208ENST00000537981 NUTM1Q86Y26 1132 aa12.38□□□□□ -0.43
RTN3-208ENST00000537981 FMNL2Q96PY5 1086 aa12.38□□□□□ -0.43
RTN3-208ENST00000537981 LSG1Q9H089 658 aaKnown RBP12.38□□□□□ -0.43
RTN3-208ENST00000537981 USP32Q8NFA0 1604 aa12.38□□□□□ -0.43
RTN3-208ENST00000537981 PREX1Q8TCU6 1659 aa12.38□□□□□ -0.43
RTN3-208ENST00000537981 PSDA5PKW4 1024 aaPredicted RBP12.38□□□□□ -0.43
RTN3-208ENST00000537981 VWA3AA6NCI4 1184 aa12.38□□□□□ -0.43
RTN3-208ENST00000537981 A6NJR5 290 aa12.38□□□□□ -0.43
RTN3-208ENST00000537981 ATP2B2Q01814 1243 aa12.38□□□□□ -0.43
RTN3-208ENST00000537981 EFCAB13Q8IY85 973 aa12.38□□□□□ -0.43
RTN3-208ENST00000537981 GPR161Q8N6U8 529 aaKnown RBP12.38□□□□□ -0.43
RTN3-208ENST00000537981 FAXDC2Q96IV6 333 aa12.38□□□□□ -0.43
RTN3-208ENST00000537981 IRX2Q9BZI1 471 aaPredicted RBP12.38□□□□□ -0.43
RTN3-208ENST00000537981 KIAA0232Q92628 1395 aa12.38□□□□□ -0.43
RTN3-208ENST00000537981 SEMA3EO15041 775 aa12.37□□□□□ -0.43
RTN3-208ENST00000537981 MAFGO15525 162 aa12.37□□□□□ -0.43
RTN3-208ENST00000537981 SFPQP23246 707 aaKnown RBP eCLIP12.37□□□□□ -0.43
RTN3-208ENST00000537981 BEND6Q5SZJ8 279 aaPredicted RBP12.37□□□□□ -0.43
RTN3-208ENST00000537981 DHX58Q96C10 678 aa12.37□□□□□ -0.43
RTN3-208ENST00000537981 CALR3Q96L12 384 aaKnown RBP12.37□□□□□ -0.43
RTN3-208ENST00000537981 UTP14AQ9BVJ6 771 aaKnown RBP12.37□□□□□ -0.43
RTN3-208ENST00000537981 NPHP3Q7Z494 1330 aa12.37□□□□□ -0.43
RTN3-208ENST00000537981 SRGAP3O43295 1099 aa12.37□□□□□ -0.43
RTN3-208ENST00000537981 DIAPH1O60610 1272 aaKnown RBP12.37□□□□□ -0.43
RTN3-208ENST00000537981 FOSBP53539 338 aa12.37□□□□□ -0.43
RTN3-208ENST00000537981 PTH1RQ03431 593 aa12.37□□□□□ -0.43
RTN3-208ENST00000537981 SLC4A10Q6U841 1118 aa12.37□□□□□ -0.43
RTN3-208ENST00000537981 JAKMIP1Q96N16 626 aaKnown RBP12.37□□□□□ -0.43
RTN3-208ENST00000537981 FAM204AQ9H8W3 233 aa12.37□□□□□ -0.43
RTN3-208ENST00000537981 ANKZF1Q9H8Y5 726 aa12.37□□□□□ -0.43
RTN3-208ENST00000537981 AMOTL2Q9Y2J4 779 aa12.37□□□□□ -0.43
RTN3-208ENST00000537981 DLG5Q8TDM6 1919 aa12.36□□□□□ -0.43
RTN3-208ENST00000537981 ERLIN2O94905 339 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms