RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 KAZALD1Q96I82 304 aa14.3□□□□□ -0.12
CPSF7-218ENST00000537641 LLPHQ9BRT6 129 aaKnown RBP14.3□□□□□ -0.12
CPSF7-218ENST00000537641 CCDC8Q9H0W5 538 aaPredicted RBP14.3□□□□□ -0.12
CPSF7-218ENST00000537641 BICC1Q9H694 974 aaKnown RBP14.3□□□□□ -0.12
CPSF7-218ENST00000537641 OGFRQ9NZT2 677 aa14.3□□□□□ -0.12
CPSF7-218ENST00000537641 U3KPZ7 1027 aaPredicted RBP14.3□□□□□ -0.12
CPSF7-218ENST00000537641 NR1I2O75469 434 aa14.29□□□□□ -0.12
CPSF7-218ENST00000537641 TAF5LO75529 589 aa14.29□□□□□ -0.12
CPSF7-218ENST00000537641 LRMPQ12912 555 aa14.29□□□□□ -0.12
CPSF7-218ENST00000537641 PDIA6Q15084 440 aa14.29□□□□□ -0.12
CPSF7-218ENST00000537641 STX1AQ16623 288 aa14.29□□□□□ -0.12
CPSF7-218ENST00000537641 CWF19L2Q2TBE0 894 aaKnown RBP14.29□□□□□ -0.12
CPSF7-218ENST00000537641 ATL3Q6DD88 541 aa14.29□□□□□ -0.12
CPSF7-218ENST00000537641 BRF1Q92994 677 aa14.29□□□□□ -0.12
CPSF7-218ENST00000537641 DCAF5Q96JK2 942 aa14.29□□□□□ -0.12
CPSF7-218ENST00000537641 DNAJC25Q9H1X3 360 aa14.29□□□□□ -0.12
CPSF7-218ENST00000537641 BOLA2Q9H3K6 86 aa14.29□□□□□ -0.12
CPSF7-218ENST00000537641 TFIP11Q9UBB9 837 aaKnown RBP14.29□□□□□ -0.12
CPSF7-218ENST00000537641 GOLGA6L19H0YKK7 550 aa14.29□□□□□ -0.12
CPSF7-218ENST00000537641 DTNBO60941 627 aa14.29□□□□□ -0.12
CPSF7-218ENST00000537641 IQCB1Q15051 598 aa14.29□□□□□ -0.12
CPSF7-218ENST00000537641 CCDC112Q8NEF3 446 aa14.29□□□□□ -0.12
CPSF7-218ENST00000537641 SMARCC2Q8TAQ2 1214 aa14.29□□□□□ -0.12
CPSF7-218ENST00000537641 CABLES1Q8TDN4 633 aa14.29□□□□□ -0.12
CPSF7-218ENST00000537641 C16orf45Q96MC5 204 aaPredicted RBP14.29□□□□□ -0.12
CPSF7-218ENST00000537641 NEK1Q96PY6 1258 aa14.29□□□□□ -0.12
CPSF7-218ENST00000537641 DNAJC5Q9H3Z4 198 aa14.29□□□□□ -0.12
CPSF7-218ENST00000537641 TLR7Q9NYK1 1049 aaKnown RBP14.29□□□□□ -0.12
CPSF7-218ENST00000537641 COL15A1P39059 1388 aa14.28□□□□□ -0.12
CPSF7-218ENST00000537641 AFDNP55196 1824 aaKnown RBP14.28□□□□□ -0.12
CPSF7-218ENST00000537641 H3BQV1 296 aa14.28□□□□□ -0.12
CPSF7-218ENST00000537641 ATP5JP18859 108 aa14.28□□□□□ -0.12
CPSF7-218ENST00000537641 U2AF2P26368 475 aaKnown RBP eCLIP14.28□□□□□ -0.121e-6■■■□□ 18.8
CPSF7-218ENST00000537641 RBM6P78332 1123 aaKnown RBP14.28□□□□□ -0.12
CPSF7-218ENST00000537641 IFFO2Q5TF58 517 aa14.28□□□□□ -0.12
CPSF7-218ENST00000537641 NAA16Q6N069 864 aaPredicted RBP14.28□□□□□ -0.12
CPSF7-218ENST00000537641 ZNF589Q86UQ0 364 aaPredicted RBP14.28□□□□□ -0.12
CPSF7-218ENST00000537641 TCEANC2Q96MN5 208 aa14.28□□□□□ -0.12
CPSF7-218ENST00000537641 NRBP1Q9UHY1 535 aa14.28□□□□□ -0.12
CPSF7-218ENST00000537641 SLC39A6Q13433 755 aa14.27□□□□□ -0.12
CPSF7-218ENST00000537641 COL9A3Q14050 684 aaPredicted RBP14.27□□□□□ -0.12
CPSF7-218ENST00000537641 CHRNA2Q15822 529 aa14.27□□□□□ -0.12
CPSF7-218ENST00000537641 TPD52L1Q16890 204 aaPredicted RBP14.27□□□□□ -0.12
CPSF7-218ENST00000537641 NFATC2IPQ8NCF5 419 aa14.27□□□□□ -0.12
CPSF7-218ENST00000537641 CACTINQ8WUQ7 758 aaKnown RBP14.27□□□□□ -0.12
CPSF7-218ENST00000537641 KCND1Q9NSA2 647 aa14.27□□□□□ -0.12
CPSF7-218ENST00000537641 STRCQ7RTU9 1775 aa14.27□□□□□ -0.12
CPSF7-218ENST00000537641 ARFGEF2Q9Y6D5 1785 aa14.27□□□□□ -0.12
CPSF7-218ENST00000537641 ABCA3Q99758 1704 aa14.27□□□□□ -0.13
CPSF7-218ENST00000537641 STK3Q13188 491 aa14.27□□□□□ -0.13
CPSF7-218ENST00000537641 RCOR1Q9UKL0 485 aa14.27□□□□□ -0.13
CPSF7-218ENST00000537641 TAF6LQ9Y6J9 622 aa14.27□□□□□ -0.13
CPSF7-218ENST00000537641 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.27□□□□□ -0.13
CPSF7-218ENST00000537641 GLI3P10071 1580 aa14.26□□□□□ -0.13
CPSF7-218ENST00000537641 CYP27B1O15528 508 aa14.26□□□□□ -0.13
CPSF7-218ENST00000537641 JAK2O60674 1132 aa14.26□□□□□ -0.13
CPSF7-218ENST00000537641 PFKFB2O60825 505 aa14.26□□□□□ -0.13
CPSF7-218ENST00000537641 GABPB1Q06547 395 aaPredicted RBP14.26□□□□□ -0.13
CPSF7-218ENST00000537641 CCDC144BQ3MJ40 725 aa14.26□□□□□ -0.13
CPSF7-218ENST00000537641 CEP135Q66GS9 1140 aa14.26□□□□□ -0.13
CPSF7-218ENST00000537641 Q6ZUG5 572 aa14.26□□□□□ -0.13
CPSF7-218ENST00000537641 TICAM2Q86XR7 235 aa14.26□□□□□ -0.13
CPSF7-218ENST00000537641 LRRC8AQ8IWT6 810 aa14.26□□□□□ -0.13
CPSF7-218ENST00000537641 CCDC144CPQ8IYA2 1237 aa14.26□□□□□ -0.13
CPSF7-218ENST00000537641 COPRSQ9NQ92 184 aa14.26□□□□□ -0.13
CPSF7-218ENST00000537641 CTNNA3Q9UI47 895 aa14.26□□□□□ -0.13
CPSF7-218ENST00000537641 ZNF609O15014 1411 aa14.25□□□□□ -0.13
CPSF7-218ENST00000537641 KIF2AO00139 706 aaPredicted RBP14.25□□□□□ -0.13
CPSF7-218ENST00000537641 HMGB1P09429 215 aaKnown RBP14.25□□□□□ -0.13
CPSF7-218ENST00000537641 SNRPA1P09661 255 aaKnown RBP14.25□□□□□ -0.13
CPSF7-218ENST00000537641 HSP90B1P14625 803 aaKnown RBP14.25□□□□□ -0.13
CPSF7-218ENST00000537641 HSPA2P54652 639 aa14.25□□□□□ -0.13
CPSF7-218ENST00000537641 NEXNQ0ZGT2 675 aa14.25□□□□□ -0.13
CPSF7-218ENST00000537641 AIMP1Q12904 312 aaKnown RBP14.25□□□□□ -0.13
CPSF7-218ENST00000537641 BRINP3Q76B58 766 aa14.25□□□□□ -0.13
CPSF7-218ENST00000537641 RIC3Q7Z5B4 369 aa14.25□□□□□ -0.13
CPSF7-218ENST00000537641 TTC5Q8N0Z6 440 aa14.25□□□□□ -0.13
CPSF7-218ENST00000537641 CHMP4CQ96CF2 233 aa14.25□□□□□ -0.13
CPSF7-218ENST00000537641 ZNF496Q96IT1 587 aaPredicted RBP14.25□□□□□ -0.13
CPSF7-218ENST00000537641 ZNF396Q96N95 335 aaPredicted RBP14.25□□□□□ -0.13
CPSF7-218ENST00000537641 ANO10Q9NW15 660 aa14.25□□□□□ -0.13
CPSF7-218ENST00000537641 ZHX1Q9UKY1 873 aaPredicted RBP14.25□□□□□ -0.13
CPSF7-218ENST00000537641 UBR2Q8IWV8 1755 aa14.25□□□□□ -0.13
CPSF7-218ENST00000537641 SH3TC1Q8TE82 1336 aa14.25□□□□□ -0.13
CPSF7-218ENST00000537641 CCDC73Q6ZRK6 1079 aa14.24□□□□□ -0.13
CPSF7-218ENST00000537641 FMNL2Q96PY5 1086 aa14.24□□□□□ -0.13
CPSF7-218ENST00000537641 SPEF2Q9C093 1822 aa14.24□□□□□ -0.13
CPSF7-218ENST00000537641 SPDYE4A6NLX3 237 aa14.24□□□□□ -0.13
CPSF7-218ENST00000537641 NEURL1BA8MQ27 555 aa14.24□□□□□ -0.13
CPSF7-218ENST00000537641 IGKV5-2P06315 115 aa14.24□□□□□ -0.13
CPSF7-218ENST00000537641 ADD1P35611 737 aaKnown RBP14.24□□□□□ -0.13
CPSF7-218ENST00000537641 C11orf57Q6ZUT1 292 aaPredicted RBP14.24□□□□□ -0.13
CPSF7-218ENST00000537641 NYAP1Q6ZVC0 841 aa14.24□□□□□ -0.13
CPSF7-218ENST00000537641 CCAR1Q8IX12 1150 aaKnown RBP14.24□□□□□ -0.13
CPSF7-218ENST00000537641 NSUN7Q8NE18 718 aaKnown RBP14.24□□□□□ -0.13
CPSF7-218ENST00000537641 XAGE3Q8WTP9 111 aa14.24□□□□□ -0.13
CPSF7-218ENST00000537641 DDX41Q9UJV9 622 aaKnown RBP14.24□□□□□ -0.13
CPSF7-218ENST00000537641 PALLDQ8WX93 1383 aa14.24□□□□□ -0.13
CPSF7-218ENST00000537641 PAPPAQ13219 1627 aa14.23□□□□□ -0.13
CPSF7-218ENST00000537641 MYL6BP14649 208 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms