RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 CNOT7Q9UIV1 285 aaKnown RBP12.62□□□□□ -0.39
CCDC170-202ENST00000537358 MYH3P11055 1940 aa12.62□□□□□ -0.39
CCDC170-202ENST00000537358 WDR33Q9C0J8 1336 aaKnown RBP12.62□□□□□ -0.39
CCDC170-202ENST00000537358 CACNA1FO60840 1977 aa12.61□□□□□ -0.39
CCDC170-202ENST00000537358 DUOX1Q9NRD9 1551 aa12.61□□□□□ -0.39
CCDC170-202ENST00000537358 RPS12P25398 132 aaKnown RBP12.61□□□□□ -0.39
CCDC170-202ENST00000537358 GPSM2P81274 684 aa12.61□□□□□ -0.39
CCDC170-202ENST00000537358 DPF2Q92785 391 aa12.61□□□□□ -0.39
CCDC170-202ENST00000537358 DBNDD1Q9H9R9 158 aa12.61□□□□□ -0.39
CCDC170-202ENST00000537358 MRS2Q9HD23 443 aa12.61□□□□□ -0.39
CCDC170-202ENST00000537358 GGA1Q9UJY5 639 aa12.61□□□□□ -0.39
CCDC170-202ENST00000537358 MAP3K2Q9Y2U5 619 aa12.61□□□□□ -0.39
CCDC170-202ENST00000537358 YDJCA8MPS7 323 aa12.6□□□□□ -0.39
CCDC170-202ENST00000537358 FOXN1O15353 648 aa12.6□□□□□ -0.39
CCDC170-202ENST00000537358 ECE2O60344 883 aa12.6□□□□□ -0.39
CCDC170-202ENST00000537358 UFL1O94874 794 aa12.6□□□□□ -0.39
CCDC170-202ENST00000537358 TWISTNBQ3B726 338 aaPredicted RBP12.6□□□□□ -0.39
CCDC170-202ENST00000537358 KSR2Q6VAB6 950 aa12.6□□□□□ -0.39
CCDC170-202ENST00000537358 ANKRD18AQ8IVF6 992 aa12.6□□□□□ -0.39
CCDC170-202ENST00000537358 WWC1Q8IX03 1113 aa12.6□□□□□ -0.39
CCDC170-202ENST00000537358 MICALL2Q8IY33 904 aa12.6□□□□□ -0.39
CCDC170-202ENST00000537358 TSR2Q969E8 191 aaKnown RBP12.6□□□□□ -0.39
CCDC170-202ENST00000537358 CDC5LQ99459 802 aaKnown RBP12.6□□□□□ -0.39
CCDC170-202ENST00000537358 PRDM10Q9NQV6 1147 aa12.6□□□□□ -0.39
CCDC170-202ENST00000537358 POLLQ9UGP5 575 aa12.6□□□□□ -0.39
CCDC170-202ENST00000537358 IL16Q14005 1332 aa12.6□□□□□ -0.39
CCDC170-202ENST00000537358 PI4KAP2A4QPH2 592 aa12.59□□□□□ -0.39
CCDC170-202ENST00000537358 TRAF5O00463 557 aa12.59□□□□□ -0.39
CCDC170-202ENST00000537358 PSMD14O00487 310 aa12.59□□□□□ -0.39
CCDC170-202ENST00000537358 CELF2O95319 508 aaKnown RBP12.59□□□□□ -0.39
CCDC170-202ENST00000537358 GRM1Q13255 1194 aa12.59□□□□□ -0.39
CCDC170-202ENST00000537358 CDC37L1Q7L3B6 337 aa12.59□□□□□ -0.39
CCDC170-202ENST00000537358 TSPYL6Q8N831 410 aa12.59□□□□□ -0.39
CCDC170-202ENST00000537358 PI4KAP1Q8N8J0 262 aa12.59□□□□□ -0.39
CCDC170-202ENST00000537358 TBC1D16Q8TBP0 767 aa12.59□□□□□ -0.39
CCDC170-202ENST00000537358 CAPNS2Q96L46 248 aa12.59□□□□□ -0.39
CCDC170-202ENST00000537358 SEC31BQ9NQW1 1179 aa12.59□□□□□ -0.39
CCDC170-202ENST00000537358 WBP1LQ9NX94 342 aa12.59□□□□□ -0.39
CCDC170-202ENST00000537358 PODXL2Q9NZ53 605 aa12.59□□□□□ -0.39
CCDC170-202ENST00000537358 DOK7Q18PE1 504 aa12.58□□□□□ -0.4
CCDC170-202ENST00000537358 GPR101Q96P66 508 aaPredicted RBP12.58□□□□□ -0.4
CCDC170-202ENST00000537358 CCDC85AQ96PX6 553 aaPredicted RBP12.58□□□□□ -0.4
CCDC170-202ENST00000537358 GLIS2Q9BZE0 524 aaPredicted RBP12.58□□□□□ -0.4
CCDC170-202ENST00000537358 ZNF408Q9H9D4 720 aa12.58□□□□□ -0.4
CCDC170-202ENST00000537358 PGAP2Q9UHJ9 254 aa12.58□□□□□ -0.4
CCDC170-202ENST00000537358 TLL2Q9Y6L7 1015 aa12.58□□□□□ -0.4
CCDC170-202ENST00000537358 XDHP47989 1333 aa12.58□□□□□ -0.4
CCDC170-202ENST00000537358 CTSWP56202 376 aa12.57□□□□□ -0.4
CCDC170-202ENST00000537358 CST9Q5W186 159 aa12.57□□□□□ -0.4
CCDC170-202ENST00000537358 TRPM4Q8TD43 1214 aa12.57□□□□□ -0.4
CCDC170-202ENST00000537358 JARID2Q92833 1246 aaPredicted RBP12.57□□□□□ -0.4
CCDC170-202ENST00000537358 DCPSQ96C86 337 aaKnown RBP12.57□□□□□ -0.4
CCDC170-202ENST00000537358 MYH16Q9H6N6 1097 aa12.57□□□□□ -0.4
CCDC170-202ENST00000537358 SPEF2Q9C093 1822 aa12.56□□□□□ -0.4
CCDC170-202ENST00000537358 ZNF316A6NFI3 1004 aaPredicted RBP12.56□□□□□ -0.4
CCDC170-202ENST00000537358 ATP2B4P23634 1241 aa12.56□□□□□ -0.4
CCDC170-202ENST00000537358 FMR1Q06787 632 aaKnown RBP eCLIP12.56□□□□□ -0.4
CCDC170-202ENST00000537358 CCDC184Q52MB2 194 aa12.56□□□□□ -0.4
CCDC170-202ENST00000537358 CYP4F22Q6NT55 531 aa12.56□□□□□ -0.4
CCDC170-202ENST00000537358 HHIPL1Q96JK4 782 aa12.56□□□□□ -0.4
CCDC170-202ENST00000537358 SPDYE2BA6NHP3 402 aa12.55□□□□□ -0.4
CCDC170-202ENST00000537358 IGKV5-2P06315 115 aa12.55□□□□□ -0.4
CCDC170-202ENST00000537358 SPDYE6P0CI01 402 aa12.55□□□□□ -0.4
CCDC170-202ENST00000537358 MAP2K2P36507 400 aa12.55□□□□□ -0.4
CCDC170-202ENST00000537358 IGHMBP2P38935 993 aaKnown RBP12.55□□□□□ -0.4
CCDC170-202ENST00000537358 LBX1P52954 281 aa12.55□□□□□ -0.4
CCDC170-202ENST00000537358 HIRAP54198 1017 aaPredicted RBP12.55□□□□□ -0.4
CCDC170-202ENST00000537358 FKBP5Q13451 457 aaPredicted RBP12.55□□□□□ -0.4
CCDC170-202ENST00000537358 SPDYE2Q495Y8 402 aa12.55□□□□□ -0.4
CCDC170-202ENST00000537358 TBC1D10BQ4KMP7 808 aaPredicted RBP12.55□□□□□ -0.4
CCDC170-202ENST00000537358 RBM26Q5T8P6 1007 aaKnown RBP12.55□□□□□ -0.4
CCDC170-202ENST00000537358 SAMD7Q7Z3H4 446 aa12.55□□□□□ -0.4
CCDC170-202ENST00000537358 KRT26Q7Z3Y9 468 aa12.55□□□□□ -0.4
CCDC170-202ENST00000537358 SAPCD2Q86UD0 394 aa12.55□□□□□ -0.4
CCDC170-202ENST00000537358 USP48Q86UV5 1035 aa12.55□□□□□ -0.4
CCDC170-202ENST00000537358 WDR63Q8IWG1 891 aa12.55□□□□□ -0.4
CCDC170-202ENST00000537358 POLR2AP24928 1970 aaKnown RBP12.55□□□□□ -0.4
CCDC170-202ENST00000537358 PSME4Q14997 1843 aa12.55□□□□□ -0.4
CCDC170-202ENST00000537358 THSD7BQ9C0I4 1608 aa12.55□□□□□ -0.4
CCDC170-202ENST00000537358 COL4A1P02462 1669 aa12.54□□□□□ -0.4
CCDC170-202ENST00000537358 NEURL1BA8MQ27 555 aa12.54□□□□□ -0.4
CCDC170-202ENST00000537358 VIL1P09327 827 aaKnown RBP12.54□□□□□ -0.4
CCDC170-202ENST00000537358 FLIIQ13045 1269 aa12.54□□□□□ -0.4
CCDC170-202ENST00000537358 CWF19L2Q2TBE0 894 aaKnown RBP12.54□□□□□ -0.4
CCDC170-202ENST00000537358 KIF4BQ2VIQ3 1234 aa12.54□□□□□ -0.4
CCDC170-202ENST00000537358 UBE3BQ7Z3V4 1068 aa12.54□□□□□ -0.4
CCDC170-202ENST00000537358 SULF1Q8IWU6 871 aa12.54□□□□□ -0.4
CCDC170-202ENST00000537358 AGBL3Q8NEM8 1001 aa12.54□□□□□ -0.4
CCDC170-202ENST00000537358 TTLL11Q8NHH1 800 aa12.54□□□□□ -0.4
CCDC170-202ENST00000537358 BSDC1Q9NW68 430 aaPredicted RBP12.54□□□□□ -0.4
CCDC170-202ENST00000537358 SALL2Q9Y467 1007 aaPredicted RBP12.54□□□□□ -0.4
CCDC170-202ENST00000537358 FANCIQ9NVI1 1328 aa12.54□□□□□ -0.4
CCDC170-202ENST00000537358 SCN9AQ15858 1988 aa12.54□□□□□ -0.4
CCDC170-202ENST00000537358 RTL9Q8NET4 1388 aa12.54□□□□□ -0.4
CCDC170-202ENST00000537358 SHTN1A0MZ66 631 aa12.53□□□□□ -0.4
CCDC170-202ENST00000537358 SPDYE4A6NLX3 237 aa12.53□□□□□ -0.4
CCDC170-202ENST00000537358 CA12O43570 354 aa12.53□□□□□ -0.4
CCDC170-202ENST00000537358 RSBN1LQ6PCB5 846 aaPredicted RBP12.53□□□□□ -0.4
CCDC170-202ENST00000537358 PODNQ7Z5L7 613 aa12.53□□□□□ -0.4
CCDC170-202ENST00000537358 C2orf69Q8N8R5 385 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms