RNA–Protein interactions for RNA: ENST00000537304.5

LMO3-215, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 1,685 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-215ENST00000537304 USP16Q9Y5T5 823 aa12.61□□□□□ -0.39
LMO3-215ENST00000537304 DIP2AQ14689 1571 aa12.61□□□□□ -0.39
LMO3-215ENST00000537304 VGLL3A8MV65 326 aa12.61□□□□□ -0.39
LMO3-215ENST00000537304 ZBTB22O15209 634 aa12.61□□□□□ -0.39
LMO3-215ENST00000537304 IRX3P78415 501 aaPredicted RBP12.61□□□□□ -0.39
LMO3-215ENST00000537304 PSME1Q06323 249 aa12.61□□□□□ -0.39
LMO3-215ENST00000537304 C11orf57Q6ZUT1 292 aaPredicted RBP12.61□□□□□ -0.39
LMO3-215ENST00000537304 IQUBQ8NA54 791 aa12.61□□□□□ -0.39
LMO3-215ENST00000537304 GTF3C6Q969F1 213 aa12.61□□□□□ -0.39
LMO3-215ENST00000537304 MPHOSPH8Q99549 860 aa12.61□□□□□ -0.39
LMO3-215ENST00000537304 UBXN6Q9BZV1 441 aa12.61□□□□□ -0.39
LMO3-215ENST00000537304 ROBO2Q9HCK4 1378 aa12.6□□□□□ -0.39
LMO3-215ENST00000537304 JCADQ9P266 1359 aa12.6□□□□□ -0.39
LMO3-215ENST00000537304 HMGB1P09429 215 aaKnown RBP12.6□□□□□ -0.39
LMO3-215ENST00000537304 E4F1Q66K89 784 aaPredicted RBP12.6□□□□□ -0.39
LMO3-215ENST00000537304 SYT10Q6XYQ8 523 aa12.6□□□□□ -0.39
LMO3-215ENST00000537304 MSL3Q8N5Y2 521 aaKnown RBP12.6□□□□□ -0.39
LMO3-215ENST00000537304 SBNO1A3KN83 1393 aa12.59□□□□□ -0.39
LMO3-215ENST00000537304 FLT4P35916 1363 aa12.59□□□□□ -0.39
LMO3-215ENST00000537304 RFX7Q2KHR2 1363 aa12.59□□□□□ -0.39
LMO3-215ENST00000537304 GNAT3A8MTJ3 354 aa12.59□□□□□ -0.39
LMO3-215ENST00000537304 POTEB2H3BUK9 544 aa12.59□□□□□ -0.39
LMO3-215ENST00000537304 MTHFSDQ2M296 383 aaKnown RBP12.59□□□□□ -0.39
LMO3-215ENST00000537304 AOPEPQ8N6M6 819 aa12.59□□□□□ -0.39
LMO3-215ENST00000537304 ARFGAP3Q9NP61 516 aa12.59□□□□□ -0.39
LMO3-215ENST00000537304 ZRANB1Q9UGI0 708 aa12.59□□□□□ -0.39
LMO3-215ENST00000537304 MYH15Q9Y2K3 1946 aa12.59□□□□□ -0.39
LMO3-215ENST00000537304 PTPRUQ92729 1446 aa12.59□□□□□ -0.39
LMO3-215ENST00000537304 A0A1W2PQ27 194 aa12.58□□□□□ -0.4
LMO3-215ENST00000537304 A0A1W2PQ64 194 aa12.58□□□□□ -0.4
LMO3-215ENST00000537304 A0A1W2PQD8 194 aa12.58□□□□□ -0.4
LMO3-215ENST00000537304 TADA3O75528 432 aa12.58□□□□□ -0.4
LMO3-215ENST00000537304 TAF7Q15545 349 aaPredicted RBP12.58□□□□□ -0.4
LMO3-215ENST00000537304 ZSCAN26Q16670 478 aa12.58□□□□□ -0.4
LMO3-215ENST00000537304 BRF1Q92994 677 aa12.58□□□□□ -0.4
LMO3-215ENST00000537304 SLC26A8Q96RN1 970 aa12.58□□□□□ -0.4
LMO3-215ENST00000537304 BCL11BQ9C0K0 894 aaPredicted RBP12.58□□□□□ -0.4
LMO3-215ENST00000537304 ZNF142P52746 1687 aaPredicted RBP12.58□□□□□ -0.4
LMO3-215ENST00000537304 IKBKBO14920 756 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 SMC2O95347 1197 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 TOB2Q14106 344 aaPredicted RBP12.57□□□□□ -0.4
LMO3-215ENST00000537304 ARID5BQ14865 1188 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 HDGFL1Q5TGJ6 251 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 FAM173BQ6P4H8 233 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 LEKR1Q6ZMV7 388 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 KRBA2Q6ZNG9 492 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 FBXO18Q8NFZ0 1043 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 MRPS27Q92552 414 aaKnown RBP12.57□□□□□ -0.4
LMO3-215ENST00000537304 DDX11Q96FC9 970 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 BRMS1Q9HCU9 246 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 MIS18AQ9NYP9 233 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 PEAK1Q9H792 1746 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 ADCY9O60503 1353 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 MED23Q9ULK4 1368 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 MAP3K19Q56UN5 1328 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 IGSF1Q8N6C5 1336 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 EIF3JO75822 258 aaKnown RBP12.57□□□□□ -0.4
LMO3-215ENST00000537304 ALDH1L1O75891 902 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 CASQ1P31415 396 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 TUBB2AQ13885 445 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 SMC1AQ14683 1233 aaKnown RBP12.57□□□□□ -0.4
LMO3-215ENST00000537304 BRD3Q15059 726 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 TMC6Q7Z403 805 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 TICAM2Q86XR7 235 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 SMARCC2Q8TAQ2 1214 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 RABGGTAQ92696 567 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 TUBB2BQ9BVA1 445 aa12.57□□□□□ -0.4
LMO3-215ENST00000537304 U3KPZ7 1027 aaPredicted RBP12.57□□□□□ -0.4
LMO3-215ENST00000537304 SETD1BQ9UPS6 1966 aaKnown RBP12.57□□□□□ -0.4
LMO3-215ENST00000537304 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.56□□□□□ -0.4
LMO3-215ENST00000537304 NUTM2FA1L443 756 aa12.56□□□□□ -0.4
LMO3-215ENST00000537304 TUBBP07437 444 aa12.56□□□□□ -0.4
LMO3-215ENST00000537304 OAS2P29728 719 aaKnown RBP12.56□□□□□ -0.4
LMO3-215ENST00000537304 NMIQ13287 307 aaPredicted RBP12.56□□□□□ -0.4
LMO3-215ENST00000537304 NUTM2GQ5VZR2 741 aa12.56□□□□□ -0.4
LMO3-215ENST00000537304 USPL1Q5W0Q7 1092 aa12.56□□□□□ -0.4
LMO3-215ENST00000537304 FSIP1Q8NA03 581 aa12.56□□□□□ -0.4
LMO3-215ENST00000537304 CCDC191Q8NCU4 936 aa12.56□□□□□ -0.4
LMO3-215ENST00000537304 ENGASEQ8NFI3 743 aa12.56□□□□□ -0.4
LMO3-215ENST00000537304 DNAAF4Q8WXU2 420 aa12.56□□□□□ -0.4
LMO3-215ENST00000537304 SDF4Q9BRK5 362 aa12.56□□□□□ -0.4
LMO3-215ENST00000537304 ST7Q9NRC1 585 aa12.56□□□□□ -0.4
LMO3-215ENST00000537304 NPHP4O75161 1426 aaPredicted RBP12.56□□□□□ -0.4
LMO3-215ENST00000537304 TOPAZ1Q8N9V7 1692 aa12.56□□□□□ -0.4
LMO3-215ENST00000537304 PLEKHG3A1L390 1219 aa12.55□□□□□ -0.4
LMO3-215ENST00000537304 POLR3GO15318 223 aaPredicted RBP12.55□□□□□ -0.4
LMO3-215ENST00000537304 HSP90B1P14625 803 aaKnown RBP12.55□□□□□ -0.4
LMO3-215ENST00000537304 CC2D1AQ6P1N0 951 aaPredicted RBP12.55□□□□□ -0.4
LMO3-215ENST00000537304 NBPF11Q86T75 865 aa12.55□□□□□ -0.4
LMO3-215ENST00000537304 RGS22Q8NE09 1264 aa12.55□□□□□ -0.4
LMO3-215ENST00000537304 NEK1Q96PY6 1258 aa12.55□□□□□ -0.4
LMO3-215ENST00000537304 USP6P35125 1406 aa12.55□□□□□ -0.4
LMO3-215ENST00000537304 NPHP1O15259 732 aa12.54□□□□□ -0.4
LMO3-215ENST00000537304 PFKFB2O60825 505 aa12.54□□□□□ -0.4
LMO3-215ENST00000537304 URI1O94763 535 aaPredicted RBP12.54□□□□□ -0.4
LMO3-215ENST00000537304 ME1P48163 572 aa12.54□□□□□ -0.4
LMO3-215ENST00000537304 EVCP57679 992 aa12.54□□□□□ -0.4
LMO3-215ENST00000537304 HSP90AB2PQ58FF8 381 aa12.54□□□□□ -0.4
LMO3-215ENST00000537304 BEND3Q5T5X7 828 aa12.54□□□□□ -0.4
LMO3-215ENST00000537304 ADALQ6DHV7 355 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms