RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 SMC3Q9UQE7 1217 aa11.13□□□□□ -0.63
UBE3B-207ENST00000537063 TIMM10P62072 90 aa11.13□□□□□ -0.63
UBE3B-207ENST00000537063 CCDC57Q2TAC2 916 aa11.13□□□□□ -0.63
UBE3B-207ENST00000537063 BLOC1S2Q6QNY1 142 aa11.13□□□□□ -0.63
UBE3B-207ENST00000537063 CHGBP05060 677 aa11.12□□□□□ -0.63
UBE3B-207ENST00000537063 CCDC83Q8IWF9 413 aa11.12□□□□□ -0.63
UBE3B-207ENST00000537063 DOCK2Q92608 1830 aa11.12□□□□□ -0.63
UBE3B-207ENST00000537063 TMEM63CQ9P1W3 806 aa11.12□□□□□ -0.63
UBE3B-207ENST00000537063 NSFL1CQ9UNZ2 370 aaKnown RBP11.12□□□□□ -0.63
UBE3B-207ENST00000537063 AKAP2Q9Y2D5 859 aa11.12□□□□□ -0.63
UBE3B-207ENST00000537063 ZBTB1Q9Y2K1 713 aa11.12□□□□□ -0.63
UBE3B-207ENST00000537063 F13A1P00488 732 aa11.12□□□□□ -0.63
UBE3B-207ENST00000537063 SEC62Q99442 399 aaKnown RBP11.12□□□□□ -0.63
UBE3B-207ENST00000537063 GJB2P29033 226 aa11.11□□□□□ -0.63
UBE3B-207ENST00000537063 FAM89AQ96GI7 184 aa11.11□□□□□ -0.63
UBE3B-207ENST00000537063 LARP6Q9BRS8 491 aaKnown RBP11.11□□□□□ -0.63
UBE3B-207ENST00000537063 CEP126Q9P2H0 1117 aa11.11□□□□□ -0.63
UBE3B-207ENST00000537063 MTMR6Q9Y217 621 aa11.11□□□□□ -0.63
UBE3B-207ENST00000537063 CASZ1Q86V15 1759 aa11.11□□□□□ -0.63
UBE3B-207ENST00000537063 MYH14Q7Z406 1995 aaKnown RBP11.11□□□□□ -0.63
UBE3B-207ENST00000537063 GOLIM4O00461 696 aa11.11□□□□□ -0.63
UBE3B-207ENST00000537063 CTSWP56202 376 aa11.11□□□□□ -0.63
UBE3B-207ENST00000537063 FOXD4L5Q5VV16 416 aaPredicted RBP11.11□□□□□ -0.63
UBE3B-207ENST00000537063 CCDC129Q6ZRS4 1044 aa11.11□□□□□ -0.63
UBE3B-207ENST00000537063 ZNF34Q8IZ26 560 aa11.11□□□□□ -0.63
UBE3B-207ENST00000537063 TTLL11Q8NHH1 800 aa11.11□□□□□ -0.63
UBE3B-207ENST00000537063 FOXD4L4Q8WXT5 416 aaPredicted RBP11.11□□□□□ -0.63
UBE3B-207ENST00000537063 ZNF512BQ96KM6 892 aaPredicted RBP11.11□□□□□ -0.63
UBE3B-207ENST00000537063 NEUROD6Q96NK8 337 aa11.11□□□□□ -0.63
UBE3B-207ENST00000537063 RIPOR2Q9Y4F9 1068 aa11.11□□□□□ -0.63
UBE3B-207ENST00000537063 MYH15Q9Y2K3 1946 aa11.11□□□□□ -0.63
UBE3B-207ENST00000537063 ATRNO75882 1429 aa11.11□□□□□ -0.63
UBE3B-207ENST00000537063 A0A1B0GUL6 1792 aa11.11□□□□□ -0.63
UBE3B-207ENST00000537063 CYP21A2P08686 494 aa11.11□□□□□ -0.63
UBE3B-207ENST00000537063 VGLL2Q8N8G2 317 aa11.11□□□□□ -0.63
UBE3B-207ENST00000537063 MAST3O60307 1309 aa11.1□□□□□ -0.63
UBE3B-207ENST00000537063 SPATA31A5Q5VU36 1347 aa11.1□□□□□ -0.63
UBE3B-207ENST00000537063 SPATA31A7Q8IWB4 1347 aa11.1□□□□□ -0.63
UBE3B-207ENST00000537063 RNF113AO15541 343 aaKnown RBP11.1□□□□□ -0.63
UBE3B-207ENST00000537063 IFIT1P09914 478 aaKnown RBP11.1□□□□□ -0.63
UBE3B-207ENST00000537063 AK7Q96M32 723 aa11.1□□□□□ -0.63
UBE3B-207ENST00000537063 UBN2Q6ZU65 1347 aa11.1□□□□□ -0.63
UBE3B-207ENST00000537063 IFIT5Q13325 482 aaKnown RBP11.1□□□□□ -0.63
UBE3B-207ENST00000537063 EIF5P55010 431 aaKnown RBP11.1□□□□□ -0.63
UBE3B-207ENST00000537063 BARGINQ6ZT62 677 aa11.1□□□□□ -0.63
UBE3B-207ENST00000537063 KLHL34Q8N239 644 aa11.1□□□□□ -0.63
UBE3B-207ENST00000537063 XAGE2Q96GT9 111 aa11.1□□□□□ -0.63
UBE3B-207ENST00000537063 NEK1Q96PY6 1258 aa11.1□□□□□ -0.63
UBE3B-207ENST00000537063 AGXT2Q9BYV1 514 aa11.1□□□□□ -0.63
UBE3B-207ENST00000537063 RBM27Q9P2N5 1060 aaKnown RBP11.1□□□□□ -0.63
UBE3B-207ENST00000537063 PRIM1P49642 420 aaKnown RBP11.09□□□□□ -0.63
UBE3B-207ENST00000537063 INTS5Q6P9B9 1019 aaKnown RBP11.09□□□□□ -0.63
UBE3B-207ENST00000537063 STOX1Q6ZVD7 989 aa11.09□□□□□ -0.63
UBE3B-207ENST00000537063 USP48Q86UV5 1035 aa11.09□□□□□ -0.63
UBE3B-207ENST00000537063 PPP1R9BQ96SB3 815 aa11.09□□□□□ -0.63
UBE3B-207ENST00000537063 ATP6V1DQ9Y5K8 247 aa11.09□□□□□ -0.63
UBE3B-207ENST00000537063 ADORA1P30542 326 aa11.09□□□□□ -0.63
UBE3B-207ENST00000537063 LRSAM1Q6UWE0 723 aa11.09□□□□□ -0.63
UBE3B-207ENST00000537063 SCN7AQ01118 1682 aa11.09□□□□□ -0.63
UBE3B-207ENST00000537063 SYNE4Q8N205 404 aa11.09□□□□□ -0.63
UBE3B-207ENST00000537063 ARXQ96QS3 562 aa11.09□□□□□ -0.63
UBE3B-207ENST00000537063 GREM2Q9H772 168 aa11.09□□□□□ -0.63
UBE3B-207ENST00000537063 MYO5AQ9Y4I1 1855 aaKnown RBP11.08□□□□□ -0.64
UBE3B-207ENST00000537063 ZFYP08048 801 aaPredicted RBP11.08□□□□□ -0.64
UBE3B-207ENST00000537063 HMGB1P09429 215 aaKnown RBP11.08□□□□□ -0.64
UBE3B-207ENST00000537063 ITGA6P23229 1130 aa11.08□□□□□ -0.64
UBE3B-207ENST00000537063 CCDC158Q5M9N0 1113 aa11.08□□□□□ -0.64
UBE3B-207ENST00000537063 NECAB1Q8N987 351 aa11.08□□□□□ -0.64
UBE3B-207ENST00000537063 ZNF330Q9Y3S2 320 aaPredicted RBP11.08□□□□□ -0.64
UBE3B-207ENST00000537063 PDE8AO60658 829 aa11.08□□□□□ -0.64
UBE3B-207ENST00000537063 DZIP3Q86Y13 1208 aaKnown RBP11.08□□□□□ -0.64
UBE3B-207ENST00000537063 FBXL16Q8N461 479 aa11.08□□□□□ -0.64
UBE3B-207ENST00000537063 GTF3C6Q969F1 213 aa11.08□□□□□ -0.64
UBE3B-207ENST00000537063 RTL9Q8NET4 1388 aa11.08□□□□□ -0.64
UBE3B-207ENST00000537063 M0R2C6 588 aa11.08□□□□□ -0.64
UBE3B-207ENST00000537063 IRS4O14654 1257 aaPredicted RBP11.08□□□□□ -0.64
UBE3B-207ENST00000537063 FOXP2O15409 715 aa11.08□□□□□ -0.64
UBE3B-207ENST00000537063 GADD45BO75293 160 aaPredicted RBP11.08□□□□□ -0.64
UBE3B-207ENST00000537063 HSPD1P10809 573 aaKnown RBP11.08□□□□□ -0.64
UBE3B-207ENST00000537063 NCLP19338 710 aaKnown RBP11.08□□□□□ -0.64
UBE3B-207ENST00000537063 CNPY2Q9Y2B0 182 aa11.08□□□□□ -0.64
UBE3B-207ENST00000537063 GPTP24298 496 aa11.07□□□□□ -0.64
UBE3B-207ENST00000537063 NASPP49321 788 aaPredicted RBP11.07□□□□□ -0.64
UBE3B-207ENST00000537063 EXOSC10Q01780 885 aaKnown RBP11.07□□□□□ -0.64
UBE3B-207ENST00000537063 DDB1Q16531 1140 aa11.07□□□□□ -0.64
UBE3B-207ENST00000537063 LRRFIP1Q32MZ4 808 aaKnown RBP11.07□□□□□ -0.64
UBE3B-207ENST00000537063 MARCH10Q8NA82 808 aaPredicted RBP11.07□□□□□ -0.64
UBE3B-207ENST00000537063 ANKRD18BA2A2Z9 1011 aa11.07□□□□□ -0.64
UBE3B-207ENST00000537063 PDCP20941 246 aa11.07□□□□□ -0.64
UBE3B-207ENST00000537063 SLFNL1Q499Z3 407 aa11.07□□□□□ -0.64
UBE3B-207ENST00000537063 TTC39AQ5SRH9 613 aa11.07□□□□□ -0.64
UBE3B-207ENST00000537063 CCDC87Q9NVE4 849 aa11.07□□□□□ -0.64
UBE3B-207ENST00000537063 CCDC173Q0VFZ6 552 aa11.07□□□□□ -0.64
UBE3B-207ENST00000537063 SCARF1Q14162 830 aa11.07□□□□□ -0.64
UBE3B-207ENST00000537063 ATP2B3Q16720 1220 aa11.07□□□□□ -0.64
UBE3B-207ENST00000537063 OSBP2Q969R2 916 aa11.07□□□□□ -0.64
UBE3B-207ENST00000537063 TCEANC2Q96MN5 208 aa11.07□□□□□ -0.64
UBE3B-207ENST00000537063 RBSNQ9H1K0 784 aa11.07□□□□□ -0.64
UBE3B-207ENST00000537063 UBE2HP62256 183 aa11.06□□□□□ -0.64
UBE3B-207ENST00000537063 SYAP1Q96A49 352 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms