RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 VEGFBP49765 207 aa16.85■□□□□ 0.29
MRPS35-202ENST00000536569 G2E3Q7L622 706 aa16.85■□□□□ 0.29
MRPS35-202ENST00000536569 TTLL11Q8NHH1 800 aa16.85■□□□□ 0.29
MRPS35-202ENST00000536569 PLA2G12BQ9BX93 195 aa16.85■□□□□ 0.29
MRPS35-202ENST00000536569 MYH16Q9H6N6 1097 aa16.85■□□□□ 0.29
MRPS35-202ENST00000536569 DBNDD1Q9H9R9 158 aa16.85■□□□□ 0.29
MRPS35-202ENST00000536569 XDHP47989 1333 aa16.85■□□□□ 0.29
MRPS35-202ENST00000536569 RIMBP2O15034 1052 aa16.84■□□□□ 0.29
MRPS35-202ENST00000536569 UFL1O94874 794 aa16.84■□□□□ 0.29
MRPS35-202ENST00000536569 FKBP5Q13451 457 aaPredicted RBP16.84■□□□□ 0.29
MRPS35-202ENST00000536569 CWF19L2Q2TBE0 894 aaKnown RBP16.84■□□□□ 0.29
MRPS35-202ENST00000536569 LINS1Q8NG48 757 aa16.84■□□□□ 0.29
MRPS35-202ENST00000536569 DNAAF4Q8WXU2 420 aa16.84■□□□□ 0.29
MRPS35-202ENST00000536569 BSDC1Q9NW68 430 aaPredicted RBP16.84■□□□□ 0.29
MRPS35-202ENST00000536569 ABT1Q9ULW3 272 aaKnown RBP16.84■□□□□ 0.29
MRPS35-202ENST00000536569 G3V3G9 751 aa16.83■□□□□ 0.28
MRPS35-202ENST00000536569 ZNF609O15014 1411 aa16.83■□□□□ 0.28
MRPS35-202ENST00000536569 VIL1P09327 827 aaKnown RBP16.83■□□□□ 0.28
MRPS35-202ENST00000536569 ATP2B4P23634 1241 aa16.83■□□□□ 0.28
MRPS35-202ENST00000536569 EXOSC9Q06265 439 aaKnown RBP16.83■□□□□ 0.28
MRPS35-202ENST00000536569 GCKRQ14397 625 aa16.83■□□□□ 0.28
MRPS35-202ENST00000536569 DCAF8Q5TAQ9 597 aa16.83■□□□□ 0.28
MRPS35-202ENST00000536569 COL13A1Q5TAT6 717 aaPredicted RBP16.83■□□□□ 0.28
MRPS35-202ENST00000536569 CDC37L1Q7L3B6 337 aa16.83■□□□□ 0.28
MRPS35-202ENST00000536569 MICALL2Q8IY33 904 aa16.83■□□□□ 0.28
MRPS35-202ENST00000536569 JARID2Q92833 1246 aaPredicted RBP16.83■□□□□ 0.28
MRPS35-202ENST00000536569 HIRAP54198 1017 aaPredicted RBP16.82■□□□□ 0.28
MRPS35-202ENST00000536569 DOK7Q18PE1 504 aa16.82■□□□□ 0.28
MRPS35-202ENST00000536569 CST9Q5W186 159 aa16.82■□□□□ 0.28
MRPS35-202ENST00000536569 UBE3BQ7Z3V4 1068 aa16.82■□□□□ 0.28
MRPS35-202ENST00000536569 MYH3P11055 1940 aa16.82■□□□□ 0.28
MRPS35-202ENST00000536569 TRPM7Q96QT4 1865 aa16.82■□□□□ 0.28
MRPS35-202ENST00000536569 WDR33Q9C0J8 1336 aaKnown RBP16.81■□□□□ 0.28
MRPS35-202ENST00000536569 ECE1P42892 770 aa16.81■□□□□ 0.28
MRPS35-202ENST00000536569 PODNQ7Z5L7 613 aa16.81■□□□□ 0.28
MRPS35-202ENST00000536569 TRPM4Q8TD43 1214 aa16.81■□□□□ 0.28
MRPS35-202ENST00000536569 AIDAQ96BJ3 306 aa16.81■□□□□ 0.28
MRPS35-202ENST00000536569 HHIPL1Q96JK4 782 aa16.81■□□□□ 0.28
MRPS35-202ENST00000536569 CCDC85AQ96PX6 553 aaPredicted RBP16.81■□□□□ 0.28
MRPS35-202ENST00000536569 GREM2Q9H772 168 aa16.81■□□□□ 0.28
MRPS35-202ENST00000536569 ZBTB12Q9Y330 459 aaPredicted RBP16.81■□□□□ 0.28
MRPS35-202ENST00000536569 SALL2Q9Y467 1007 aaPredicted RBP16.81■□□□□ 0.28
MRPS35-202ENST00000536569 TLL2Q9Y6L7 1015 aa16.81■□□□□ 0.28
MRPS35-202ENST00000536569 TRAF5O00463 557 aa16.8■□□□□ 0.28
MRPS35-202ENST00000536569 CASP7P55210 303 aa16.8■□□□□ 0.28
MRPS35-202ENST00000536569 MAP2K1Q02750 393 aaPredicted RBP16.8■□□□□ 0.28
MRPS35-202ENST00000536569 FAM9BQ8IZU0 186 aa16.8■□□□□ 0.28
MRPS35-202ENST00000536569 AGBL3Q8NEM8 1001 aa16.8■□□□□ 0.28
MRPS35-202ENST00000536569 WBP1LQ9NX94 342 aa16.8■□□□□ 0.28
MRPS35-202ENST00000536569 MINPP1Q9UNW1 487 aa16.8■□□□□ 0.28
MRPS35-202ENST00000536569 CSF1RP07333 972 aa16.79■□□□□ 0.28
MRPS35-202ENST00000536569 IGHMBP2P38935 993 aaKnown RBP16.79■□□□□ 0.28
MRPS35-202ENST00000536569 KCNQ5Q9NR82 932 aa16.79■□□□□ 0.28
MRPS35-202ENST00000536569 MED23Q9ULK4 1368 aa16.78■□□□□ 0.28
MRPS35-202ENST00000536569 CELF2O95319 508 aaKnown RBP16.78■□□□□ 0.28
MRPS35-202ENST00000536569 CTCFP49711 727 aaPredicted RBP16.78■□□□□ 0.28
MRPS35-202ENST00000536569 FMR1Q06787 632 aaKnown RBP eCLIP16.78■□□□□ 0.28
MRPS35-202ENST00000536569 SAMD7Q7Z3H4 446 aa16.78■□□□□ 0.28
MRPS35-202ENST00000536569 TNS4Q8IZW8 715 aa16.78■□□□□ 0.28
MRPS35-202ENST00000536569 GPR101Q96P66 508 aaPredicted RBP16.78■□□□□ 0.28
MRPS35-202ENST00000536569 GLIS2Q9BZE0 524 aaPredicted RBP16.78■□□□□ 0.28
MRPS35-202ENST00000536569 SPINK5Q9NQ38 1064 aaPredicted RBP16.78■□□□□ 0.28
MRPS35-202ENST00000536569 PRDM10Q9NQV6 1147 aa16.78■□□□□ 0.28
MRPS35-202ENST00000536569 LEMD3Q9Y2U8 911 aa16.78■□□□□ 0.28
MRPS35-202ENST00000536569 ZNF521Q96K83 1311 aa16.77■□□□□ 0.28
MRPS35-202ENST00000536569 SHTN1A0MZ66 631 aa16.77■□□□□ 0.28
MRPS35-202ENST00000536569 ITGA6P23229 1130 aa16.77■□□□□ 0.28
MRPS35-202ENST00000536569 MMP14P50281 582 aa16.77■□□□□ 0.28
MRPS35-202ENST00000536569 CCT4P50991 539 aaKnown RBP16.77■□□□□ 0.28
MRPS35-202ENST00000536569 ZNF280AP59817 542 aaPredicted RBP16.77■□□□□ 0.28
MRPS35-202ENST00000536569 RSBN1LQ6PCB5 846 aaPredicted RBP16.77■□□□□ 0.28
MRPS35-202ENST00000536569 SAPCD2Q86UD0 394 aa16.77■□□□□ 0.28
MRPS35-202ENST00000536569 CAPNS2Q96L46 248 aa16.77■□□□□ 0.28
MRPS35-202ENST00000536569 ANKRD2Q9GZV1 360 aa16.77■□□□□ 0.28
MRPS35-202ENST00000536569 USP17L3A6NCW0 530 aa16.76■□□□□ 0.27
MRPS35-202ENST00000536569 USP17L4A6NCW7 530 aa16.76■□□□□ 0.27
MRPS35-202ENST00000536569 FOXN1O15353 648 aa16.76■□□□□ 0.27
MRPS35-202ENST00000536569 MAP2K2P36507 400 aa16.76■□□□□ 0.27
MRPS35-202ENST00000536569 KIF4BQ2VIQ3 1234 aa16.76■□□□□ 0.27
MRPS35-202ENST00000536569 TBC1D10BQ4KMP7 808 aaPredicted RBP16.76■□□□□ 0.27
MRPS35-202ENST00000536569 BEND3Q5T5X7 828 aa16.76■□□□□ 0.27
MRPS35-202ENST00000536569 USP17L1Q7RTZ2 530 aa16.76■□□□□ 0.27
MRPS35-202ENST00000536569 DCPSQ96C86 337 aaKnown RBP16.76■□□□□ 0.27
MRPS35-202ENST00000536569 MPHOSPH8Q99549 860 aa16.76■□□□□ 0.27
MRPS35-202ENST00000536569 THSD7BQ9C0I4 1608 aa16.76■□□□□ 0.27
MRPS35-202ENST00000536569 PSME4Q14997 1843 aa16.75■□□□□ 0.27
MRPS35-202ENST00000536569 SCN9AQ15858 1988 aa16.75■□□□□ 0.27
MRPS35-202ENST00000536569 KRT26Q7Z3Y9 468 aa16.75■□□□□ 0.27
MRPS35-202ENST00000536569 GMLQ99445 158 aa16.75■□□□□ 0.27
MRPS35-202ENST00000536569 COA1Q9GZY4 146 aa16.75■□□□□ 0.27
MRPS35-202ENST00000536569 ANKRD18BA2A2Z9 1011 aa16.74■□□□□ 0.27
MRPS35-202ENST00000536569 ALDH1L1O75891 902 aa16.74■□□□□ 0.27
MRPS35-202ENST00000536569 FAM161AQ3B820 660 aa16.74■□□□□ 0.27
MRPS35-202ENST00000536569 USP48Q86UV5 1035 aa16.74■□□□□ 0.27
MRPS35-202ENST00000536569 MYO3BQ8WXR4 1341 aa16.73■□□□□ 0.27
MRPS35-202ENST00000536569 EGFRP00533 1210 aa16.73■□□□□ 0.27
MRPS35-202ENST00000536569 USP17L8P0C7I0 530 aa16.73■□□□□ 0.27
MRPS35-202ENST00000536569 CYP4F22Q6NT55 531 aa16.73■□□□□ 0.27
MRPS35-202ENST00000536569 PAXIP1Q6ZW49 1069 aaPredicted RBP16.73■□□□□ 0.27
MRPS35-202ENST00000536569 BEGAINQ9BUH8 593 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms