RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 DDX60Q8IY21 1712 aaKnown RBP16■□□□□ 0.15
PRKDC-207ENST00000536483 PSMD14O00487 310 aa16■□□□□ 0.15
PRKDC-207ENST00000536483 IRS4O14654 1257 aaPredicted RBP16■□□□□ 0.15
PRKDC-207ENST00000536483 TWISTNBQ3B726 338 aaPredicted RBP16■□□□□ 0.15
PRKDC-207ENST00000536483 SAMD7Q7Z3H4 446 aa16■□□□□ 0.15
PRKDC-207ENST00000536483 DPF2Q92785 391 aa16■□□□□ 0.15
PRKDC-207ENST00000536483 DOK7Q18PE1 504 aa15.99■□□□□ 0.15
PRKDC-207ENST00000536483 DLK2Q6UY11 383 aa15.99■□□□□ 0.15
PRKDC-207ENST00000536483 USP48Q86UV5 1035 aa15.99■□□□□ 0.15
PRKDC-207ENST00000536483 HHIPL1Q96JK4 782 aa15.99■□□□□ 0.15
PRKDC-207ENST00000536483 KCNQ5Q9NR82 932 aa15.99■□□□□ 0.15
PRKDC-207ENST00000536483 LRRC37AA6NMS7 1700 aa15.99■□□□□ 0.15
PRKDC-207ENST00000536483 COL4A1P02462 1669 aa15.99■□□□□ 0.15
PRKDC-207ENST00000536483 VAMP4O75379 141 aa15.98■□□□□ 0.15
PRKDC-207ENST00000536483 RPS8P62241 208 aaKnown RBP15.98■□□□□ 0.15
PRKDC-207ENST00000536483 GOLGA2Q08379 1002 aa15.98■□□□□ 0.15
PRKDC-207ENST00000536483 TBC1D10BQ4KMP7 808 aaPredicted RBP15.98■□□□□ 0.15
PRKDC-207ENST00000536483 RIC3Q7Z5B4 369 aa15.98■□□□□ 0.15
PRKDC-207ENST00000536483 TBC1D16Q8TBP0 767 aa15.98■□□□□ 0.15
PRKDC-207ENST00000536483 SPINK5Q9NQ38 1064 aaPredicted RBP15.98■□□□□ 0.15
PRKDC-207ENST00000536483 ECE2O60344 883 aa15.97■□□□□ 0.15
PRKDC-207ENST00000536483 DDX58O95786 925 aaKnown RBP15.97■□□□□ 0.15
PRKDC-207ENST00000536483 EGFRP00533 1210 aa15.97■□□□□ 0.15
PRKDC-207ENST00000536483 RBM26Q5T8P6 1007 aaKnown RBP15.97■□□□□ 0.15
PRKDC-207ENST00000536483 KSR2Q6VAB6 950 aa15.97■□□□□ 0.15
PRKDC-207ENST00000536483 ZBTB38Q8NAP3 1195 aaPredicted RBP15.97■□□□□ 0.15
PRKDC-207ENST00000536483 CCDC191Q8NCU4 936 aa15.97■□□□□ 0.15
PRKDC-207ENST00000536483 EYA3Q99504 573 aa15.97■□□□□ 0.15
PRKDC-207ENST00000536483 METTL22Q9BUU2 404 aaPredicted RBP15.97■□□□□ 0.15
PRKDC-207ENST00000536483 SEC31BQ9NQW1 1179 aa15.97■□□□□ 0.15
PRKDC-207ENST00000536483 MYD88Q99836 296 aa15.96■□□□□ 0.15
PRKDC-207ENST00000536483 STK31Q9BXU1 1019 aa15.96■□□□□ 0.15
PRKDC-207ENST00000536483 MYH16Q9H6N6 1097 aa15.96■□□□□ 0.15
PRKDC-207ENST00000536483 RTL9Q8NET4 1388 aa15.96■□□□□ 0.15
PRKDC-207ENST00000536483 RPS12P25398 132 aaKnown RBP15.95■□□□□ 0.14
PRKDC-207ENST00000536483 BRPF1P55201 1214 aaPredicted RBP15.95■□□□□ 0.14
PRKDC-207ENST00000536483 HUNKP57058 714 aa15.95■□□□□ 0.14
PRKDC-207ENST00000536483 KRT26Q7Z3Y9 468 aa15.95■□□□□ 0.14
PRKDC-207ENST00000536483 JARID2Q92833 1246 aaPredicted RBP15.95■□□□□ 0.14
PRKDC-207ENST00000536483 ZIC5Q96T25 663 aa15.95■□□□□ 0.14
PRKDC-207ENST00000536483 ZC3H12CQ9C0D7 883 aaKnown RBP15.95■□□□□ 0.14
PRKDC-207ENST00000536483 CCDC85CA6NKD9 419 aa15.94■□□□□ 0.14
PRKDC-207ENST00000536483 CA12O43570 354 aa15.94■□□□□ 0.14
PRKDC-207ENST00000536483 SLC4A2P04920 1241 aa15.94■□□□□ 0.14
PRKDC-207ENST00000536483 EXOSC9Q06265 439 aaKnown RBP15.94■□□□□ 0.14
PRKDC-207ENST00000536483 CCDC85AQ96PX6 553 aaPredicted RBP15.94■□□□□ 0.14
PRKDC-207ENST00000536483 PODXL2Q9NZ53 605 aa15.94■□□□□ 0.14
PRKDC-207ENST00000536483 SALL2Q9Y467 1007 aaPredicted RBP15.94■□□□□ 0.14
PRKDC-207ENST00000536483 PI4KAP2A4QPH2 592 aa15.93■□□□□ 0.14
PRKDC-207ENST00000536483 ADM5C9JUS6 153 aa15.93■□□□□ 0.14
PRKDC-207ENST00000536483 UFL1O94874 794 aa15.93■□□□□ 0.14
PRKDC-207ENST00000536483 PCCAP05165 728 aaPredicted RBP15.93■□□□□ 0.14
PRKDC-207ENST00000536483 HSP90B1P14625 803 aaKnown RBP15.93■□□□□ 0.14
PRKDC-207ENST00000536483 NOGQ13253 232 aa15.93■□□□□ 0.14
PRKDC-207ENST00000536483 PI4KAP1Q8N8J0 262 aa15.93■□□□□ 0.14
PRKDC-207ENST00000536483 DCPSQ96C86 337 aaKnown RBP15.93■□□□□ 0.14
PRKDC-207ENST00000536483 ANKIB1Q9P2G1 1089 aa15.93■□□□□ 0.14
PRKDC-207ENST00000536483 G3V3G9 751 aa15.92■□□□□ 0.14
PRKDC-207ENST00000536483 VIL1P09327 827 aaKnown RBP15.92■□□□□ 0.14
PRKDC-207ENST00000536483 KIF4BQ2VIQ3 1234 aa15.92■□□□□ 0.14
PRKDC-207ENST00000536483 CCDC152Q4G0S7 254 aa15.92■□□□□ 0.14
PRKDC-207ENST00000536483 DCAF8Q5TAQ9 597 aa15.92■□□□□ 0.14
PRKDC-207ENST00000536483 GBA2Q9HCG7 927 aaPredicted RBP15.92■□□□□ 0.14
PRKDC-207ENST00000536483 CWC25Q9NXE8 425 aaPredicted RBP15.92■□□□□ 0.14
PRKDC-207ENST00000536483 GGA1Q9UJY5 639 aa15.92■□□□□ 0.14
PRKDC-207ENST00000536483 MAP3K2Q9Y2U5 619 aa15.92■□□□□ 0.14
PRKDC-207ENST00000536483 PDE8AO60658 829 aa15.91■□□□□ 0.14
PRKDC-207ENST00000536483 IGKV5-2P06315 115 aa15.91■□□□□ 0.14
PRKDC-207ENST00000536483 FLIIQ13045 1269 aa15.91■□□□□ 0.14
PRKDC-207ENST00000536483 FAM161AQ3B820 660 aa15.91■□□□□ 0.14
PRKDC-207ENST00000536483 RGMBQ6NW40 437 aa15.91■□□□□ 0.14
PRKDC-207ENST00000536483 G2E3Q7L622 706 aa15.91■□□□□ 0.14
PRKDC-207ENST00000536483 C2orf69Q8N8R5 385 aa15.91■□□□□ 0.14
PRKDC-207ENST00000536483 POLR2AP24928 1970 aaKnown RBP15.91■□□□□ 0.14
PRKDC-207ENST00000536483 ASTN2O75129 1339 aaPredicted RBP15.91■□□□□ 0.14
PRKDC-207ENST00000536483 FAM155AB1AL88 458 aaPredicted RBP15.9■□□□□ 0.14
PRKDC-207ENST00000536483 TRMT2AQ8IZ69 625 aaKnown RBP15.9■□□□□ 0.14
PRKDC-207ENST00000536483 MCOLN1Q9GZU1 580 aa15.9■□□□□ 0.14
PRKDC-207ENST00000536483 GGA3Q9NZ52 723 aa15.9■□□□□ 0.14
PRKDC-207ENST00000536483 SCN9AQ15858 1988 aa15.89■□□□□ 0.13
PRKDC-207ENST00000536483 CASP8AP2Q9UKL3 1982 aa15.89■□□□□ 0.13
PRKDC-207ENST00000536483 E9PSI1 815 aa15.89■□□□□ 0.13
PRKDC-207ENST00000536483 RSBN1LQ6PCB5 846 aaPredicted RBP15.89■□□□□ 0.13
PRKDC-207ENST00000536483 ANKRD18AQ8IVF6 992 aa15.89■□□□□ 0.13
PRKDC-207ENST00000536483 SULF1Q8IWU6 871 aa15.89■□□□□ 0.13
PRKDC-207ENST00000536483 NEURL1BA8MQ27 555 aa15.88■□□□□ 0.13
PRKDC-207ENST00000536483 ZNF157P51786 506 aaPredicted RBP15.88■□□□□ 0.13
PRKDC-207ENST00000536483 SLFN5Q08AF3 891 aa15.88■□□□□ 0.13
PRKDC-207ENST00000536483 NEXNQ0ZGT2 675 aa15.88■□□□□ 0.13
PRKDC-207ENST00000536483 CCDC102AQ96A19 550 aa15.88■□□□□ 0.13
PRKDC-207ENST00000536483 CACNA1FO60840 1977 aa15.87■□□□□ 0.13
PRKDC-207ENST00000536483 H7C1W4 665 aa15.87■□□□□ 0.13
PRKDC-207ENST00000536483 ATP2B4P23634 1241 aa15.87■□□□□ 0.13
PRKDC-207ENST00000536483 ZNF280AP59817 542 aaPredicted RBP15.87■□□□□ 0.13
PRKDC-207ENST00000536483 KIF23Q02241 960 aaPredicted RBP15.87■□□□□ 0.13
PRKDC-207ENST00000536483 DGKZQ13574 1117 aa15.87■□□□□ 0.13
PRKDC-207ENST00000536483 SCARF1Q14162 830 aa15.87■□□□□ 0.13
PRKDC-207ENST00000536483 AGBL3Q8NEM8 1001 aa15.87■□□□□ 0.13
PRKDC-207ENST00000536483 LINS1Q8NG48 757 aa15.87■□□□□ 0.13
PRKDC-207ENST00000536483 DNAAF4Q8WXU2 420 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms