RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 A0A0G2JLW4 131 aa14.22□□□□□ -0.13
CDCA3-206ENST00000536241 BBOX1O75936 387 aa14.22□□□□□ -0.13
CDCA3-206ENST00000536241 ALDH1B1P30837 517 aa14.22□□□□□ -0.13
CDCA3-206ENST00000536241 KLHL34Q8N239 644 aa14.22□□□□□ -0.13
CDCA3-206ENST00000536241 HELBQ8NG08 1087 aaPredicted RBP14.22□□□□□ -0.13
CDCA3-206ENST00000536241 COL4A1P02462 1669 aa14.22□□□□□ -0.13
CDCA3-206ENST00000536241 DPEP1P16444 411 aa14.21□□□□□ -0.13
CDCA3-206ENST00000536241 METTL24Q5JXM2 366 aa14.21□□□□□ -0.13
CDCA3-206ENST00000536241 MINPP1Q9UNW1 487 aa14.21□□□□□ -0.13
CDCA3-206ENST00000536241 TAF5LO75529 589 aa14.2□□□□□ -0.14
CDCA3-206ENST00000536241 PDE4AP27815 886 aa14.2□□□□□ -0.14
CDCA3-206ENST00000536241 CHRNDQ07001 517 aa14.2□□□□□ -0.14
CDCA3-206ENST00000536241 STYK1Q6J9G0 422 aa14.2□□□□□ -0.14
CDCA3-206ENST00000536241 CLASRPQ8N2M8 674 aaKnown RBP14.2□□□□□ -0.14
CDCA3-206ENST00000536241 EAF2Q96CJ1 260 aaPredicted RBP14.2□□□□□ -0.14
CDCA3-206ENST00000536241 C10orf71Q711Q0 1435 aa14.2□□□□□ -0.14
CDCA3-206ENST00000536241 MROH5Q6ZUA9 1318 aa14.2□□□□□ -0.14
CDCA3-206ENST00000536241 KCNA3P22001 575 aa14.19□□□□□ -0.14
CDCA3-206ENST00000536241 TGFB2P61812 414 aa14.19□□□□□ -0.14
CDCA3-206ENST00000536241 TIMM10P62072 90 aa14.19□□□□□ -0.14
CDCA3-206ENST00000536241 SLC51AQ86UW1 340 aa14.19□□□□□ -0.14
CDCA3-206ENST00000536241 CCDC8Q9H0W5 538 aaPredicted RBP14.19□□□□□ -0.14
CDCA3-206ENST00000536241 SNAP23O00161 211 aa14.18□□□□□ -0.14
CDCA3-206ENST00000536241 PDE8BO95263 885 aa14.18□□□□□ -0.14
CDCA3-206ENST00000536241 RGS3P49796 1198 aa14.18□□□□□ -0.14
CDCA3-206ENST00000536241 TNNI3KQ59H18 835 aa14.18□□□□□ -0.14
CDCA3-206ENST00000536241 AACSQ86V21 672 aa14.18□□□□□ -0.14
CDCA3-206ENST00000536241 VGLL2Q8N8G2 317 aa14.18□□□□□ -0.14
CDCA3-206ENST00000536241 OTUD7AQ8TE49 926 aaPredicted RBP14.18□□□□□ -0.14
CDCA3-206ENST00000536241 CNKSR1Q969H4 720 aa14.18□□□□□ -0.14
CDCA3-206ENST00000536241 CD2APQ9Y5K6 639 aa14.18□□□□□ -0.14
CDCA3-206ENST00000536241 FPGT-TNNI3KV9GXZ4 949 aa14.18□□□□□ -0.14
CDCA3-206ENST00000536241 WTIPA6NIX2 430 aaPredicted RBP14.18□□□□□ -0.14
CDCA3-206ENST00000536241 PPEF1O14829 653 aaPredicted RBP14.18□□□□□ -0.14
CDCA3-206ENST00000536241 SP8Q8IXZ3 490 aa14.18□□□□□ -0.14
CDCA3-206ENST00000536241 NEUROD6Q96NK8 337 aa14.18□□□□□ -0.14
CDCA3-206ENST00000536241 AKAP2Q9Y2D5 859 aa14.18□□□□□ -0.14
CDCA3-206ENST00000536241 IFIT2P09913 472 aaKnown RBP14.17□□□□□ -0.14
CDCA3-206ENST00000536241 PLEKHM2Q8IWE5 1019 aa14.17□□□□□ -0.14
CDCA3-206ENST00000536241 GPR108Q9NPR9 543 aa14.17□□□□□ -0.14
CDCA3-206ENST00000536241 ZNF219Q9P2Y4 722 aaPredicted RBP14.17□□□□□ -0.14
CDCA3-206ENST00000536241 ATP6V0A2Q9Y487 856 aa14.17□□□□□ -0.14
CDCA3-206ENST00000536241 SPEF2Q9C093 1822 aa14.17□□□□□ -0.14
CDCA3-206ENST00000536241 A0A1B0GUL7 405 aa14.16□□□□□ -0.14
CDCA3-206ENST00000536241 PRPF40BQ6NWY9 871 aaKnown RBP14.16□□□□□ -0.14
CDCA3-206ENST00000536241 OLFM4Q6UX06 510 aa14.16□□□□□ -0.14
CDCA3-206ENST00000536241 TMC4Q7Z404 712 aa14.16□□□□□ -0.14
CDCA3-206ENST00000536241 TTLL6Q8N841 843 aa14.16□□□□□ -0.14
CDCA3-206ENST00000536241 ANKRD2Q9GZV1 360 aa14.16□□□□□ -0.14
CDCA3-206ENST00000536241 PIM2Q9P1W9 311 aa14.16□□□□□ -0.14
CDCA3-206ENST00000536241 ANKIB1Q9P2G1 1089 aa14.16□□□□□ -0.14
CDCA3-206ENST00000536241 WWC3Q9ULE0 1092 aa14.16□□□□□ -0.14
CDCA3-206ENST00000536241 NSFL1CQ9UNZ2 370 aaKnown RBP14.16□□□□□ -0.14
CDCA3-206ENST00000536241 FGFR2P21802 821 aa14.15□□□□□ -0.14
CDCA3-206ENST00000536241 GPSM2P81274 684 aa14.15□□□□□ -0.14
CDCA3-206ENST00000536241 ATP2B3Q16720 1220 aa14.15□□□□□ -0.14
CDCA3-206ENST00000536241 TLR7Q9NYK1 1049 aaKnown RBP14.15□□□□□ -0.14
CDCA3-206ENST00000536241 COL11A2P13942 1736 aaPredicted RBP14.15□□□□□ -0.14
CDCA3-206ENST00000536241 KIF13BQ9NQT8 1826 aa14.14□□□□□ -0.15
CDCA3-206ENST00000536241 ADORA1P30542 326 aa14.14□□□□□ -0.15
CDCA3-206ENST00000536241 PUM3Q15397 648 aaKnown RBP14.14□□□□□ -0.15
CDCA3-206ENST00000536241 NLGN2Q8NFZ4 835 aa14.14□□□□□ -0.15
CDCA3-206ENST00000536241 C7orf43Q8WVR3 580 aa14.14□□□□□ -0.15
CDCA3-206ENST00000536241 LPIN2Q92539 896 aa14.14□□□□□ -0.15
CDCA3-206ENST00000536241 DBNDD2Q9BQY9 259 aa14.14□□□□□ -0.15
CDCA3-206ENST00000536241 FHDC1Q9C0D6 1143 aaPredicted RBP14.14□□□□□ -0.15
CDCA3-206ENST00000536241 TMX4Q9H1E5 349 aaPredicted RBP14.14□□□□□ -0.15
CDCA3-206ENST00000536241 DBNLQ9UJU6 430 aaKnown RBP14.14□□□□□ -0.15
CDCA3-206ENST00000536241 SLX4Q8IY92 1834 aa14.14□□□□□ -0.15
CDCA3-206ENST00000536241 C21orf2O43822 256 aa14.13□□□□□ -0.15
CDCA3-206ENST00000536241 PDE1AP54750 535 aa14.13□□□□□ -0.15
CDCA3-206ENST00000536241 UBE4AQ14139 1066 aa14.13□□□□□ -0.15
CDCA3-206ENST00000536241 TSHZ3Q63HK5 1081 aa14.13□□□□□ -0.15
CDCA3-206ENST00000536241 XAGE2Q96GT9 111 aa14.13□□□□□ -0.15
CDCA3-206ENST00000536241 LEMD3Q9Y2U8 911 aa14.13□□□□□ -0.15
CDCA3-206ENST00000536241 SALL3Q9BXA9 1300 aa14.13□□□□□ -0.15
CDCA3-206ENST00000536241 LRP5O75197 1615 aa14.13□□□□□ -0.15
CDCA3-206ENST00000536241 IFIT1P09914 478 aaKnown RBP14.12□□□□□ -0.15
CDCA3-206ENST00000536241 SLC5A1P13866 664 aa14.12□□□□□ -0.15
CDCA3-206ENST00000536241 MX1P20591 662 aa14.12□□□□□ -0.15
CDCA3-206ENST00000536241 KCNJ4P48050 445 aa14.12□□□□□ -0.15
CDCA3-206ENST00000536241 MPNDQ8N594 471 aa14.12□□□□□ -0.15
CDCA3-206ENST00000536241 STAP2Q9UGK3 403 aa14.12□□□□□ -0.15
CDCA3-206ENST00000536241 ZNF804BA4D1E1 1349 aa14.12□□□□□ -0.15
CDCA3-206ENST00000536241 XDHP47989 1333 aa14.12□□□□□ -0.15
CDCA3-206ENST00000536241 ATP2B4P23634 1241 aa14.12□□□□□ -0.15
CDCA3-206ENST00000536241 DALRD3Q5D0E6 543 aaKnown RBP14.12□□□□□ -0.15
CDCA3-206ENST00000536241 GORABQ5T7V8 394 aa14.12□□□□□ -0.15
CDCA3-206ENST00000536241 SYT17Q9BSW7 474 aa14.12□□□□□ -0.15
CDCA3-206ENST00000536241 PODXL2Q9NZ53 605 aa14.12□□□□□ -0.15
CDCA3-206ENST00000536241 POLLQ9UGP5 575 aa14.12□□□□□ -0.15
CDCA3-206ENST00000536241 C6orf229H3BNL8 230 aa14.11□□□□□ -0.15
CDCA3-206ENST00000536241 CACNA1SQ13698 1873 aa14.11□□□□□ -0.15
CDCA3-206ENST00000536241 OSBPL3Q9H4L5 887 aa14.11□□□□□ -0.15
CDCA3-206ENST00000536241 ECHDC1Q9NTX5 307 aa14.11□□□□□ -0.15
CDCA3-206ENST00000536241 GGA1Q9UJY5 639 aa14.11□□□□□ -0.15
CDCA3-206ENST00000536241 ZNF609O15014 1411 aa14.1□□□□□ -0.15
CDCA3-206ENST00000536241 UFL1O94874 794 aa14.1□□□□□ -0.15
CDCA3-206ENST00000536241 KLRK1P26718 216 aa14.1□□□□□ -0.15
CDCA3-206ENST00000536241 BCAMP50895 628 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms