RNA–Protein interactions for RNA: ENST00000536172.5

LMO3-213, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-213ENST00000536172 HUNKP57058 714 aa14.37□□□□□ -0.11
LMO3-213ENST00000536172 GPSM2P81274 684 aa14.37□□□□□ -0.11
LMO3-213ENST00000536172 C2orf69Q8N8R5 385 aa14.37□□□□□ -0.11
LMO3-213ENST00000536172 TBC1D16Q8TBP0 767 aa14.37□□□□□ -0.11
LMO3-213ENST00000536172 CCDC102AQ96A19 550 aa14.37□□□□□ -0.11
LMO3-213ENST00000536172 ADAMTS8Q9UP79 889 aa14.37□□□□□ -0.11
LMO3-213ENST00000536172 ZBTB12Q9Y330 459 aaPredicted RBP14.37□□□□□ -0.11
LMO3-213ENST00000536172 ZNF609O15014 1411 aa14.36□□□□□ -0.11
LMO3-213ENST00000536172 CCDC85CA6NKD9 419 aa14.36□□□□□ -0.11
LMO3-213ENST00000536172 G3V3G9 751 aa14.36□□□□□ -0.11
LMO3-213ENST00000536172 RIMBP2O15034 1052 aa14.36□□□□□ -0.11
LMO3-213ENST00000536172 VIL1P09327 827 aaKnown RBP14.36□□□□□ -0.11
LMO3-213ENST00000536172 RGS19P49795 217 aa14.36□□□□□ -0.11
LMO3-213ENST00000536172 GNAI1P63096 354 aa14.36□□□□□ -0.11
LMO3-213ENST00000536172 CCDC152Q4G0S7 254 aa14.36□□□□□ -0.11
LMO3-213ENST00000536172 DCAF8Q5TAQ9 597 aa14.36□□□□□ -0.11
LMO3-213ENST00000536172 SAMD7Q7Z3H4 446 aa14.36□□□□□ -0.11
LMO3-213ENST00000536172 CCDC191Q8NCU4 936 aa14.36□□□□□ -0.11
LMO3-213ENST00000536172 GBA2Q9HCG7 927 aaPredicted RBP14.36□□□□□ -0.11
LMO3-213ENST00000536172 MBIPQ9NS73 344 aa14.36□□□□□ -0.11
LMO3-213ENST00000536172 IFT57Q9NWB7 429 aa14.36□□□□□ -0.11
LMO3-213ENST00000536172 SCN9AQ15858 1988 aa14.36□□□□□ -0.11
LMO3-213ENST00000536172 SHTN1A0MZ66 631 aa14.35□□□□□ -0.11
LMO3-213ENST00000536172 DDX58O95786 925 aaKnown RBP14.35□□□□□ -0.11
LMO3-213ENST00000536172 ZNF853P0CG23 659 aa14.35□□□□□ -0.11
LMO3-213ENST00000536172 MLLT1Q03111 559 aaPredicted RBP14.35□□□□□ -0.11
LMO3-213ENST00000536172 DDX10Q13206 875 aaKnown RBP14.35□□□□□ -0.11
LMO3-213ENST00000536172 TBC1D10BQ4KMP7 808 aaPredicted RBP14.35□□□□□ -0.11
LMO3-213ENST00000536172 RGMBQ6NW40 437 aa14.35□□□□□ -0.11
LMO3-213ENST00000536172 SULF1Q8IWU6 871 aa14.35□□□□□ -0.11
LMO3-213ENST00000536172 SAGE1Q9NXZ1 904 aa14.35□□□□□ -0.11
LMO3-213ENST00000536172 ANKIB1Q9P2G1 1089 aa14.35□□□□□ -0.11
LMO3-213ENST00000536172 RTL9Q8NET4 1388 aa14.34□□□□□ -0.11
LMO3-213ENST00000536172 PDE8AO60658 829 aa14.34□□□□□ -0.11
LMO3-213ENST00000536172 PCCAP05165 728 aaPredicted RBP14.34□□□□□ -0.11
LMO3-213ENST00000536172 DOK7Q18PE1 504 aa14.34□□□□□ -0.11
LMO3-213ENST00000536172 KIF4BQ2VIQ3 1234 aa14.34□□□□□ -0.11
LMO3-213ENST00000536172 FAM161AQ3B820 660 aa14.34□□□□□ -0.11
LMO3-213ENST00000536172 RTL5Q5HYW3 569 aaPredicted RBP14.34□□□□□ -0.11
LMO3-213ENST00000536172 REM2Q8IYK8 340 aaPredicted RBP14.34□□□□□ -0.11
LMO3-213ENST00000536172 AGBL3Q8NEM8 1001 aa14.34□□□□□ -0.11
LMO3-213ENST00000536172 TSKSQ9UJT2 592 aa14.34□□□□□ -0.11
LMO3-213ENST00000536172 GGA1Q9UJY5 639 aa14.34□□□□□ -0.11
LMO3-213ENST00000536172 MYH3P11055 1940 aa14.34□□□□□ -0.11
LMO3-213ENST00000536172 UFL1O94874 794 aa14.33□□□□□ -0.12
LMO3-213ENST00000536172 ZNF428Q96B54 188 aa14.33□□□□□ -0.12
LMO3-213ENST00000536172 CWC25Q9NXE8 425 aaPredicted RBP14.33□□□□□ -0.12
LMO3-213ENST00000536172 FAM155AB1AL88 458 aaPredicted RBP14.32□□□□□ -0.12
LMO3-213ENST00000536172 EGFRP00533 1210 aa14.32□□□□□ -0.12
LMO3-213ENST00000536172 ZNF280AP59817 542 aaPredicted RBP14.32□□□□□ -0.12
LMO3-213ENST00000536172 RBM26Q5T8P6 1007 aaKnown RBP14.32□□□□□ -0.12
LMO3-213ENST00000536172 CCDC30Q5VVM6 783 aa14.32□□□□□ -0.12
LMO3-213ENST00000536172 MYD88Q99836 296 aa14.32□□□□□ -0.12
LMO3-213ENST00000536172 MCOLN1Q9GZU1 580 aa14.32□□□□□ -0.12
LMO3-213ENST00000536172 XDHP47989 1333 aa14.32□□□□□ -0.12
LMO3-213ENST00000536172 COL4A1P02462 1669 aa14.32□□□□□ -0.12
LMO3-213ENST00000536172 ZNF157P51786 506 aaPredicted RBP14.31□□□□□ -0.12
LMO3-213ENST00000536172 FKBP1BP68106 108 aa14.31□□□□□ -0.12
LMO3-213ENST00000536172 DGKZQ13574 1117 aa14.31□□□□□ -0.12
LMO3-213ENST00000536172 RSBN1LQ6PCB5 846 aaPredicted RBP14.31□□□□□ -0.12
LMO3-213ENST00000536172 PODNQ7Z5L7 613 aa14.31□□□□□ -0.12
LMO3-213ENST00000536172 ANKRD18AQ8IVF6 992 aa14.31□□□□□ -0.12
LMO3-213ENST00000536172 CDC5LQ99459 802 aaKnown RBP14.31□□□□□ -0.12
LMO3-213ENST00000536172 METTL22Q9BUU2 404 aaPredicted RBP14.31□□□□□ -0.12
LMO3-213ENST00000536172 SEC31BQ9NQW1 1179 aa14.31□□□□□ -0.12
LMO3-213ENST00000536172 KCNQ5Q9NR82 932 aa14.31□□□□□ -0.12
LMO3-213ENST00000536172 PITPNM2Q9BZ72 1349 aa14.31□□□□□ -0.12
LMO3-213ENST00000536172 ADM5C9JUS6 153 aa14.3□□□□□ -0.12
LMO3-213ENST00000536172 ATP2B4P23634 1241 aa14.3□□□□□ -0.12
LMO3-213ENST00000536172 MMP14P50281 582 aa14.3□□□□□ -0.12
LMO3-213ENST00000536172 PHAXQ9H814 394 aaKnown RBP14.3□□□□□ -0.12
LMO3-213ENST00000536172 GGA3Q9NZ52 723 aa14.3□□□□□ -0.12
LMO3-213ENST00000536172 PAPPA2Q9BXP8 1791 aa14.29□□□□□ -0.12
LMO3-213ENST00000536172 APAF1O14727 1248 aa14.29□□□□□ -0.12
LMO3-213ENST00000536172 SLC10A3P09131 477 aa14.29□□□□□ -0.12
LMO3-213ENST00000536172 USP17L8P0C7I0 530 aa14.29□□□□□ -0.12
LMO3-213ENST00000536172 PRKRIP1Q9H875 184 aaPredicted RBP14.29□□□□□ -0.12
LMO3-213ENST00000536172 USP17L3A6NCW0 530 aa14.28□□□□□ -0.12
LMO3-213ENST00000536172 USP17L4A6NCW7 530 aa14.28□□□□□ -0.12
LMO3-213ENST00000536172 ELL2O00472 640 aaPredicted RBP14.28□□□□□ -0.12
LMO3-213ENST00000536172 CACNA1FO60840 1977 aa14.28□□□□□ -0.12
LMO3-213ENST00000536172 KIF23Q02241 960 aaPredicted RBP14.28□□□□□ -0.12
LMO3-213ENST00000536172 NEXNQ0ZGT2 675 aa14.28□□□□□ -0.12
LMO3-213ENST00000536172 SCARF1Q14162 830 aa14.28□□□□□ -0.12
LMO3-213ENST00000536172 USP17L1Q7RTZ2 530 aa14.28□□□□□ -0.12
LMO3-213ENST00000536172 CDCA5Q96FF9 252 aa14.28□□□□□ -0.12
LMO3-213ENST00000536172 ZIC5Q96T25 663 aa14.28□□□□□ -0.12
LMO3-213ENST00000536172 GMLQ99445 158 aa14.28□□□□□ -0.12
LMO3-213ENST00000536172 MED23Q9ULK4 1368 aa14.27□□□□□ -0.12
LMO3-213ENST00000536172 MYO3BQ8WXR4 1341 aa14.27□□□□□ -0.12
LMO3-213ENST00000536172 CTSWP56202 376 aa14.27□□□□□ -0.13
LMO3-213ENST00000536172 ANGEL2Q5VTE6 544 aaKnown RBP14.27□□□□□ -0.13
LMO3-213ENST00000536172 DLK2Q6UY11 383 aa14.27□□□□□ -0.13
LMO3-213ENST00000536172 KSR2Q6VAB6 950 aa14.27□□□□□ -0.13
LMO3-213ENST00000536172 MYOZ2Q9NPC6 264 aa14.27□□□□□ -0.13
LMO3-213ENST00000536172 BSDC1Q9NW68 430 aaPredicted RBP14.27□□□□□ -0.13
LMO3-213ENST00000536172 RNF186Q9NXI6 227 aa14.27□□□□□ -0.13
LMO3-213ENST00000536172 MAP3K2Q9Y2U5 619 aa14.27□□□□□ -0.13
LMO3-213ENST00000536172 SPEF2Q9C093 1822 aa14.27□□□□□ -0.13
LMO3-213ENST00000536172 OGFOD1Q8N543 542 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms