RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 HOXD8P13378 290 aaPredicted RBP9.9□□□□□ -0.82
VBP1-203ENST00000535916 SOX18P35713 384 aa9.9□□□□□ -0.82
VBP1-203ENST00000535916 NLRP13Q86W25 1043 aa9.9□□□□□ -0.82
VBP1-203ENST00000535916 CLP1Q92989 425 aaKnown RBP9.9□□□□□ -0.82
VBP1-203ENST00000535916 ZMYND15Q9H091 742 aa9.9□□□□□ -0.82
VBP1-203ENST00000535916 GHRHP01286 108 aa9.89□□□□□ -0.83
VBP1-203ENST00000535916 GDF6Q6KF10 455 aaPredicted RBP9.89□□□□□ -0.83
VBP1-203ENST00000535916 WFDC12Q8WWY7 111 aa9.89□□□□□ -0.83
VBP1-203ENST00000535916 SLAIN2Q9P270 581 aa9.89□□□□□ -0.83
VBP1-203ENST00000535916 PTCD1O75127 700 aaKnown RBP9.88□□□□□ -0.83
VBP1-203ENST00000535916 NOS3P29474 1203 aa9.88□□□□□ -0.83
VBP1-203ENST00000535916 IREB2P48200 963 aaKnown RBP9.88□□□□□ -0.83
VBP1-203ENST00000535916 PBXIP1Q96AQ6 731 aa9.88□□□□□ -0.83
VBP1-203ENST00000535916 SCO2A0A1W2PP80 73 aa9.87□□□□□ -0.83
VBP1-203ENST00000535916 UBAP1LF5GYI3 381 aa9.87□□□□□ -0.83
VBP1-203ENST00000535916 ZAP70P43403 619 aa9.87□□□□□ -0.83
VBP1-203ENST00000535916 IGF2-ASQ6U949 168 aa9.87□□□□□ -0.83
VBP1-203ENST00000535916 PIK3R5Q8WYR1 880 aa9.87□□□□□ -0.83
VBP1-203ENST00000535916 DLL1O00548 723 aa9.86□□□□□ -0.83
VBP1-203ENST00000535916 ZBTB39O15060 712 aa9.86□□□□□ -0.83
VBP1-203ENST00000535916 IL22RA1Q8N6P7 574 aa9.86□□□□□ -0.83
VBP1-203ENST00000535916 CCDC97Q96F63 343 aaPredicted RBP9.86□□□□□ -0.83
VBP1-203ENST00000535916 RBSNQ9H1K0 784 aa9.86□□□□□ -0.83
VBP1-203ENST00000535916 TRIM33Q9UPN9 1127 aa9.86□□□□□ -0.83
VBP1-203ENST00000535916 COL13A1Q5TAT6 717 aaPredicted RBP9.85□□□□□ -0.83
VBP1-203ENST00000535916 OR13H1Q8NG92 308 aa9.85□□□□□ -0.83
VBP1-203ENST00000535916 GPR152Q8TDT2 470 aa9.85□□□□□ -0.83
VBP1-203ENST00000535916 FAM13BQ9NYF5 915 aa9.85□□□□□ -0.83
VBP1-203ENST00000535916 ATP2B4P23634 1241 aa9.84□□□□□ -0.83
VBP1-203ENST00000535916 MEGF10Q96KG7 1140 aa9.84□□□□□ -0.83
VBP1-203ENST00000535916 STIM2Q9P246 746 aa9.84□□□□□ -0.83
VBP1-203ENST00000535916 SEPT3Q9UH03 358 aa9.83□□□□□ -0.84
VBP1-203ENST00000535916 SERPINA10Q9UK55 444 aa9.82□□□□□ -0.84
VBP1-203ENST00000535916 ARID3CA6NKF2 412 aa9.81□□□□□ -0.84
VBP1-203ENST00000535916 ATP11AP98196 1134 aa9.81□□□□□ -0.84
VBP1-203ENST00000535916 HYAL2Q12891 473 aa9.81□□□□□ -0.84
VBP1-203ENST00000535916 SETDB1Q15047 1291 aa9.81□□□□□ -0.84
VBP1-203ENST00000535916 ABTB2Q8N961 1025 aa9.81□□□□□ -0.84
VBP1-203ENST00000535916 FNDC3AQ9Y2H6 1198 aaKnown RBP9.81□□□□□ -0.84
VBP1-203ENST00000535916 ALX3O95076 343 aa9.8□□□□□ -0.84
VBP1-203ENST00000535916 ARTNQ5T4W7 220 aa9.8□□□□□ -0.84
VBP1-203ENST00000535916 TTC39BQ5VTQ0 682 aaPredicted RBP9.8□□□□□ -0.84
VBP1-203ENST00000535916 AKTIPQ9H8T0 292 aa9.8□□□□□ -0.84
VBP1-203ENST00000535916 SRA1Q9HD15 236 aaKnown RBP9.8□□□□□ -0.84
VBP1-203ENST00000535916 MRPL18Q9H0U6 180 aaKnown RBP9.79□□□□□ -0.84
VBP1-203ENST00000535916 F8W735 103 aaPredicted RBP9.78□□□□□ -0.84
VBP1-203ENST00000535916 CYP2E1P05181 493 aaPredicted RBP9.78□□□□□ -0.84
VBP1-203ENST00000535916 SCNN1AP37088 669 aa9.78□□□□□ -0.84
VBP1-203ENST00000535916 CEP135Q66GS9 1140 aa9.78□□□□□ -0.84
VBP1-203ENST00000535916 ADAMTSL4Q6UY14 1074 aa9.78□□□□□ -0.84
VBP1-203ENST00000535916 ATCAYQ86WG3 371 aa9.78□□□□□ -0.84
VBP1-203ENST00000535916 KRTAP19-1Q8IUB9 90 aa9.78□□□□□ -0.84
VBP1-203ENST00000535916 SPACA7Q96KW9 195 aa9.78□□□□□ -0.84
VBP1-203ENST00000535916 LACRTQ9GZZ8 138 aa9.78□□□□□ -0.84
VBP1-203ENST00000535916 ZFP64Q9NPA5 681 aa9.78□□□□□ -0.84
VBP1-203ENST00000535916 ABI2Q9NYB9 513 aaPredicted RBP9.78□□□□□ -0.84
VBP1-203ENST00000535916 PPME1Q9Y570 386 aa9.78□□□□□ -0.84
VBP1-203ENST00000535916 MAP4K3Q8IVH8 894 aa9.77□□□□□ -0.85
VBP1-203ENST00000535916 CACTIN-AS1Q8N1I8 211 aa9.77□□□□□ -0.85
VBP1-203ENST00000535916 NUDT16Q96DE0 195 aaKnown RBP9.77□□□□□ -0.85
VBP1-203ENST00000535916 RASSF4Q9H2L5 321 aa9.77□□□□□ -0.85
VBP1-203ENST00000535916 LINC01387J3KSC0 135 aa9.76□□□□□ -0.85
VBP1-203ENST00000535916 KIF4AO95239 1232 aa9.76□□□□□ -0.85
VBP1-203ENST00000535916 DZIP1LQ8IYY4 767 aaKnown RBP9.76□□□□□ -0.85
VBP1-203ENST00000535916 TMEM130Q8N3G9 435 aa9.76□□□□□ -0.85
VBP1-203ENST00000535916 MUC3BQ9H195 1237 aa9.76□□□□□ -0.85
VBP1-203ENST00000535916 GOLGA2P5Q9HBQ8 144 aa9.76□□□□□ -0.85
VBP1-203ENST00000535916 TMEM63CQ9P1W3 806 aa9.76□□□□□ -0.85
VBP1-203ENST00000535916 SMNDC1O75940 238 aaKnown RBP eCLIP9.75□□□□□ -0.85
VBP1-203ENST00000535916 TXNDC11Q6PKC3 985 aa9.75□□□□□ -0.85
VBP1-203ENST00000535916 PRR23CQ6ZRP0 262 aa9.75□□□□□ -0.85
VBP1-203ENST00000535916 AGGF1Q8N302 714 aaeCLIP9.75□□□□□ -0.85
VBP1-203ENST00000535916 GALNT11Q8NCW6 608 aa9.75□□□□□ -0.85
VBP1-203ENST00000535916 ELP3Q9H9T3 547 aa9.75□□□□□ -0.85
VBP1-203ENST00000535916 CDC27P30260 824 aa9.74□□□□□ -0.85
VBP1-203ENST00000535916 LRP8Q14114 963 aa9.74□□□□□ -0.85
VBP1-203ENST00000535916 PDE12Q6L8Q7 609 aaKnown RBP9.74□□□□□ -0.85
VBP1-203ENST00000535916 HELQQ8TDG4 1101 aa9.74□□□□□ -0.85
VBP1-203ENST00000535916 DCAF11Q8TEB1 546 aa9.74□□□□□ -0.85
VBP1-203ENST00000535916 KANSL3Q9P2N6 904 aa9.74□□□□□ -0.85
VBP1-203ENST00000535916 CDC25BP30305 580 aa9.73□□□□□ -0.85
VBP1-203ENST00000535916 Q6ZS46 218 aa9.73□□□□□ -0.85
VBP1-203ENST00000535916 ZNF438Q7Z4V0 828 aa9.73□□□□□ -0.85
VBP1-203ENST00000535916 NCAPG2Q86XI2 1143 aa9.73□□□□□ -0.85
VBP1-203ENST00000535916 CEP120Q8N960 986 aa9.73□□□□□ -0.85
VBP1-203ENST00000535916 PBX4Q9BYU1 374 aa9.73□□□□□ -0.85
VBP1-203ENST00000535916 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.73□□□□□ -0.85
VBP1-203ENST00000535916 WISP1O95388 367 aa9.72□□□□□ -0.85
VBP1-203ENST00000535916 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.72□□□□□ -0.85
VBP1-203ENST00000535916 EDEM1Q92611 657 aa9.72□□□□□ -0.85
VBP1-203ENST00000535916 CARD10Q9BWT7 1032 aa9.72□□□□□ -0.85
VBP1-203ENST00000535916 CNTN3Q9P232 1028 aa9.72□□□□□ -0.85
VBP1-203ENST00000535916 GLB1P16278 677 aa9.71□□□□□ -0.86
VBP1-203ENST00000535916 DNM1Q05193 864 aaKnown RBP9.71□□□□□ -0.86
VBP1-203ENST00000535916 KCNK4Q9NYG8 393 aa9.71□□□□□ -0.86
VBP1-203ENST00000535916 A6NHS1 94 aa9.7□□□□□ -0.86
VBP1-203ENST00000535916 HYAL3O43820 417 aaPredicted RBP9.7□□□□□ -0.86
VBP1-203ENST00000535916 EPHA1P21709 976 aa9.7□□□□□ -0.86
VBP1-203ENST00000535916 CD68P34810 354 aaPredicted RBP9.7□□□□□ -0.86
VBP1-203ENST00000535916 CCDC82Q8N4S0 544 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms