RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 IFIT1P09914 478 aaKnown RBP15.97■□□□□ 0.15
VPS33B-202ENST00000535906 GJB2P29033 226 aa15.97■□□□□ 0.15
VPS33B-202ENST00000535906 GDPD2Q9HCC8 539 aa15.97■□□□□ 0.15
VPS33B-202ENST00000535906 ZSCAN22P10073 491 aaPredicted RBP15.96■□□□□ 0.15
VPS33B-202ENST00000535906 IFIT5Q13325 482 aaKnown RBP15.96■□□□□ 0.15
VPS33B-202ENST00000535906 FBXO3Q9UK99 471 aa15.96■□□□□ 0.15
VPS33B-202ENST00000535906 SH3TC1Q8TE82 1336 aa15.96■□□□□ 0.15
VPS33B-202ENST00000535906 TOB2Q14106 344 aaPredicted RBP15.96■□□□□ 0.15
VPS33B-202ENST00000535906 TMEM63CQ9P1W3 806 aa15.96■□□□□ 0.15
VPS33B-202ENST00000535906 DOT1LQ8TEK3 1739 aa15.95■□□□□ 0.14
VPS33B-202ENST00000535906 SPATA31A1Q5TZJ5 1347 aa15.95■□□□□ 0.14
VPS33B-202ENST00000535906 CDHR2Q9BYE9 1310 aa15.95■□□□□ 0.14
VPS33B-202ENST00000535906 CYP21A2P08686 494 aa15.95■□□□□ 0.14
VPS33B-202ENST00000535906 ADORA1P30542 326 aa15.95■□□□□ 0.14
VPS33B-202ENST00000535906 TTLL11Q8NHH1 800 aa15.95■□□□□ 0.14
VPS33B-202ENST00000535906 TBC1D2BQ9UPU7 963 aa15.95■□□□□ 0.14
VPS33B-202ENST00000535906 HSP90AB3PQ58FF7 597 aa15.95■□□□□ 0.14
VPS33B-202ENST00000535906 TAF7LQ5H9L4 462 aa15.95■□□□□ 0.14
VPS33B-202ENST00000535906 XAGE2Q96GT9 111 aa15.95■□□□□ 0.14
VPS33B-202ENST00000535906 ALDH8A1Q9H2A2 487 aaPredicted RBP15.95■□□□□ 0.14
VPS33B-202ENST00000535906 U3KPZ7 1027 aaPredicted RBP15.95■□□□□ 0.14
VPS33B-202ENST00000535906 NUP98P52948 1817 aa15.94■□□□□ 0.14
VPS33B-202ENST00000535906 GREM2Q9H772 168 aa15.94■□□□□ 0.14
VPS33B-202ENST00000535906 HELLSQ9NRZ9 838 aa15.94■□□□□ 0.14
VPS33B-202ENST00000535906 AKAP2Q9Y2D5 859 aa15.94■□□□□ 0.14
VPS33B-202ENST00000535906 ITGA6P23229 1130 aa15.94■□□□□ 0.14
VPS33B-202ENST00000535906 IL6STP40189 918 aaPredicted RBP15.94■□□□□ 0.14
VPS33B-202ENST00000535906 KRT32Q14532 448 aa15.94■□□□□ 0.14
VPS33B-202ENST00000535906 ANKRD1Q15327 319 aa15.94■□□□□ 0.14
VPS33B-202ENST00000535906 DDB1Q16531 1140 aa15.94■□□□□ 0.14
VPS33B-202ENST00000535906 ZMYM1Q5SVZ6 1142 aa15.94■□□□□ 0.14
VPS33B-202ENST00000535906 USP48Q86UV5 1035 aa15.94■□□□□ 0.14
VPS33B-202ENST00000535906 DZIP3Q86Y13 1208 aaKnown RBP15.94■□□□□ 0.14
VPS33B-202ENST00000535906 ANKRD36CQ5JPF3 1778 aa15.93■□□□□ 0.14
VPS33B-202ENST00000535906 F13A1P00488 732 aa15.93■□□□□ 0.14
VPS33B-202ENST00000535906 FKBP4Q02790 459 aaKnown RBP eCLIP15.93■□□□□ 0.14
VPS33B-202ENST00000535906 LRSAM1Q6UWE0 723 aa15.93■□□□□ 0.14
VPS33B-202ENST00000535906 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.93■□□□□ 0.14
VPS33B-202ENST00000535906 NEK1Q96PY6 1258 aa15.93■□□□□ 0.14
VPS33B-202ENST00000535906 RBSNQ9H1K0 784 aa15.93■□□□□ 0.14
VPS33B-202ENST00000535906 TRMT112Q9UI30 125 aaKnown RBP15.93■□□□□ 0.14
VPS33B-202ENST00000535906 LTBP4Q8N2S1 1624 aa15.93■□□□□ 0.14
VPS33B-202ENST00000535906 IRS4O14654 1257 aaPredicted RBP15.93■□□□□ 0.14
VPS33B-202ENST00000535906 GADD45BO75293 160 aaPredicted RBP15.93■□□□□ 0.14
VPS33B-202ENST00000535906 CTSWP56202 376 aa15.93■□□□□ 0.14
VPS33B-202ENST00000535906 CCDC158Q5M9N0 1113 aa15.93■□□□□ 0.14
VPS33B-202ENST00000535906 ACSBG1Q96GR2 724 aa15.93■□□□□ 0.14
VPS33B-202ENST00000535906 CDCA7Q9BWT1 371 aaPredicted RBP15.93■□□□□ 0.14
VPS33B-202ENST00000535906 RIPOR2Q9Y4F9 1068 aa15.93■□□□□ 0.14
VPS33B-202ENST00000535906 UBN2Q6ZU65 1347 aa15.92■□□□□ 0.14
VPS33B-202ENST00000535906 A0A0G2JS52 829 aa15.92■□□□□ 0.14
VPS33B-202ENST00000535906 ERVV-1B6SEH8 477 aa15.92■□□□□ 0.14
VPS33B-202ENST00000535906 SCARF1Q14162 830 aa15.92■□□□□ 0.14
VPS33B-202ENST00000535906 GORABQ5T7V8 394 aa15.92■□□□□ 0.14
VPS33B-202ENST00000535906 TICAM2Q86XR7 235 aa15.92■□□□□ 0.14
VPS33B-202ENST00000535906 MTMR6Q9Y217 621 aa15.92■□□□□ 0.14
VPS33B-202ENST00000535906 THRAP3Q9Y2W1 955 aaKnown RBP15.92■□□□□ 0.14
VPS33B-202ENST00000535906 NRAPQ86VF7 1730 aa15.92■□□□□ 0.14
VPS33B-202ENST00000535906 RNF113AO15541 343 aaKnown RBP15.92■□□□□ 0.14
VPS33B-202ENST00000535906 TTC39AQ5SRH9 613 aa15.92■□□□□ 0.14
VPS33B-202ENST00000535906 LDHAL6AQ6ZMR3 332 aa15.92■□□□□ 0.14
VPS33B-202ENST00000535906 CNPY2Q9Y2B0 182 aa15.92■□□□□ 0.14
VPS33B-202ENST00000535906 SPEF2Q9C093 1822 aa15.91■□□□□ 0.14
VPS33B-202ENST00000535906 MAST3O60307 1309 aa15.91■□□□□ 0.14
VPS33B-202ENST00000535906 PHLPP1O60346 1717 aa15.91■□□□□ 0.14
VPS33B-202ENST00000535906 RIC1Q4ADV7 1423 aa15.91■□□□□ 0.14
VPS33B-202ENST00000535906 STOX1Q6ZVD7 989 aa15.91■□□□□ 0.14
VPS33B-202ENST00000535906 MARCH10Q8NA82 808 aaPredicted RBP15.91■□□□□ 0.14
VPS33B-202ENST00000535906 DSCC1Q9BVC3 393 aa15.91■□□□□ 0.14
VPS33B-202ENST00000535906 MYH3P11055 1940 aa15.91■□□□□ 0.14
VPS33B-202ENST00000535906 NUTM2BA6NNL0 878 aaPredicted RBP15.9■□□□□ 0.14
VPS33B-202ENST00000535906 NUTM2EB1AL46 878 aaPredicted RBP15.9■□□□□ 0.14
VPS33B-202ENST00000535906 HSPD1P10809 573 aaKnown RBP15.9■□□□□ 0.14
VPS33B-202ENST00000535906 STK3Q13188 491 aa15.9■□□□□ 0.14
VPS33B-202ENST00000535906 NUTM2AQ8IVF1 878 aaPredicted RBP15.9■□□□□ 0.14
VPS33B-202ENST00000535906 ZNF34Q8IZ26 560 aa15.9■□□□□ 0.14
VPS33B-202ENST00000535906 A0A0G2JLW4 131 aa15.9■□□□□ 0.14
VPS33B-202ENST00000535906 SYCE3A1L190 88 aa15.9■□□□□ 0.14
VPS33B-202ENST00000535906 EIF5P55010 431 aaKnown RBP15.9■□□□□ 0.14
VPS33B-202ENST00000535906 METTL24Q5JXM2 366 aa15.9■□□□□ 0.14
VPS33B-202ENST00000535906 INTS5Q6P9B9 1019 aaKnown RBP15.9■□□□□ 0.14
VPS33B-202ENST00000535906 TMEM87AQ8NBN3 555 aa15.9■□□□□ 0.14
VPS33B-202ENST00000535906 OSBP2Q969R2 916 aa15.9■□□□□ 0.14
VPS33B-202ENST00000535906 ANKRD18BA2A2Z9 1011 aa15.89■□□□□ 0.13
VPS33B-202ENST00000535906 M0R2C6 588 aa15.89■□□□□ 0.13
VPS33B-202ENST00000535906 PI16Q6UXB8 463 aa15.89■□□□□ 0.13
VPS33B-202ENST00000535906 Q6ZUG5 572 aa15.89■□□□□ 0.13
VPS33B-202ENST00000535906 SLIT2O94813 1529 aa15.89■□□□□ 0.13
VPS33B-202ENST00000535906 VPS37CA5D8V6 355 aaPredicted RBP15.89■□□□□ 0.13
VPS33B-202ENST00000535906 PDE8AO60658 829 aa15.89■□□□□ 0.13
VPS33B-202ENST00000535906 ATP6V1AP38606 617 aa15.89■□□□□ 0.13
VPS33B-202ENST00000535906 ZAP70P43403 619 aa15.89■□□□□ 0.13
VPS33B-202ENST00000535906 ATP2B3Q16720 1220 aa15.89■□□□□ 0.13
VPS33B-202ENST00000535906 LARP1BQ659C4 914 aaKnown RBP15.88■□□□□ 0.13
VPS33B-202ENST00000535906 SYAP1Q96A49 352 aaPredicted RBP15.88■□□□□ 0.13
VPS33B-202ENST00000535906 PDLIM2Q96JY6 352 aa15.88■□□□□ 0.13
VPS33B-202ENST00000535906 LRRC2Q9BYS8 371 aa15.88■□□□□ 0.13
VPS33B-202ENST00000535906 CNNM1Q9NRU3 951 aa15.88■□□□□ 0.13
VPS33B-202ENST00000535906 ATP6V1DQ9Y5K8 247 aa15.88■□□□□ 0.13
VPS33B-202ENST00000535906 SPATA31A5Q5VU36 1347 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms