RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 ANKRD18AQ8IVF6 992 aa20.83■□□□□ 0.93
ATL3-202ENST00000535789 GRM8O00222 908 aa20.82■□□□□ 0.92
ATL3-202ENST00000535789 RIMBP2O15034 1052 aa20.82■□□□□ 0.92
ATL3-202ENST00000535789 UFL1O94874 794 aa20.82■□□□□ 0.92
ATL3-202ENST00000535789 ITGA6P23229 1130 aa20.82■□□□□ 0.92
ATL3-202ENST00000535789 WASHC4Q2M389 1173 aa20.82■□□□□ 0.92
ATL3-202ENST00000535789 KAZALD1Q96I82 304 aa20.82■□□□□ 0.92
ATL3-202ENST00000535789 CDC5LQ99459 802 aaKnown RBP20.82■□□□□ 0.92
ATL3-202ENST00000535789 C6orf229H3BNL8 230 aa20.81■□□□□ 0.92
ATL3-202ENST00000535789 ALDH1L1O75891 902 aa20.81■□□□□ 0.92
ATL3-202ENST00000535789 RAD17O75943 681 aa20.81■□□□□ 0.92
ATL3-202ENST00000535789 APLP1P51693 650 aa20.81■□□□□ 0.92
ATL3-202ENST00000535789 ALDH1L2Q3SY69 923 aa20.81■□□□□ 0.92
ATL3-202ENST00000535789 CHADLQ6NUI6 762 aa20.81■□□□□ 0.92
ATL3-202ENST00000535789 KCNQ5Q9NR82 932 aa20.81■□□□□ 0.92
ATL3-202ENST00000535789 MINPP1Q9UNW1 487 aa20.81■□□□□ 0.92
ATL3-202ENST00000535789 PTPRCP08575 1304 aa20.8■□□□□ 0.92
ATL3-202ENST00000535789 XDHP47989 1333 aa20.8■□□□□ 0.92
ATL3-202ENST00000535789 SHTN1A0MZ66 631 aa20.8■□□□□ 0.92
ATL3-202ENST00000535789 ECE2O60344 883 aa20.8■□□□□ 0.92
ATL3-202ENST00000535789 LDHDQ86WU2 507 aa20.8■□□□□ 0.92
ATL3-202ENST00000535789 SRCIN1Q9C0H9 1055 aa20.8■□□□□ 0.92
ATL3-202ENST00000535789 BSDC1Q9NW68 430 aaPredicted RBP20.8■□□□□ 0.92
ATL3-202ENST00000535789 UTYO14607 1347 aa20.79■□□□□ 0.92
ATL3-202ENST00000535789 NBPF7P0C2Y1 421 aaPredicted RBP20.79■□□□□ 0.92
ATL3-202ENST00000535789 GMPSP49915 693 aaPredicted RBP20.79■□□□□ 0.92
ATL3-202ENST00000535789 DOK7Q18PE1 504 aa20.79■□□□□ 0.92
ATL3-202ENST00000535789 EAPPQ56P03 285 aaPredicted RBP20.79■□□□□ 0.92
ATL3-202ENST00000535789 CIAPIN1Q6FI81 312 aa20.79■□□□□ 0.92
ATL3-202ENST00000535789 DNAJC5GQ8N7S2 189 aa20.79■□□□□ 0.92
ATL3-202ENST00000535789 SUCLG2Q96I99 432 aa20.79■□□□□ 0.92
ATL3-202ENST00000535789 ANKIB1Q9P2G1 1089 aa20.79■□□□□ 0.92
ATL3-202ENST00000535789 GGA1Q9UJY5 639 aa20.79■□□□□ 0.92
ATL3-202ENST00000535789 PASKQ96RG2 1323 aa20.78■□□□□ 0.92
ATL3-202ENST00000535789 SMC4Q9NTJ3 1288 aa20.78■□□□□ 0.92
ATL3-202ENST00000535789 GPRC5DQ9NZD1 345 aa20.78■□□□□ 0.92
ATL3-202ENST00000535789 ARAP2Q8WZ64 1704 aa20.78■□□□□ 0.92
ATL3-202ENST00000535789 MED23Q9ULK4 1368 aa20.77■□□□□ 0.92
ATL3-202ENST00000535789 PSMD14O00487 310 aa20.77■□□□□ 0.92
ATL3-202ENST00000535789 KLRK1P26718 216 aa20.77■□□□□ 0.92
ATL3-202ENST00000535789 EYA3Q99504 573 aa20.77■□□□□ 0.92
ATL3-202ENST00000535789 ITGBL1O95965 494 aaPredicted RBP20.76■□□□□ 0.91
ATL3-202ENST00000535789 LMBR1LQ6UX01 489 aa20.76■□□□□ 0.91
ATL3-202ENST00000535789 ZBTB12Q9Y330 459 aaPredicted RBP20.76■□□□□ 0.91
ATL3-202ENST00000535789 ZNF609O15014 1411 aa20.76■□□□□ 0.91
ATL3-202ENST00000535789 IRS2Q9Y4H2 1338 aa20.76■□□□□ 0.91
ATL3-202ENST00000535789 CT47B1P0C2W7 299 aaPredicted RBP20.75■□□□□ 0.91
ATL3-202ENST00000535789 CCT4P50991 539 aaKnown RBP20.75■□□□□ 0.91
ATL3-202ENST00000535789 RARSP54136 660 aaKnown RBP20.75■□□□□ 0.91
ATL3-202ENST00000535789 MAP1SQ66K74 1059 aaPredicted RBP20.75■□□□□ 0.91
ATL3-202ENST00000535789 TXNRD3Q86VQ6 643 aa20.75■□□□□ 0.91
ATL3-202ENST00000535789 ZNF594Q96JF6 807 aaPredicted RBP20.75■□□□□ 0.91
ATL3-202ENST00000535789 C9orf78Q9NZ63 289 aaPredicted RBP20.75■□□□□ 0.91
ATL3-202ENST00000535789 MYH13Q9UKX3 1938 aa20.74■□□□□ 0.91
ATL3-202ENST00000535789 ECM29Q5VYK3 1845 aa20.74■□□□□ 0.91
ATL3-202ENST00000535789 ATP2B4P23634 1241 aa20.74■□□□□ 0.91
ATL3-202ENST00000535789 LMOD1P29536 600 aaPredicted RBP20.74■□□□□ 0.91
ATL3-202ENST00000535789 IGHMBP2P38935 993 aaKnown RBP20.74■□□□□ 0.91
ATL3-202ENST00000535789 BRPF1P55201 1214 aaPredicted RBP20.74■□□□□ 0.91
ATL3-202ENST00000535789 HNRNPUQ00839 825 aaKnown RBP eCLIP20.74■□□□□ 0.91
ATL3-202ENST00000535789 PNMA8AQ86V59 439 aaPredicted RBP20.74■□□□□ 0.91
ATL3-202ENST00000535789 ANKRD44Q8N8A2 993 aa20.74■□□□□ 0.91
ATL3-202ENST00000535789 TRPM4Q8TD43 1214 aa20.74■□□□□ 0.91
ATL3-202ENST00000535789 ANKRD18BA2A2Z9 1011 aa20.73■□□□□ 0.91
ATL3-202ENST00000535789 SNAP23O00161 211 aa20.73■□□□□ 0.91
ATL3-202ENST00000535789 CHRNDQ07001 517 aa20.73■□□□□ 0.91
ATL3-202ENST00000535789 ZC3H12CQ9C0D7 883 aaKnown RBP20.73■□□□□ 0.91
ATL3-202ENST00000535789 EGFRP00533 1210 aa20.72■□□□□ 0.91
ATL3-202ENST00000535789 HIRAP54198 1017 aaPredicted RBP20.72■□□□□ 0.91
ATL3-202ENST00000535789 FMR1Q06787 632 aaKnown RBP eCLIP20.72■□□□□ 0.91
ATL3-202ENST00000535789 TNIP1Q15025 636 aa20.72■□□□□ 0.91
ATL3-202ENST00000535789 RABL6Q3YEC7 729 aaPredicted RBP20.72■□□□□ 0.91
ATL3-202ENST00000535789 USP44Q9H0E7 712 aa20.72■□□□□ 0.91
ATL3-202ENST00000535789 BICC1Q9H694 974 aaKnown RBP20.72■□□□□ 0.91
ATL3-202ENST00000535789 ADARB2Q9NS39 739 aaKnown RBP20.72■□□□□ 0.91
ATL3-202ENST00000535789 NOB1Q9ULX3 412 aaKnown RBP20.72■□□□□ 0.91
ATL3-202ENST00000535789 CHMP3Q9Y3E7 222 aa20.72■□□□□ 0.91
ATL3-202ENST00000535789 USP50Q70EL3 339 aaPredicted RBP20.71■□□□□ 0.91
ATL3-202ENST00000535789 CLEC11AQ9Y240 323 aa20.71■□□□□ 0.91
ATL3-202ENST00000535789 IFIT5Q13325 482 aaKnown RBP20.7■□□□□ 0.9
ATL3-202ENST00000535789 MICALL2Q8IY33 904 aa20.7■□□□□ 0.9
ATL3-202ENST00000535789 MPHOSPH8Q99549 860 aa20.7■□□□□ 0.9
ATL3-202ENST00000535789 TNNQ9UQP3 1299 aa20.7■□□□□ 0.9
ATL3-202ENST00000535789 THSD7BQ9C0I4 1608 aa20.7■□□□□ 0.9
ATL3-202ENST00000535789 TAF5LO75529 589 aa20.69■□□□□ 0.9
ATL3-202ENST00000535789 VIL1P09327 827 aaKnown RBP20.69■□□□□ 0.9
ATL3-202ENST00000535789 CNTROBQ8N137 903 aa20.69■□□□□ 0.9
ATL3-202ENST00000535789 HELBQ8NG08 1087 aaPredicted RBP20.69■□□□□ 0.9
ATL3-202ENST00000535789 KLRG1Q96E93 195 aa20.69■□□□□ 0.9
ATL3-202ENST00000535789 CNOT7Q9UIV1 285 aaKnown RBP20.69■□□□□ 0.9
ATL3-202ENST00000535789 ZNF804BA4D1E1 1349 aa20.69■□□□□ 0.9
ATL3-202ENST00000535789 DPF2Q92785 391 aa20.68■□□□□ 0.9
ATL3-202ENST00000535789 PUS3Q9BZE2 481 aaKnown RBP20.68■□□□□ 0.9
ATL3-202ENST00000535789 LEMD3Q9Y2U8 911 aa20.68■□□□□ 0.9
ATL3-202ENST00000535789 SAMD7Q7Z3H4 446 aa20.67■□□□□ 0.9
ATL3-202ENST00000535789 GMLQ99445 158 aa20.67■□□□□ 0.9
ATL3-202ENST00000535789 ANKRD2Q9GZV1 360 aa20.67■□□□□ 0.9
ATL3-202ENST00000535789 TRAF5O00463 557 aa20.66■□□□□ 0.9
ATL3-202ENST00000535789 BCAR3O75815 825 aa20.66■□□□□ 0.9
ATL3-202ENST00000535789 CCDC57Q2TAC2 916 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms