RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 BECN1Q14457 450 aa25.49■■□□□ 1.67
PDXDC1-205ENST00000535621 LDHAL6AQ6ZMR3 332 aa25.49■■□□□ 1.67
PDXDC1-205ENST00000535621 A0A1B0GUL7 405 aa25.48■■□□□ 1.67
PDXDC1-205ENST00000535621 NEUROD6Q96NK8 337 aa25.48■■□□□ 1.67
PDXDC1-205ENST00000535621 IL25Q9H293 177 aa25.48■■□□□ 1.67
PDXDC1-205ENST00000535621 TM4SF1P30408 202 aa25.47■■□□□ 1.67
PDXDC1-205ENST00000535621 SLC15A2Q16348 729 aa25.47■■□□□ 1.67
PDXDC1-205ENST00000535621 RIC1Q4ADV7 1423 aa25.47■■□□□ 1.67
PDXDC1-205ENST00000535621 NYXQ9GZU5 481 aa25.47■■□□□ 1.67
PDXDC1-205ENST00000535621 MSL1Q68DK7 614 aa25.47■■□□□ 1.67
PDXDC1-205ENST00000535621 ERICH6Q7L0X2 663 aa25.47■■□□□ 1.67
PDXDC1-205ENST00000535621 LRP5O75197 1615 aa25.47■■□□□ 1.67
PDXDC1-205ENST00000535621 TPTE2Q6XPS3 522 aa25.46■■□□□ 1.67
PDXDC1-205ENST00000535621 TBC1D2Q9BYX2 928 aa25.46■■□□□ 1.67
PDXDC1-205ENST00000535621 PDGFDQ9GZP0 370 aaPredicted RBP25.46■■□□□ 1.67
PDXDC1-205ENST00000535621 AKAP2Q9Y2D5 859 aa25.46■■□□□ 1.67
PDXDC1-205ENST00000535621 SGSM2O43147 1006 aa25.45■■□□□ 1.66
PDXDC1-205ENST00000535621 CCDC152Q4G0S7 254 aa25.45■■□□□ 1.66
PDXDC1-205ENST00000535621 SLC10A5Q5PT55 438 aa25.45■■□□□ 1.66
PDXDC1-205ENST00000535621 CNNM1Q9NRU3 951 aa25.45■■□□□ 1.66
PDXDC1-205ENST00000535621 RTL9Q8NET4 1388 aa25.45■■□□□ 1.66
PDXDC1-205ENST00000535621 NPHP1O15259 732 aa25.44■■□□□ 1.66
PDXDC1-205ENST00000535621 HMGB2P26583 209 aaKnown RBP25.44■■□□□ 1.66
PDXDC1-205ENST00000535621 PRR5LQ6MZQ0 368 aa25.44■■□□□ 1.66
PDXDC1-205ENST00000535621 SERPINB2P05120 415 aa25.44■■□□□ 1.66
PDXDC1-205ENST00000535621 METTL24Q5JXM2 366 aa25.44■■□□□ 1.66
PDXDC1-205ENST00000535621 CNBD1Q8NA66 436 aa25.44■■□□□ 1.66
PDXDC1-205ENST00000535621 HAUS7Q99871 368 aa25.44■■□□□ 1.66
PDXDC1-205ENST00000535621 ANO2Q9NQ90 1003 aa25.44■■□□□ 1.66
PDXDC1-205ENST00000535621 STK32BQ9NY57 414 aa25.44■■□□□ 1.66
PDXDC1-205ENST00000535621 POLRMTO00411 1230 aaKnown RBP25.43■■□□□ 1.66
PDXDC1-205ENST00000535621 CWC27Q6UX04 472 aaKnown RBP25.43■■□□□ 1.66
PDXDC1-205ENST00000535621 DIAPH3Q9NSV4 1193 aa25.43■■□□□ 1.66
PDXDC1-205ENST00000535621 QSER1Q2KHR3 1735 aa25.43■■□□□ 1.66
PDXDC1-205ENST00000535621 VGLL2Q8N8G2 317 aa25.42■■□□□ 1.66
PDXDC1-205ENST00000535621 EPB41L2O43491 1005 aaKnown RBP25.41■■□□□ 1.66
PDXDC1-205ENST00000535621 EDC3Q96F86 508 aaKnown RBP25.41■■□□□ 1.66
PDXDC1-205ENST00000535621 HIP1O00291 1037 aa25.41■■□□□ 1.66
PDXDC1-205ENST00000535621 SF3B3Q15393 1217 aaKnown RBP25.41■■□□□ 1.66
PDXDC1-205ENST00000535621 FLAD1Q8NFF5 587 aa25.41■■□□□ 1.66
PDXDC1-205ENST00000535621 RUFY2Q8WXA3 655 aa25.4■■□□□ 1.66
PDXDC1-205ENST00000535621 SNX21Q969T3 373 aa25.4■■□□□ 1.66
PDXDC1-205ENST00000535621 XAGE2Q96GT9 111 aa25.4■■□□□ 1.66
PDXDC1-205ENST00000535621 FSD1Q9BTV5 496 aa25.4■■□□□ 1.66
PDXDC1-205ENST00000535621 NDUFB9Q9Y6M9 179 aa25.4■■□□□ 1.66
PDXDC1-205ENST00000535621 ANKRD31Q8N7Z5 1873 aa25.39■■□□□ 1.66
PDXDC1-205ENST00000535621 ADORA1P30542 326 aa25.39■■□□□ 1.66
PDXDC1-205ENST00000535621 DNAJC2Q99543 621 aaKnown RBP25.39■■□□□ 1.66
PDXDC1-205ENST00000535621 PDE8BO95263 885 aa25.39■■□□□ 1.65
PDXDC1-205ENST00000535621 ATP2B3Q16720 1220 aa25.39■■□□□ 1.65
PDXDC1-205ENST00000535621 NLRP3Q96P20 1036 aa25.39■■□□□ 1.65
PDXDC1-205ENST00000535621 MROH5Q6ZUA9 1318 aa25.39■■□□□ 1.65
PDXDC1-205ENST00000535621 HELBQ8NG08 1087 aaPredicted RBP25.38■■□□□ 1.65
PDXDC1-205ENST00000535621 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.38■■□□□ 1.65
PDXDC1-205ENST00000535621 MMP10P09238 476 aa25.37■■□□□ 1.65
PDXDC1-205ENST00000535621 RABEP1Q15276 862 aa25.37■■□□□ 1.65
PDXDC1-205ENST00000535621 SLC51AQ86UW1 340 aa25.37■■□□□ 1.65
PDXDC1-205ENST00000535621 NLGN1Q8N2Q7 840 aa25.37■■□□□ 1.65
PDXDC1-205ENST00000535621 CELF1Q92879 486 aaKnown RBP25.37■■□□□ 1.65
PDXDC1-205ENST00000535621 MPHOSPH8Q99549 860 aa25.37■■□□□ 1.65
PDXDC1-205ENST00000535621 A0A1B0GUL6 1792 aa25.37■■□□□ 1.65
PDXDC1-205ENST00000535621 LSG1Q9H089 658 aaKnown RBP25.37■■□□□ 1.65
PDXDC1-205ENST00000535621 NRXN2Q9P2S2 1712 aa25.37■■□□□ 1.65
PDXDC1-205ENST00000535621 CCDC158Q5M9N0 1113 aa25.36■■□□□ 1.65
PDXDC1-205ENST00000535621 FAM227BQ96M60 508 aa25.36■■□□□ 1.65
PDXDC1-205ENST00000535621 RFX7Q2KHR2 1363 aa25.36■■□□□ 1.65
PDXDC1-205ENST00000535621 RAD50Q92878 1312 aa25.36■■□□□ 1.65
PDXDC1-205ENST00000535621 IGHMBP2P38935 993 aaKnown RBP25.36■■□□□ 1.65
PDXDC1-205ENST00000535621 NMIQ13287 307 aaPredicted RBP25.36■■□□□ 1.65
PDXDC1-205ENST00000535621 GORABQ5T7V8 394 aa25.36■■□□□ 1.65
PDXDC1-205ENST00000535621 SNAP23O00161 211 aa25.35■■□□□ 1.65
PDXDC1-205ENST00000535621 IFIT1P09914 478 aaKnown RBP25.35■■□□□ 1.65
PDXDC1-205ENST00000535621 MCCP23508 829 aa25.35■■□□□ 1.65
PDXDC1-205ENST00000535621 HSCBQ8IWL3 235 aa25.35■■□□□ 1.65
PDXDC1-205ENST00000535621 DDX46Q7L014 1031 aaKnown RBP25.34■■□□□ 1.65
PDXDC1-205ENST00000535621 SNRKQ9NRH2 765 aa25.34■■□□□ 1.65
PDXDC1-205ENST00000535621 PAG1Q9NWQ8 432 aa25.34■■□□□ 1.65
PDXDC1-205ENST00000535621 TAF5LO75529 589 aa25.34■■□□□ 1.65
PDXDC1-205ENST00000535621 KIAA1211Q6ZU35 1233 aa25.34■■□□□ 1.65
PDXDC1-205ENST00000535621 KBTBD3Q8NAB2 608 aa25.34■■□□□ 1.65
PDXDC1-205ENST00000535621 CDC5LQ99459 802 aaKnown RBP25.34■■□□□ 1.65
PDXDC1-205ENST00000535621 A0A0D9SFI3 127 aa25.33■■□□□ 1.65
PDXDC1-205ENST00000535621 CD2BP2O95400 341 aaKnown RBP25.33■■□□□ 1.65
PDXDC1-205ENST00000535621 ANAPC15P60006 121 aa25.33■■□□□ 1.65
PDXDC1-205ENST00000535621 ST5P78524 1137 aa25.33■■□□□ 1.65
PDXDC1-205ENST00000535621 PUM3Q15397 648 aaKnown RBP25.33■■□□□ 1.65
PDXDC1-205ENST00000535621 TTC39AQ5SRH9 613 aa25.33■■□□□ 1.65
PDXDC1-205ENST00000535621 CCDC125Q86Z20 511 aa25.33■■□□□ 1.65
PDXDC1-205ENST00000535621 PALD1Q9ULE6 856 aa25.33■■□□□ 1.65
PDXDC1-205ENST00000535621 GOLIM4O00461 696 aa25.32■■□□□ 1.64
PDXDC1-205ENST00000535621 FGFR2P21802 821 aa25.32■■□□□ 1.64
PDXDC1-205ENST00000535621 HSPA4P34932 840 aa25.32■■□□□ 1.64
PDXDC1-205ENST00000535621 IL17RAQ96F46 866 aa25.32■■□□□ 1.64
PDXDC1-205ENST00000535621 LPIN2Q92539 896 aa25.32■■□□□ 1.64
PDXDC1-205ENST00000535621 WTIPA6NIX2 430 aaPredicted RBP25.31■■□□□ 1.64
PDXDC1-205ENST00000535621 ANKRD18AQ8IVF6 992 aa25.31■■□□□ 1.64
PDXDC1-205ENST00000535621 UPF1Q92900 1129 aaKnown RBP eCLIP25.31■■□□□ 1.643e-8■■■■□ 24.6
PDXDC1-205ENST00000535621 TICAM2Q86XR7 235 aa25.3■■□□□ 1.64
PDXDC1-205ENST00000535621 MED23Q9ULK4 1368 aa25.3■■□□□ 1.64
PDXDC1-205ENST00000535621 ARAP2Q8WZ64 1704 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms