RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 RAPGEF4Q8WZA2 1011 aa18.55■□□□□ 0.56
MCF2L-232ENST00000535094 USP6P35125 1406 aa18.55■□□□□ 0.56
MCF2L-232ENST00000535094 TIMM10P62072 90 aa18.55■□□□□ 0.56
MCF2L-232ENST00000535094 ZSCAN16Q9H4T2 348 aaPredicted RBP18.55■□□□□ 0.56
MCF2L-232ENST00000535094 HMG20BQ9P0W2 317 aa18.55■□□□□ 0.56
MCF2L-232ENST00000535094 U3KPZ7 1027 aaPredicted RBP18.55■□□□□ 0.56
MCF2L-232ENST00000535094 SLU7O95391 586 aaKnown RBP18.54■□□□□ 0.56
MCF2L-232ENST00000535094 EPB41L2O43491 1005 aaKnown RBP18.54■□□□□ 0.56
MCF2L-232ENST00000535094 ALDH1L1O75891 902 aa18.54■□□□□ 0.56
MCF2L-232ENST00000535094 SLC3A2P08195 630 aaKnown RBP18.54■□□□□ 0.56
MCF2L-232ENST00000535094 UTP14CQ5TAP6 766 aaKnown RBP18.54■□□□□ 0.56
MCF2L-232ENST00000535094 TDRD7Q8NHU6 1098 aaKnown RBP18.54■□□□□ 0.56
MCF2L-232ENST00000535094 C8orf76Q96K31 380 aa18.54■□□□□ 0.56
MCF2L-232ENST00000535094 SCRN1Q12765 414 aa18.53■□□□□ 0.56
MCF2L-232ENST00000535094 ZNF397Q8NF99 534 aaPredicted RBP18.53■□□□□ 0.56
MCF2L-232ENST00000535094 ST7Q9NRC1 585 aa18.53■□□□□ 0.56
MCF2L-232ENST00000535094 TAF5LO75529 589 aa18.53■□□□□ 0.56
MCF2L-232ENST00000535094 BBXQ8WY36 941 aaPredicted RBP18.53■□□□□ 0.56
MCF2L-232ENST00000535094 CCDC66A2RUB6 948 aa18.53■□□□□ 0.56
MCF2L-232ENST00000535094 ZBTB22O15209 634 aa18.53■□□□□ 0.56
MCF2L-232ENST00000535094 MCMDC2Q4G0Z9 681 aa18.53■□□□□ 0.56
MCF2L-232ENST00000535094 PHF8Q9UPP1 1060 aa18.53■□□□□ 0.56
MCF2L-232ENST00000535094 A2ML1A8K2U0 1454 aa18.52■□□□□ 0.56
MCF2L-232ENST00000535094 CTAGE5O15320 804 aa18.52■□□□□ 0.56
MCF2L-232ENST00000535094 ARHGAP29Q52LW3 1261 aa18.52■□□□□ 0.56
MCF2L-232ENST00000535094 CCDC82Q8N4S0 544 aa18.52■□□□□ 0.56
MCF2L-232ENST00000535094 CYP21A2P08686 494 aa18.52■□□□□ 0.56
MCF2L-232ENST00000535094 VGLL3A8MV65 326 aa18.52■□□□□ 0.55
MCF2L-232ENST00000535094 RXRAP19793 462 aa18.52■□□□□ 0.55
MCF2L-232ENST00000535094 SKIDA1Q1XH10 827 aa18.52■□□□□ 0.55
MCF2L-232ENST00000535094 MRPS27Q92552 414 aaKnown RBP18.52■□□□□ 0.55
MCF2L-232ENST00000535094 PDIA4P13667 645 aaKnown RBP18.51■□□□□ 0.55
MCF2L-232ENST00000535094 TNNT3P45378 269 aaPredicted RBP18.51■□□□□ 0.55
MCF2L-232ENST00000535094 GOLGA8FQ08AF8 430 aa18.51■□□□□ 0.55
MCF2L-232ENST00000535094 GOLGA8DPQ0D2H9 430 aa18.51■□□□□ 0.55
MCF2L-232ENST00000535094 NFXL1Q6ZNB6 911 aa18.51■□□□□ 0.55
MCF2L-232ENST00000535094 GJB4Q9NTQ9 266 aa18.51■□□□□ 0.55
MCF2L-232ENST00000535094 ARGLU1Q9NWB6 273 aaPredicted RBP18.51■□□□□ 0.55
MCF2L-232ENST00000535094 SIGLEC1Q9BZZ2 1709 aa18.51■□□□□ 0.55
MCF2L-232ENST00000535094 KCNA6P17658 529 aa18.51■□□□□ 0.55
MCF2L-232ENST00000535094 LMBR1LQ6UX01 489 aa18.51■□□□□ 0.55
MCF2L-232ENST00000535094 ORC3Q9UBD5 711 aaPredicted RBP18.51■□□□□ 0.55
MCF2L-232ENST00000535094 TNRQ92752 1358 aa18.51■□□□□ 0.55
MCF2L-232ENST00000535094 TEX35Q5T0J7 233 aa18.51■□□□□ 0.55
MCF2L-232ENST00000535094 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.51■□□□□ 0.55
MCF2L-232ENST00000535094 XPO4Q9C0E2 1151 aaKnown RBP18.51■□□□□ 0.55
MCF2L-232ENST00000535094 CTNNA3Q9UI47 895 aa18.51■□□□□ 0.55
MCF2L-232ENST00000535094 GOLGA8BA8MQT2 603 aa18.5■□□□□ 0.55
MCF2L-232ENST00000535094 NEMFO60524 1076 aa18.5■□□□□ 0.55
MCF2L-232ENST00000535094 MYO5BQ9ULV0 1848 aa18.5■□□□□ 0.55
MCF2L-232ENST00000535094 ELP1O95163 1332 aa18.5■□□□□ 0.55
MCF2L-232ENST00000535094 GPHNQ9NQX3 736 aaPredicted RBP18.5■□□□□ 0.55
MCF2L-232ENST00000535094 KIF20BQ96Q89 1820 aa18.5■□□□□ 0.55
MCF2L-232ENST00000535094 GIGYF1O75420 1035 aaPredicted RBP18.5■□□□□ 0.55
MCF2L-232ENST00000535094 FAM160A1Q05DH4 1040 aa18.5■□□□□ 0.55
MCF2L-232ENST00000535094 PLA2G4DQ86XP0 818 aa18.5■□□□□ 0.55
MCF2L-232ENST00000535094 DBNLQ9UJU6 430 aaKnown RBP18.5■□□□□ 0.55
MCF2L-232ENST00000535094 RNMTO43148 476 aaKnown RBP18.49■□□□□ 0.55
MCF2L-232ENST00000535094 FBXO38Q6PIJ6 1188 aa18.49■□□□□ 0.55
MCF2L-232ENST00000535094 TMCO3Q6UWJ1 677 aa18.49■□□□□ 0.55
MCF2L-232ENST00000535094 ANKRD13DQ6ZTN6 518 aa18.49■□□□□ 0.55
MCF2L-232ENST00000535094 NFATC2IPQ8NCF5 419 aa18.49■□□□□ 0.55
MCF2L-232ENST00000535094 ANKRD7Q92527 254 aa18.49■□□□□ 0.55
MCF2L-232ENST00000535094 NOL10Q9BSC4 688 aaKnown RBP18.49■□□□□ 0.55
MCF2L-232ENST00000535094 IFIT1P09914 478 aaKnown RBP18.49■□□□□ 0.55
MCF2L-232ENST00000535094 AKAP4Q5JQC9 854 aa18.49■□□□□ 0.55
MCF2L-232ENST00000535094 DHX32Q7L7V1 743 aaKnown RBP18.49■□□□□ 0.55
MCF2L-232ENST00000535094 GOLPH3LQ9H4A5 285 aa18.49■□□□□ 0.55
MCF2L-232ENST00000535094 RESTQ13127 1097 aa18.49■□□□□ 0.55
MCF2L-232ENST00000535094 KMT5BQ4FZB7 885 aa18.49■□□□□ 0.55
MCF2L-232ENST00000535094 EPHA10Q5JZY3 1008 aa18.49■□□□□ 0.55
MCF2L-232ENST00000535094 DLG5Q8TDM6 1919 aa18.48■□□□□ 0.55
MCF2L-232ENST00000535094 TRDNQ13061 729 aa18.48■□□□□ 0.55
MCF2L-232ENST00000535094 KLF18A0A0U1RQI7 1052 aa18.47■□□□□ 0.55
MCF2L-232ENST00000535094 CAVIN2O95810 425 aa18.47■□□□□ 0.55
MCF2L-232ENST00000535094 GSDMDP57764 484 aa18.47■□□□□ 0.55
MCF2L-232ENST00000535094 DPCR1Q3MIW9 517 aa18.47■□□□□ 0.55
MCF2L-232ENST00000535094 TNNI3KQ59H18 835 aa18.47■□□□□ 0.55
MCF2L-232ENST00000535094 OLFM4Q6UX06 510 aa18.47■□□□□ 0.55
MCF2L-232ENST00000535094 FPGT-TNNI3KV9GXZ4 949 aa18.47■□□□□ 0.55
MCF2L-232ENST00000535094 UTP14AQ9BVJ6 771 aaKnown RBP18.47■□□□□ 0.55
MCF2L-232ENST00000535094 ERO1AQ96HE7 468 aa18.47■□□□□ 0.55
MCF2L-232ENST00000535094 CCDC34Q96HJ3 373 aa18.47■□□□□ 0.55
MCF2L-232ENST00000535094 ANKRD24Q8TF21 1146 aa18.46■□□□□ 0.55
MCF2L-232ENST00000535094 NDUFA8P51970 172 aa18.46■□□□□ 0.55
MCF2L-232ENST00000535094 UBASH3AP57075 661 aa18.46■□□□□ 0.55
MCF2L-232ENST00000535094 CPLX3Q8WVH0 158 aa18.46■□□□□ 0.55
MCF2L-232ENST00000535094 TRIM29Q14134 588 aa18.46■□□□□ 0.55
MCF2L-232ENST00000535094 ZNF594Q96JF6 807 aaPredicted RBP18.46■□□□□ 0.55
MCF2L-232ENST00000535094 ZBTB3Q9H5J0 574 aa18.46■□□□□ 0.55
MCF2L-232ENST00000535094 PCDHA7Q9UN72 937 aa18.46■□□□□ 0.55
MCF2L-232ENST00000535094 ADCY9O60503 1353 aa18.46■□□□□ 0.55
MCF2L-232ENST00000535094 PES1O00541 588 aaKnown RBP18.45■□□□□ 0.54
MCF2L-232ENST00000535094 CTIFO43310 598 aaKnown RBP18.45■□□□□ 0.54
MCF2L-232ENST00000535094 NEO1Q92859 1461 aa18.45■□□□□ 0.54
MCF2L-232ENST00000535094 SPTLC2O15270 562 aa18.45■□□□□ 0.54
MCF2L-232ENST00000535094 BMS1Q14692 1282 aaKnown RBP18.45■□□□□ 0.54
MCF2L-232ENST00000535094 RRP12Q5JTH9 1297 aaKnown RBP18.45■□□□□ 0.54
MCF2L-232ENST00000535094 DDX21Q9NR30 783 aaKnown RBP eCLIP18.45■□□□□ 0.54
MCF2L-232ENST00000535094 A0A0G2JLW4 131 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms