RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 BECN1Q14457 450 aa6.25□□□□□ -1.41
SNHG1-201ENST00000535076 MTFR1Q15390 333 aa6.25□□□□□ -1.41
SNHG1-201ENST00000535076 EML3Q32P44 896 aa6.25□□□□□ -1.41
SNHG1-201ENST00000535076 TBC1D10BQ4KMP7 808 aaPredicted RBP6.25□□□□□ -1.41
SNHG1-201ENST00000535076 MYRIPQ8NFW9 859 aa6.25□□□□□ -1.41
SNHG1-201ENST00000535076 ZDHHC1Q8WTX9 485 aa6.25□□□□□ -1.41
SNHG1-201ENST00000535076 GLMNQ92990 594 aa6.25□□□□□ -1.41
SNHG1-201ENST00000535076 SPATA32Q96LK8 384 aa6.25□□□□□ -1.41
SNHG1-201ENST00000535076 RASSF4Q9H2L5 321 aa6.25□□□□□ -1.41
SNHG1-201ENST00000535076 CHCHD3Q9NX63 227 aaKnown RBP6.25□□□□□ -1.41
SNHG1-201ENST00000535076 NOD1Q9Y239 953 aa6.25□□□□□ -1.41
SNHG1-201ENST00000535076 DDX49Q9Y6V7 483 aaKnown RBP6.25□□□□□ -1.41
SNHG1-201ENST00000535076 KANK1Q14678 1352 aa6.25□□□□□ -1.41
SNHG1-201ENST00000535076 RPGRIP1LQ68CZ1 1315 aa6.25□□□□□ -1.41
SNHG1-201ENST00000535076 ATP9BO43861 1147 aa6.24□□□□□ -1.41
SNHG1-201ENST00000535076 PPFIA2O75334 1257 aa6.24□□□□□ -1.41
SNHG1-201ENST00000535076 RHBDL3P58872 404 aa6.24□□□□□ -1.41
SNHG1-201ENST00000535076 SRSF11Q05519 484 aaKnown RBP6.24□□□□□ -1.41
SNHG1-201ENST00000535076 NEXNQ0ZGT2 675 aa6.24□□□□□ -1.41
SNHG1-201ENST00000535076 FOXD4Q12950 439 aaPredicted RBP6.24□□□□□ -1.41
SNHG1-201ENST00000535076 ZSCAN26Q16670 478 aa6.24□□□□□ -1.41
SNHG1-201ENST00000535076 AMOTQ4VCS5 1084 aa6.24□□□□□ -1.41
SNHG1-201ENST00000535076 GET4Q7L5D6 327 aaPredicted RBP6.24□□□□□ -1.41
SNHG1-201ENST00000535076 PLEKHM2Q8IWE5 1019 aa6.24□□□□□ -1.41
SNHG1-201ENST00000535076 FAM184AQ8NB25 1140 aa6.24□□□□□ -1.41
SNHG1-201ENST00000535076 GMCL1Q96IK5 515 aa6.24□□□□□ -1.41
SNHG1-201ENST00000535076 UPF2Q9HAU5 1272 aaKnown RBP6.24□□□□□ -1.41
SNHG1-201ENST00000535076 DNAAF2Q9NVR5 837 aaKnown RBP6.24□□□□□ -1.41
SNHG1-201ENST00000535076 CWC15Q9P013 229 aaKnown RBP6.24□□□□□ -1.41
SNHG1-201ENST00000535076 SUGT1Q9Y2Z0 365 aa6.24□□□□□ -1.41
SNHG1-201ENST00000535076 PRDM2Q13029 1718 aa6.24□□□□□ -1.41
SNHG1-201ENST00000535076 DHX29Q7Z478 1369 aaKnown RBP6.23□□□□□ -1.41
SNHG1-201ENST00000535076 A6NJY4 79 aa6.23□□□□□ -1.41
SNHG1-201ENST00000535076 CELA2BP08218 269 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-201ENST00000535076 HSP90AB1P08238 724 aaKnown RBP6.23□□□□□ -1.41
SNHG1-201ENST00000535076 CT47B1P0C2W7 299 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-201ENST00000535076 SLFN14P0C7P3 912 aa6.23□□□□□ -1.41
SNHG1-201ENST00000535076 VDRP11473 427 aa6.23□□□□□ -1.41
SNHG1-201ENST00000535076 CASQ1P31415 396 aa6.23□□□□□ -1.41
SNHG1-201ENST00000535076 FOXK2Q01167 660 aa6.23□□□□□ -1.41
SNHG1-201ENST00000535076 KIAA2012Q0VF49 1180 aa6.23□□□□□ -1.41
SNHG1-201ENST00000535076 TRAF1Q13077 416 aa6.23□□□□□ -1.41
SNHG1-201ENST00000535076 CHAF1AQ13111 956 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-201ENST00000535076 BIRC2Q13490 618 aa6.23□□□□□ -1.41
SNHG1-201ENST00000535076 SYCP1Q15431 976 aa6.23□□□□□ -1.41
SNHG1-201ENST00000535076 FILIP1LQ4L180 1135 aa6.23□□□□□ -1.41
SNHG1-201ENST00000535076 TBCELQ5QJ74 424 aa6.23□□□□□ -1.41
SNHG1-201ENST00000535076 SUGP1Q8IWZ8 645 aaKnown RBP6.23□□□□□ -1.41
SNHG1-201ENST00000535076 SVOPQ8N4V2 548 aa6.23□□□□□ -1.41
SNHG1-201ENST00000535076 OGFOD1Q8N543 542 aa6.23□□□□□ -1.41
SNHG1-201ENST00000535076 ATL2Q8NHH9 583 aa6.23□□□□□ -1.41
SNHG1-201ENST00000535076 MORC4Q8TE76 937 aa6.23□□□□□ -1.41
SNHG1-201ENST00000535076 ACDQ96AP0 544 aa6.23□□□□□ -1.41
SNHG1-201ENST00000535076 MAF1Q9H063 256 aa6.23□□□□□ -1.41
SNHG1-201ENST00000535076 DEF6Q9H4E7 631 aa6.23□□□□□ -1.41
SNHG1-201ENST00000535076 MBIPQ9NS73 344 aa6.23□□□□□ -1.41
SNHG1-201ENST00000535076 NDFIP2Q9NV92 336 aa6.23□□□□□ -1.41
SNHG1-201ENST00000535076 NOL7Q9UMY1 257 aaKnown RBP6.23□□□□□ -1.41
SNHG1-201ENST00000535076 ADAMTS8Q9UP79 889 aa6.23□□□□□ -1.41
SNHG1-201ENST00000535076 PARP3Q9Y6F1 533 aa6.23□□□□□ -1.41
SNHG1-201ENST00000535076 SMARCA2P51531 1590 aa6.23□□□□□ -1.41
SNHG1-201ENST00000535076 A6NJR5 290 aa6.22□□□□□ -1.41
SNHG1-201ENST00000535076 UNCXA6NJT0 531 aa6.22□□□□□ -1.41
SNHG1-201ENST00000535076 H7C1W4 665 aa6.22□□□□□ -1.41
SNHG1-201ENST00000535076 CDK2AP1O14519 115 aa6.22□□□□□ -1.41
SNHG1-201ENST00000535076 CBFA2T2O43439 604 aa6.22□□□□□ -1.41
SNHG1-201ENST00000535076 PPFIA4O75335 1185 aa6.22□□□□□ -1.41
SNHG1-201ENST00000535076 SF3A1Q15459 793 aaKnown RBP6.22□□□□□ -1.41
SNHG1-201ENST00000535076 MUM1L1Q5H9M0 696 aa6.22□□□□□ -1.41
SNHG1-201ENST00000535076 SH3PXD2AQ5TCZ1 1133 aa6.22□□□□□ -1.41
SNHG1-201ENST00000535076 CLEC4GQ6UXB4 293 aa6.22□□□□□ -1.41
SNHG1-201ENST00000535076 TNS4Q8IZW8 715 aa6.22□□□□□ -1.41
SNHG1-201ENST00000535076 TPCN2Q8NHX9 752 aa6.22□□□□□ -1.41
SNHG1-201ENST00000535076 CEP89Q96ST8 783 aa6.22□□□□□ -1.41
SNHG1-201ENST00000535076 POLR3CQ9BUI4 534 aaPredicted RBP6.22□□□□□ -1.41
SNHG1-201ENST00000535076 IRF2BPLQ9H1B7 796 aa6.22□□□□□ -1.41
SNHG1-201ENST00000535076 GRPEL1Q9HAV7 217 aa6.22□□□□□ -1.41
SNHG1-201ENST00000535076 UTP6Q9NYH9 597 aaKnown RBP6.22□□□□□ -1.41
SNHG1-201ENST00000535076 SCHIP1Q9P0W5 487 aaPredicted RBP6.22□□□□□ -1.41
SNHG1-201ENST00000535076 RSPH14Q9UHP6 348 aa6.22□□□□□ -1.41
SNHG1-201ENST00000535076 FAM181BA6NEQ2 426 aa6.21□□□□□ -1.42
SNHG1-201ENST00000535076 C2CD2LO14523 706 aa6.21□□□□□ -1.42
SNHG1-201ENST00000535076 TXLNAP40222 546 aa6.21□□□□□ -1.42
SNHG1-201ENST00000535076 CCT2P78371 535 aaKnown RBP6.21□□□□□ -1.42
SNHG1-201ENST00000535076 CBX1P83916 185 aa6.21□□□□□ -1.42
SNHG1-201ENST00000535076 PSME1Q06323 249 aa6.21□□□□□ -1.42
SNHG1-201ENST00000535076 RASA3Q14644 834 aa6.21□□□□□ -1.42
SNHG1-201ENST00000535076 TERF2Q15554 542 aa6.21□□□□□ -1.42
SNHG1-201ENST00000535076 ANKRD13BQ86YJ7 626 aa6.21□□□□□ -1.42
SNHG1-201ENST00000535076 SAMD3Q8N6K7 520 aa6.21□□□□□ -1.42
SNHG1-201ENST00000535076 PNISRQ8TF01 805 aaKnown RBP6.21□□□□□ -1.42
SNHG1-201ENST00000535076 ABHD17AQ96GS6 310 aa6.21□□□□□ -1.42
SNHG1-201ENST00000535076 CFAP53Q96M91 514 aa6.21□□□□□ -1.42
SNHG1-201ENST00000535076 ARPC5LQ9BPX5 153 aa6.21□□□□□ -1.42
SNHG1-201ENST00000535076 LZTS2Q9BRK4 669 aa6.21□□□□□ -1.42
SNHG1-201ENST00000535076 NOL10Q9BSC4 688 aaKnown RBP6.21□□□□□ -1.42
SNHG1-201ENST00000535076 MMTAG2Q9BU76 263 aaKnown RBP6.21□□□□□ -1.42
SNHG1-201ENST00000535076 NIFKQ9BYG3 293 aaKnown RBP6.21□□□□□ -1.42
SNHG1-201ENST00000535076 CRISPLD1Q9H336 500 aa6.21□□□□□ -1.42
SNHG1-201ENST00000535076 TFIP11Q9UBB9 837 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms