RNA–Protein interactions for RNA: ENST00000535040.4

TPBG-202, Transcript of trophoblast glycoprotein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TPBG, Length 3,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPBG-202ENST00000535040 HDAC5Q9UQL6 1122 aa18.38■□□□□ 0.53
TPBG-202ENST00000535040 STK3Q13188 491 aa18.38■□□□□ 0.53
TPBG-202ENST00000535040 DRC7Q8IY82 874 aa18.38■□□□□ 0.53
TPBG-202ENST00000535040 CARD10Q9BWT7 1032 aa18.38■□□□□ 0.53
TPBG-202ENST00000535040 BICC1Q9H694 974 aaKnown RBP18.38■□□□□ 0.53
TPBG-202ENST00000535040 HEG1Q9ULI3 1381 aa18.38■□□□□ 0.53
TPBG-202ENST00000535040 CYP27B1O15528 508 aa18.38■□□□□ 0.53
TPBG-202ENST00000535040 IL2RBP14784 551 aa18.38■□□□□ 0.53
TPBG-202ENST00000535040 C16orf45Q96MC5 204 aaPredicted RBP18.38■□□□□ 0.53
TPBG-202ENST00000535040 SMTNL1A8MU46 457 aa18.37■□□□□ 0.53
TPBG-202ENST00000535040 GIGYF1O75420 1035 aaPredicted RBP18.37■□□□□ 0.53
TPBG-202ENST00000535040 G3BP1Q13283 466 aaKnown RBP eCLIP18.37■□□□□ 0.53
TPBG-202ENST00000535040 CERKQ8TCT0 537 aa18.37■□□□□ 0.53
TPBG-202ENST00000535040 DNAJC25Q9H1X3 360 aa18.37■□□□□ 0.53
TPBG-202ENST00000535040 HMG20BQ9P0W2 317 aa18.37■□□□□ 0.53
TPBG-202ENST00000535040 GRM8O00222 908 aa18.37■□□□□ 0.53
TPBG-202ENST00000535040 ZNF165P49910 485 aa18.37■□□□□ 0.53
TPBG-202ENST00000535040 RESTQ13127 1097 aa18.37■□□□□ 0.53
TPBG-202ENST00000535040 SYCP1Q15431 976 aa18.37■□□□□ 0.53
TPBG-202ENST00000535040 MRC1P22897 1456 aa18.37■□□□□ 0.53
TPBG-202ENST00000535040 ZCRB1Q8TBF4 217 aaKnown RBP18.36■□□□□ 0.53
TPBG-202ENST00000535040 COL16A1Q07092 1604 aaPredicted RBP18.36■□□□□ 0.53
TPBG-202ENST00000535040 JAK2O60674 1132 aa18.36■□□□□ 0.53
TPBG-202ENST00000535040 CCDC9Q9Y3X0 531 aaKnown RBP18.36■□□□□ 0.53
TPBG-202ENST00000535040 PRAMEF22A3QJZ6 481 aa18.36■□□□□ 0.53
TPBG-202ENST00000535040 TAF5LO75529 589 aa18.36■□□□□ 0.53
TPBG-202ENST00000535040 CCDC144BQ3MJ40 725 aa18.36■□□□□ 0.53
TPBG-202ENST00000535040 USPL1Q5W0Q7 1092 aa18.36■□□□□ 0.53
TPBG-202ENST00000535040 CCDC144CPQ8IYA2 1237 aa18.36■□□□□ 0.53
TPBG-202ENST00000535040 LINS1Q8NG48 757 aa18.36■□□□□ 0.53
TPBG-202ENST00000535040 CACTINQ8WUQ7 758 aaKnown RBP18.36■□□□□ 0.53
TPBG-202ENST00000535040 GTF3C6Q969F1 213 aa18.36■□□□□ 0.53
TPBG-202ENST00000535040 BICD2Q8TD16 824 aa18.35■□□□□ 0.53
TPBG-202ENST00000535040 COL15A1P39059 1388 aa18.35■□□□□ 0.53
TPBG-202ENST00000535040 SIPA1L3O60292 1781 aaPredicted RBP18.35■□□□□ 0.53
TPBG-202ENST00000535040 CDC25BP30305 580 aa18.35■□□□□ 0.53
TPBG-202ENST00000535040 SLC39A6Q13433 755 aa18.35■□□□□ 0.53
TPBG-202ENST00000535040 NFATC2IPQ8NCF5 419 aa18.35■□□□□ 0.53
TPBG-202ENST00000535040 CLIP2Q9UDT6 1046 aa18.35■□□□□ 0.53
TPBG-202ENST00000535040 TNNT1P13805 278 aa18.34■□□□□ 0.53
TPBG-202ENST00000535040 BRF1Q92994 677 aa18.34■□□□□ 0.53
TPBG-202ENST00000535040 SIL1Q9H173 461 aa18.34■□□□□ 0.53
TPBG-202ENST00000535040 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.34■□□□□ 0.53
TPBG-202ENST00000535040 IQCB1Q15051 598 aa18.33■□□□□ 0.53
TPBG-202ENST00000535040 FEZ1Q99689 392 aa18.33■□□□□ 0.52
TPBG-202ENST00000535040 OVOS2A0A0G2JMS6 1433 aa18.33■□□□□ 0.52
TPBG-202ENST00000535040 CAVIN2O95810 425 aa18.33■□□□□ 0.52
TPBG-202ENST00000535040 EDC3Q96F86 508 aaKnown RBP18.33■□□□□ 0.52
TPBG-202ENST00000535040 KDM6AO15550 1401 aaPredicted RBP18.32■□□□□ 0.52
TPBG-202ENST00000535040 KLHDC4Q8TBB5 520 aa18.32■□□□□ 0.52
TPBG-202ENST00000535040 PAXBP1Q9Y5B6 917 aa18.32■□□□□ 0.52
TPBG-202ENST00000535040 LAMA4Q16363 1823 aa18.32■□□□□ 0.52
TPBG-202ENST00000535040 SARM1Q6SZW1 724 aa18.32■□□□□ 0.52
TPBG-202ENST00000535040 DDX11Q96FC9 970 aa18.32■□□□□ 0.52
TPBG-202ENST00000535040 PCDH11XQ9BZA7 1347 aa18.31■□□□□ 0.52
TPBG-202ENST00000535040 PCDH11YQ9BZA8 1340 aa18.31■□□□□ 0.52
TPBG-202ENST00000535040 KRT32Q14532 448 aa18.31■□□□□ 0.52
TPBG-202ENST00000535040 DCAF5Q96JK2 942 aa18.31■□□□□ 0.52
TPBG-202ENST00000535040 C8orf37Q96NL8 207 aa18.31■□□□□ 0.52
TPBG-202ENST00000535040 PODXL2Q9NZ53 605 aa18.31■□□□□ 0.52
TPBG-202ENST00000535040 CTNNA3Q9UI47 895 aa18.31■□□□□ 0.52
TPBG-202ENST00000535040 IGKV5-2P06315 115 aa18.31■□□□□ 0.52
TPBG-202ENST00000535040 CABP4P57796 275 aa18.31■□□□□ 0.52
TPBG-202ENST00000535040 C11orf57Q6ZUT1 292 aaPredicted RBP18.31■□□□□ 0.52
TPBG-202ENST00000535040 SLC52A2Q9HAB3 445 aa18.31■□□□□ 0.52
TPBG-202ENST00000535040 ADD1P35611 737 aaKnown RBP18.3■□□□□ 0.52
TPBG-202ENST00000535040 NAA30Q147X3 362 aaPredicted RBP18.3■□□□□ 0.52
TPBG-202ENST00000535040 TPD52L1Q16890 204 aaPredicted RBP18.3■□□□□ 0.52
TPBG-202ENST00000535040 NEK1Q96PY6 1258 aa18.3■□□□□ 0.52
TPBG-202ENST00000535040 ZSCAN16Q9H4T2 348 aaPredicted RBP18.3■□□□□ 0.52
TPBG-202ENST00000535040 Q6ZUG5 572 aa18.3■□□□□ 0.52
TPBG-202ENST00000535040 LRRC8AQ8IWT6 810 aa18.3■□□□□ 0.52
TPBG-202ENST00000535040 COL22A1Q8NFW1 1626 aaPredicted RBP18.3■□□□□ 0.52
TPBG-202ENST00000535040 PDIA6Q15084 440 aa18.3■□□□□ 0.52
TPBG-202ENST00000535040 OGFRQ9NZT2 677 aa18.3■□□□□ 0.52
TPBG-202ENST00000535040 COL14A1Q05707 1796 aaKnown RBP18.29■□□□□ 0.52
TPBG-202ENST00000535040 A0A0G2JS52 829 aa18.29■□□□□ 0.52
TPBG-202ENST00000535040 CCDC112Q8NEF3 446 aa18.29■□□□□ 0.52
TPBG-202ENST00000535040 MRFAP1L1Q96HT8 127 aa18.29■□□□□ 0.52
TPBG-202ENST00000535040 CFAP45Q9UL16 551 aa18.29■□□□□ 0.52
TPBG-202ENST00000535040 KIF20AO95235 890 aa18.29■□□□□ 0.52
TPBG-202ENST00000535040 RBM6P78332 1123 aaKnown RBP18.29■□□□□ 0.52
TPBG-202ENST00000535040 DDX21Q9NR30 783 aaKnown RBP eCLIP18.29■□□□□ 0.52
TPBG-202ENST00000535040 ZNF609O15014 1411 aa18.29■□□□□ 0.52
TPBG-202ENST00000535040 AIMP1Q12904 312 aaKnown RBP18.28■□□□□ 0.52
TPBG-202ENST00000535040 ARID5BQ14865 1188 aa18.28■□□□□ 0.52
TPBG-202ENST00000535040 SMARCC2Q8TAQ2 1214 aa18.28■□□□□ 0.52
TPBG-202ENST00000535040 H3BQV1 296 aa18.28■□□□□ 0.52
TPBG-202ENST00000535040 DDX58O95786 925 aaKnown RBP18.28■□□□□ 0.52
TPBG-202ENST00000535040 EPHA10Q5JZY3 1008 aa18.28■□□□□ 0.52
TPBG-202ENST00000535040 IFFO2Q5TF58 517 aa18.28■□□□□ 0.52
TPBG-202ENST00000535040 NGLY1Q96IV0 654 aa18.28■□□□□ 0.52
TPBG-202ENST00000535040 SCRN1Q12765 414 aa18.28■□□□□ 0.52
TPBG-202ENST00000535040 TTC5Q8N0Z6 440 aa18.28■□□□□ 0.52
TPBG-202ENST00000535040 USP27XA6NNY8 438 aa18.27■□□□□ 0.52
TPBG-202ENST00000535040 ATP5JP18859 108 aa18.27■□□□□ 0.52
TPBG-202ENST00000535040 CEP135Q66GS9 1140 aa18.27■□□□□ 0.52
TPBG-202ENST00000535040 GOLPH3LQ9H4A5 285 aa18.27■□□□□ 0.52
TPBG-202ENST00000535040 GOLGA6L19H0YKK7 550 aa18.27■□□□□ 0.52
TPBG-202ENST00000535040 CHGBP05060 677 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms