RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 NSFL1CQ9UNZ2 370 aaKnown RBP13.22□□□□□ -0.29
CSDE1-217ENST00000534699 VIL1P09327 827 aaKnown RBP13.22□□□□□ -0.29
CSDE1-217ENST00000534699 IGHMBP2P38935 993 aaKnown RBP13.22□□□□□ -0.29
CSDE1-217ENST00000534699 FKBP5Q13451 457 aaPredicted RBP13.22□□□□□ -0.29
CSDE1-217ENST00000534699 CLEC11AQ9Y240 323 aa13.22□□□□□ -0.29
CSDE1-217ENST00000534699 A0A1B0GUL6 1792 aa13.22□□□□□ -0.29
CSDE1-217ENST00000534699 ALDH1L2Q3SY69 923 aa13.21□□□□□ -0.29
CSDE1-217ENST00000534699 BCL2L13Q9BXK5 485 aa13.21□□□□□ -0.29
CSDE1-217ENST00000534699 C6orf229H3BNL8 230 aa13.21□□□□□ -0.3
CSDE1-217ENST00000534699 ECE1P42892 770 aa13.21□□□□□ -0.3
CSDE1-217ENST00000534699 GMPSP49915 693 aaPredicted RBP13.2□□□□□ -0.3
CSDE1-217ENST00000534699 BRPF1P55201 1214 aaPredicted RBP13.2□□□□□ -0.3
CSDE1-217ENST00000534699 EAPPQ56P03 285 aaPredicted RBP13.2□□□□□ -0.3
CSDE1-217ENST00000534699 POLLQ9UGP5 575 aa13.2□□□□□ -0.3
CSDE1-217ENST00000534699 HDAC5Q9UQL6 1122 aa13.2□□□□□ -0.3
CSDE1-217ENST00000534699 UTYO14607 1347 aa13.2□□□□□ -0.3
CSDE1-217ENST00000534699 SPEF2Q9C093 1822 aa13.2□□□□□ -0.3
CSDE1-217ENST00000534699 COA1Q9GZY4 146 aa13.2□□□□□ -0.3
CSDE1-217ENST00000534699 ZNF646O15015 1829 aaPredicted RBP13.2□□□□□ -0.3
CSDE1-217ENST00000534699 ECE2O60344 883 aa13.19□□□□□ -0.3
CSDE1-217ENST00000534699 FKBP1AP62942 108 aaKnown RBP13.19□□□□□ -0.3
CSDE1-217ENST00000534699 BEND3Q5T5X7 828 aa13.19□□□□□ -0.3
CSDE1-217ENST00000534699 PITPNM2Q9BZ72 1349 aa13.19□□□□□ -0.3
CSDE1-217ENST00000534699 G3V3G9 751 aa13.19□□□□□ -0.3
CSDE1-217ENST00000534699 DCAF8Q5TAQ9 597 aa13.19□□□□□ -0.3
CSDE1-217ENST00000534699 CDC37L1Q7L3B6 337 aa13.19□□□□□ -0.3
CSDE1-217ENST00000534699 G2E3Q7L622 706 aa13.19□□□□□ -0.3
CSDE1-217ENST00000534699 ANKIB1Q9P2G1 1089 aa13.19□□□□□ -0.3
CSDE1-217ENST00000534699 ANKRD18BA2A2Z9 1011 aa13.18□□□□□ -0.3
CSDE1-217ENST00000534699 YDJCA8MPS7 323 aa13.18□□□□□ -0.3
CSDE1-217ENST00000534699 UFL1O94874 794 aa13.18□□□□□ -0.3
CSDE1-217ENST00000534699 EPS15P42566 896 aa13.18□□□□□ -0.3
CSDE1-217ENST00000534699 ZNF280AP59817 542 aaPredicted RBP13.18□□□□□ -0.3
CSDE1-217ENST00000534699 CNOT7Q9UIV1 285 aaKnown RBP13.18□□□□□ -0.3
CSDE1-217ENST00000534699 FAM9BQ8IZU0 186 aa13.18□□□□□ -0.3
CSDE1-217ENST00000534699 SLFN5Q08AF3 891 aa13.17□□□□□ -0.3
CSDE1-217ENST00000534699 TRMT2AQ8IZ69 625 aaKnown RBP13.17□□□□□ -0.3
CSDE1-217ENST00000534699 SEC31BQ9NQW1 1179 aa13.17□□□□□ -0.3
CSDE1-217ENST00000534699 MINPP1Q9UNW1 487 aa13.17□□□□□ -0.3
CSDE1-217ENST00000534699 TCERG1O14776 1098 aaKnown RBP13.17□□□□□ -0.3
CSDE1-217ENST00000534699 ZBTB22O15209 634 aa13.17□□□□□ -0.3
CSDE1-217ENST00000534699 UBE3BQ7Z3V4 1068 aa13.17□□□□□ -0.3
CSDE1-217ENST00000534699 REM2Q8IYK8 340 aaPredicted RBP13.17□□□□□ -0.3
CSDE1-217ENST00000534699 TLL2Q9Y6L7 1015 aa13.17□□□□□ -0.3
CSDE1-217ENST00000534699 COL1A1P02452 1464 aaPredicted RBP13.17□□□□□ -0.3
CSDE1-217ENST00000534699 DEFB115Q30KQ5 88 aa13.16□□□□□ -0.3
CSDE1-217ENST00000534699 RSBN1LQ6PCB5 846 aaPredicted RBP13.16□□□□□ -0.3
CSDE1-217ENST00000534699 SRCIN1Q9C0H9 1055 aa13.16□□□□□ -0.3
CSDE1-217ENST00000534699 PRDM10Q9NQV6 1147 aa13.16□□□□□ -0.3
CSDE1-217ENST00000534699 COL4A1P02462 1669 aa13.16□□□□□ -0.3
CSDE1-217ENST00000534699 USP17L3A6NCW0 530 aa13.16□□□□□ -0.3
CSDE1-217ENST00000534699 USP17L4A6NCW7 530 aa13.16□□□□□ -0.3
CSDE1-217ENST00000534699 GRM8O00222 908 aa13.16□□□□□ -0.3
CSDE1-217ENST00000534699 PSMD14O00487 310 aa13.16□□□□□ -0.3
CSDE1-217ENST00000534699 CCT4P50991 539 aaKnown RBP13.16□□□□□ -0.3
CSDE1-217ENST00000534699 CWF19L2Q2TBE0 894 aaKnown RBP13.16□□□□□ -0.3
CSDE1-217ENST00000534699 IFFO2Q5TF58 517 aa13.16□□□□□ -0.3
CSDE1-217ENST00000534699 USP17L1Q7RTZ2 530 aa13.16□□□□□ -0.3
CSDE1-217ENST00000534699 MPHOSPH8Q99549 860 aa13.16□□□□□ -0.3
CSDE1-217ENST00000534699 POTEIP0CG38 1075 aa13.16□□□□□ -0.3
CSDE1-217ENST00000534699 POTEJP0CG39 1038 aa13.16□□□□□ -0.3
CSDE1-217ENST00000534699 MAP2K2P36507 400 aa13.16□□□□□ -0.3
CSDE1-217ENST00000534699 MAP2K1Q02750 393 aaPredicted RBP13.16□□□□□ -0.3
CSDE1-217ENST00000534699 STRIP1Q5VSL9 837 aa13.16□□□□□ -0.3
CSDE1-217ENST00000534699 GREM2Q9H772 168 aa13.16□□□□□ -0.3
CSDE1-217ENST00000534699 SCN9AQ15858 1988 aa13.15□□□□□ -0.3
CSDE1-217ENST00000534699 ECM29Q5VYK3 1845 aa13.15□□□□□ -0.3
CSDE1-217ENST00000534699 ITGA6P23229 1130 aa13.15□□□□□ -0.3
CSDE1-217ENST00000534699 FKBP1BP68106 108 aa13.15□□□□□ -0.3
CSDE1-217ENST00000534699 IFIT5Q13325 482 aaKnown RBP13.15□□□□□ -0.3
CSDE1-217ENST00000534699 GMLQ99445 158 aa13.15□□□□□ -0.3
CSDE1-217ENST00000534699 CA12O43570 354 aa13.15□□□□□ -0.31
CSDE1-217ENST00000534699 RAD17O75943 681 aa13.15□□□□□ -0.31
CSDE1-217ENST00000534699 FOXO4P98177 505 aa13.15□□□□□ -0.31
CSDE1-217ENST00000534699 MICALL2Q8IY33 904 aa13.15□□□□□ -0.31
CSDE1-217ENST00000534699 MRPL50Q8N5N7 158 aaKnown RBP13.15□□□□□ -0.31
CSDE1-217ENST00000534699 MAP1SQ66K74 1059 aaPredicted RBP13.14□□□□□ -0.31
CSDE1-217ENST00000534699 FBXO3Q9UK99 471 aa13.14□□□□□ -0.31
CSDE1-217ENST00000534699 ARAP2Q8WZ64 1704 aa13.14□□□□□ -0.31
CSDE1-217ENST00000534699 AIDAQ96BJ3 306 aa13.14□□□□□ -0.31
CSDE1-217ENST00000534699 DCPSQ96C86 337 aaKnown RBP13.13□□□□□ -0.31
CSDE1-217ENST00000534699 ZNF804BA4D1E1 1349 aa13.13□□□□□ -0.31
CSDE1-217ENST00000534699 RABL6Q3YEC7 729 aaPredicted RBP13.13□□□□□ -0.31
CSDE1-217ENST00000534699 RTL5Q5HYW3 569 aaPredicted RBP13.13□□□□□ -0.31
CSDE1-217ENST00000534699 KIF16BQ96L93 1317 aa13.13□□□□□ -0.31
CSDE1-217ENST00000534699 PAPPA2Q9BXP8 1791 aa13.13□□□□□ -0.31
CSDE1-217ENST00000534699 DBNDD1Q9H9R9 158 aa13.13□□□□□ -0.31
CSDE1-217ENST00000534699 SPINK5Q9NQ38 1064 aaPredicted RBP13.13□□□□□ -0.31
CSDE1-217ENST00000534699 C9orf78Q9NZ63 289 aaPredicted RBP13.13□□□□□ -0.31
CSDE1-217ENST00000534699 UNCXA6NJT0 531 aa13.12□□□□□ -0.31
CSDE1-217ENST00000534699 RIMBP2O15034 1052 aa13.12□□□□□ -0.31
CSDE1-217ENST00000534699 CTCFP49711 727 aaPredicted RBP13.12□□□□□ -0.31
CSDE1-217ENST00000534699 CCDC57Q2TAC2 916 aa13.12□□□□□ -0.31
CSDE1-217ENST00000534699 MTMR14Q8NCE2 650 aa13.12□□□□□ -0.31
CSDE1-217ENST00000534699 ARHGAP45Q92619 1136 aa13.12□□□□□ -0.31
CSDE1-217ENST00000534699 HDAC9Q9UKV0 1011 aa13.12□□□□□ -0.31
CSDE1-217ENST00000534699 WDR33Q9C0J8 1336 aaKnown RBP13.12□□□□□ -0.31
CSDE1-217ENST00000534699 HSPA1AP0DMV8 641 aaKnown RBP13.12□□□□□ -0.31
CSDE1-217ENST00000534699 HSPA1BP0DMV9 641 aaKnown RBP13.12□□□□□ -0.31
CSDE1-217ENST00000534699 UBE4AQ14139 1066 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms