RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	ZNF853	P0CG23	659 aa		14.99	□□□□□ -0.01
CTNND1-238	ENST00000534647	RPS12	P25398	132 aa	Known RBP	14.99	□□□□□ -0.01
CTNND1-238	ENST00000534647	BRPF1	P55201	1214 aa	Predicted RBP	14.99	□□□□□ -0.01
CTNND1-238	ENST00000534647	WDR43	Q15061	677 aa	Known RBP eCLIP	14.99	□□□□□ -0.01	3e-9	■■■□□ 15.6
CTNND1-238	ENST00000534647	DUSP27	Q5VZP5	1158 aa		14.99	□□□□□ -0.01
CTNND1-238	ENST00000534647	TRPM4	Q8TD43	1214 aa		14.99	□□□□□ -0.01
CTNND1-238	ENST00000534647	CELF1	Q92879	486 aa	Known RBP	14.99	□□□□□ -0.01
CTNND1-238	ENST00000534647	NSFL1C	Q9UNZ2	370 aa	Known RBP	14.99	□□□□□ -0.01
CTNND1-238	ENST00000534647	LRRC37A	A6NMS7	1700 aa		14.99	□□□□□ -0.01
CTNND1-238	ENST00000534647	ATP5J2-PTCD1	G3V325	749 aa		14.98	□□□□□ -0.01
CTNND1-238	ENST00000534647	PSMD14	O00487	310 aa		14.98	□□□□□ -0.01
CTNND1-238	ENST00000534647	AOC2	O75106	756 aa		14.98	□□□□□ -0.01
CTNND1-238	ENST00000534647	HSP90B1	P14625	803 aa	Known RBP	14.98	□□□□□ -0.01
CTNND1-238	ENST00000534647	RPS8	P62241	208 aa	Known RBP	14.98	□□□□□ -0.01
CTNND1-238	ENST00000534647	MICALL2	Q8IY33	904 aa		14.98	□□□□□ -0.01
CTNND1-238	ENST00000534647	EYA3	Q99504	573 aa		14.98	□□□□□ -0.01
CTNND1-238	ENST00000534647	POLL	Q9UGP5	575 aa		14.98	□□□□□ -0.01
CTNND1-238	ENST00000534647	IRS4	O14654	1257 aa	Predicted RBP	14.97	□□□□□ -0.01
CTNND1-238	ENST00000534647	GPSM2	P81274	684 aa		14.97	□□□□□ -0.01
CTNND1-238	ENST00000534647	DDX10	Q13206	875 aa	Known RBP	14.97	□□□□□ -0.01
CTNND1-238	ENST00000534647	MIER1	Q8N108	512 aa		14.97	□□□□□ -0.01
CTNND1-238	ENST00000534647	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	14.97	□□□□□ -0.01
CTNND1-238	ENST00000534647	MBIP	Q9NS73	344 aa		14.97	□□□□□ -0.01
CTNND1-238	ENST00000534647	SHTN1	A0MZ66	631 aa		14.96	□□□□□ -0.01
CTNND1-238	ENST00000534647	C6orf229	H3BNL8	230 aa		14.96	□□□□□ -0.01
CTNND1-238	ENST00000534647	GRM1	Q13255	1194 aa		14.96	□□□□□ -0.01
CTNND1-238	ENST00000534647	TBC1D16	Q8TBP0	767 aa		14.96	□□□□□ -0.01
CTNND1-238	ENST00000534647	ZBTB12	Q9Y330	459 aa	Predicted RBP	14.96	□□□□□ -0.01
CTNND1-238	ENST00000534647	DDX60	Q8IY21	1712 aa	Known RBP	14.95	□□□□□ -0.02
CTNND1-238	ENST00000534647	ECE2	O60344	883 aa		14.95	□□□□□ -0.02
CTNND1-238	ENST00000534647	VIL1	P09327	827 aa	Known RBP	14.95	□□□□□ -0.02
CTNND1-238	ENST00000534647	RGS19	P49795	217 aa		14.95	□□□□□ -0.02
CTNND1-238	ENST00000534647	NOG	Q13253	232 aa		14.95	□□□□□ -0.02
CTNND1-238	ENST00000534647	DIEXF	Q68CQ4	756 aa	Known RBP	14.95	□□□□□ -0.02
CTNND1-238	ENST00000534647	SAMD7	Q7Z3H4	446 aa		14.95	□□□□□ -0.02
CTNND1-238	ENST00000534647	USP48	Q86UV5	1035 aa		14.95	□□□□□ -0.02
CTNND1-238	ENST00000534647	CHMP4A	Q9BY43	222 aa		14.95	□□□□□ -0.02
CTNND1-238	ENST00000534647	DBNDD1	Q9H9R9	158 aa		14.95	□□□□□ -0.02
CTNND1-238	ENST00000534647	IFT57	Q9NWB7	429 aa		14.95	□□□□□ -0.02
CTNND1-238	ENST00000534647	RIMBP2	O15034	1052 aa		14.94	□□□□□ -0.02
CTNND1-238	ENST00000534647	PCCA	P05165	728 aa	Predicted RBP	14.94	□□□□□ -0.02
CTNND1-238	ENST00000534647	GNAI1	P63096	354 aa		14.94	□□□□□ -0.02
CTNND1-238	ENST00000534647	CALD1	Q05682	793 aa	Known RBP	14.94	□□□□□ -0.02
CTNND1-238	ENST00000534647	KRT26	Q7Z3Y9	468 aa		14.94	□□□□□ -0.02
CTNND1-238	ENST00000534647	RIC3	Q7Z5B4	369 aa		14.94	□□□□□ -0.02
CTNND1-238	ENST00000534647	CCDC191	Q8NCU4	936 aa		14.94	□□□□□ -0.02
CTNND1-238	ENST00000534647	ZC3H12C	Q9C0D7	883 aa	Known RBP	14.94	□□□□□ -0.02
CTNND1-238	ENST00000534647	KCNQ5	Q9NR82	932 aa		14.94	□□□□□ -0.02
CTNND1-238	ENST00000534647	RTL9	Q8NET4	1388 aa		14.94	□□□□□ -0.02
CTNND1-238	ENST00000534647	TAF1	P21675	1872 aa		14.93	□□□□□ -0.02
CTNND1-238	ENST00000534647	GOLGA2	Q08379	1002 aa		14.93	□□□□□ -0.02
CTNND1-238	ENST00000534647	ZNF428	Q96B54	188 aa		14.93	□□□□□ -0.02
CTNND1-238	ENST00000534647	DCPS	Q96C86	337 aa	Known RBP	14.93	□□□□□ -0.02
CTNND1-238	ENST00000534647	PHAX	Q9H814	394 aa	Known RBP	14.93	□□□□□ -0.02
CTNND1-238	ENST00000534647	ZNF408	Q9H9D4	720 aa		14.93	□□□□□ -0.02
CTNND1-238	ENST00000534647	ZNF609	O15014	1411 aa		14.92	□□□□□ -0.02
CTNND1-238	ENST00000534647	EGFR	P00533	1210 aa		14.92	□□□□□ -0.02
CTNND1-238	ENST00000534647	HUNK	P57058	714 aa		14.92	□□□□□ -0.02
CTNND1-238	ENST00000534647	DOK7	Q18PE1	504 aa		14.92	□□□□□ -0.02
CTNND1-238	ENST00000534647	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	14.92	□□□□□ -0.02
CTNND1-238	ENST00000534647	RTL5	Q5HYW3	569 aa	Predicted RBP	14.92	□□□□□ -0.02
CTNND1-238	ENST00000534647	CCDC102A	Q96A19	550 aa		14.92	□□□□□ -0.02
CTNND1-238	ENST00000534647	PRKRIP1	Q9H875	184 aa	Predicted RBP	14.92	□□□□□ -0.02
CTNND1-238	ENST00000534647	FAM155A	B1AL88	458 aa	Predicted RBP	14.91	□□□□□ -0.02
CTNND1-238	ENST00000534647	PDE8A	O60658	829 aa		14.91	□□□□□ -0.02
CTNND1-238	ENST00000534647	ZNF280A	P59817	542 aa	Predicted RBP	14.91	□□□□□ -0.02
CTNND1-238	ENST00000534647	CCDC152	Q4G0S7	254 aa		14.91	□□□□□ -0.02
CTNND1-238	ENST00000534647	RGMB	Q6NW40	437 aa		14.91	□□□□□ -0.02
CTNND1-238	ENST00000534647	C2orf69	Q8N8R5	385 aa		14.91	□□□□□ -0.02
CTNND1-238	ENST00000534647	AGBL3	Q8NEM8	1001 aa		14.91	□□□□□ -0.02
CTNND1-238	ENST00000534647	GBA2	Q9HCG7	927 aa	Predicted RBP	14.91	□□□□□ -0.02
CTNND1-238	ENST00000534647	SEC31B	Q9NQW1	1179 aa		14.91	□□□□□ -0.02
CTNND1-238	ENST00000534647	TSKS	Q9UJT2	592 aa		14.91	□□□□□ -0.02
CTNND1-238	ENST00000534647	COL4A1	P02462	1669 aa		14.9	□□□□□ -0.02
CTNND1-238	ENST00000534647	APAF1	O14727	1248 aa		14.9	□□□□□ -0.02
CTNND1-238	ENST00000534647	ZIC5	Q96T25	663 aa		14.9	□□□□□ -0.02
CTNND1-238	ENST00000534647	MYD88	Q99836	296 aa		14.9	□□□□□ -0.02
CTNND1-238	ENST00000534647	METTL22	Q9BUU2	404 aa	Predicted RBP	14.9	□□□□□ -0.02
CTNND1-238	ENST00000534647	SAGE1	Q9NXZ1	904 aa		14.9	□□□□□ -0.02
CTNND1-238	ENST00000534647	ANKIB1	Q9P2G1	1089 aa		14.9	□□□□□ -0.02
CTNND1-238	ENST00000534647	GGA1	Q9UJY5	639 aa		14.9	□□□□□ -0.02
CTNND1-238	ENST00000534647	DDX58	O95786	925 aa	Known RBP	14.89	□□□□□ -0.03
CTNND1-238	ENST00000534647	KIF4B	Q2VIQ3	1234 aa		14.89	□□□□□ -0.03
CTNND1-238	ENST00000534647	RBM26	Q5T8P6	1007 aa	Known RBP	14.89	□□□□□ -0.03
CTNND1-238	ENST00000534647	CCDC30	Q5VVM6	783 aa		14.89	□□□□□ -0.03
CTNND1-238	ENST00000534647	DLK2	Q6UY11	383 aa		14.89	□□□□□ -0.03
CTNND1-238	ENST00000534647	RNF25	Q96BH1	459 aa	Predicted RBP	14.89	□□□□□ -0.03
CTNND1-238	ENST00000534647	GML	Q99445	158 aa		14.89	□□□□□ -0.03
CTNND1-238	ENST00000534647	MCOLN1	Q9GZU1	580 aa		14.89	□□□□□ -0.03
CTNND1-238	ENST00000534647	CWC25	Q9NXE8	425 aa	Predicted RBP	14.89	□□□□□ -0.03
CTNND1-238	ENST00000534647	CCDC85C	A6NKD9	419 aa		14.88	□□□□□ -0.03
CTNND1-238	ENST00000534647	ELL2	O00472	640 aa	Predicted RBP	14.88	□□□□□ -0.03
CTNND1-238	ENST00000534647	UFL1	O94874	794 aa		14.88	□□□□□ -0.03
CTNND1-238	ENST00000534647	RSBN1L	Q6PCB5	846 aa	Predicted RBP	14.88	□□□□□ -0.03
CTNND1-238	ENST00000534647	PODN	Q7Z5L7	613 aa		14.88	□□□□□ -0.03
CTNND1-238	ENST00000534647	SULF1	Q8IWU6	871 aa		14.88	□□□□□ -0.03
CTNND1-238	ENST00000534647	C8orf58	Q8NAV2	365 aa		14.88	□□□□□ -0.03
CTNND1-238	ENST00000534647	XDH	P47989	1333 aa		14.88	□□□□□ -0.03
CTNND1-238	ENST00000534647	ADM5	C9JUS6	153 aa		14.87	□□□□□ -0.03
CTNND1-238	ENST00000534647		G3V3G9	751 aa		14.87	□□□□□ -0.03

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