RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 GLYCTKQ8IVS8 523 aa7.24□□□□□ -1.25
ECHDC1-223ENST00000534442 AIDAQ96BJ3 306 aa7.24□□□□□ -1.25
ECHDC1-223ENST00000534442 KLF16Q9BXK1 252 aaPredicted RBP7.24□□□□□ -1.25
ECHDC1-223ENST00000534442 ARHGEF10LQ9HCE6 1279 aa7.24□□□□□ -1.25
ECHDC1-223ENST00000534442 USP3Q9Y6I4 520 aa7.24□□□□□ -1.25
ECHDC1-223ENST00000534442 PIK3C2BO00750 1634 aa7.23□□□□□ -1.25
ECHDC1-223ENST00000534442 THSD7AQ9UPZ6 1657 aa7.23□□□□□ -1.25
ECHDC1-223ENST00000534442 ADH1AP07327 375 aa7.23□□□□□ -1.25
ECHDC1-223ENST00000534442 ERCC3P19447 782 aa7.23□□□□□ -1.25
ECHDC1-223ENST00000534442 ARHGAP4P98171 946 aa7.23□□□□□ -1.25
ECHDC1-223ENST00000534442 FOXC1Q12948 553 aa7.23□□□□□ -1.25
ECHDC1-223ENST00000534442 CBLBQ13191 982 aa7.23□□□□□ -1.25
ECHDC1-223ENST00000534442 SLC9A9Q8IVB4 645 aa7.23□□□□□ -1.25
ECHDC1-223ENST00000534442 C16orf71Q8IYS4 520 aaPredicted RBP7.23□□□□□ -1.25
ECHDC1-223ENST00000534442 HELQQ8TDG4 1101 aa7.23□□□□□ -1.25
ECHDC1-223ENST00000534442 SAP130Q9H0E3 1048 aa7.23□□□□□ -1.25
ECHDC1-223ENST00000534442 NWD2Q9ULI1 1742 aa7.23□□□□□ -1.25
ECHDC1-223ENST00000534442 RBM47A0AV96 593 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-223ENST00000534442 UNCXA6NJT0 531 aa7.22□□□□□ -1.25
ECHDC1-223ENST00000534442 PPP1R12BO60237 982 aaPredicted RBP7.22□□□□□ -1.25
ECHDC1-223ENST00000534442 FXR1P51114 621 aaKnown RBP eCLIP7.22□□□□□ -1.25
ECHDC1-223ENST00000534442 STAG2Q8N3U4 1231 aa7.22□□□□□ -1.25
ECHDC1-223ENST00000534442 C2orf49Q9BVC5 232 aaPredicted RBP7.22□□□□□ -1.25
ECHDC1-223ENST00000534442 IQSEC3Q9UPP2 1182 aaPredicted RBP7.22□□□□□ -1.25
ECHDC1-223ENST00000534442 RPRD2Q5VT52 1461 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-223ENST00000534442 COL6A3P12111 3177 aa7.22□□□□□ -1.25
ECHDC1-223ENST00000534442 ADGRL3Q9HAR2 1447 aa7.21□□□□□ -1.25
ECHDC1-223ENST00000534442 SZT2Q5T011 3432 aa7.21□□□□□ -1.26
ECHDC1-223ENST00000534442 CDK2AP1O14519 115 aa7.21□□□□□ -1.26
ECHDC1-223ENST00000534442 NPR3P17342 541 aa7.21□□□□□ -1.26
ECHDC1-223ENST00000534442 Q6ZVU0 165 aa7.21□□□□□ -1.26
ECHDC1-223ENST00000534442 NPAS4Q8IUM7 802 aa7.21□□□□□ -1.26
ECHDC1-223ENST00000534442 SNIP1Q8TAD8 396 aaKnown RBP7.21□□□□□ -1.26
ECHDC1-223ENST00000534442 CNKSR1Q969H4 720 aa7.21□□□□□ -1.26
ECHDC1-223ENST00000534442 ITPKCQ96DU7 683 aa7.21□□□□□ -1.26
ECHDC1-223ENST00000534442 ESYT1Q9BSJ8 1104 aa7.21□□□□□ -1.26
ECHDC1-223ENST00000534442 PRAG1Q86YV5 1406 aa7.2□□□□□ -1.26
ECHDC1-223ENST00000534442 ANKRD33BA6NCL7 494 aa7.2□□□□□ -1.26
ECHDC1-223ENST00000534442 J3QL48 77 aa7.2□□□□□ -1.26
ECHDC1-223ENST00000534442 ZNF295-AS1Q8N0V1 137 aa7.2□□□□□ -1.26
ECHDC1-223ENST00000534442 SNX27Q96L92 541 aa7.2□□□□□ -1.26
ECHDC1-223ENST00000534442 AGBL1Q96MI9 1066 aa7.2□□□□□ -1.26
ECHDC1-223ENST00000534442 ZFAND3Q9H8U3 227 aa7.2□□□□□ -1.26
ECHDC1-223ENST00000534442 WASF2Q9Y6W5 498 aa7.2□□□□□ -1.26
ECHDC1-223ENST00000534442 EHBP1L1Q8N3D4 1523 aa7.2□□□□□ -1.26
ECHDC1-223ENST00000534442 NOS1P29475 1434 aa7.19□□□□□ -1.26
ECHDC1-223ENST00000534442 RGPD3A6NKT7 1758 aaPredicted RBP7.19□□□□□ -1.26
ECHDC1-223ENST00000534442 RGPD4Q7Z3J3 1758 aa7.19□□□□□ -1.26
ECHDC1-223ENST00000534442 TRPM2O94759 1503 aa7.19□□□□□ -1.26
ECHDC1-223ENST00000534442 E9PSI1 815 aa7.19□□□□□ -1.26
ECHDC1-223ENST00000534442 GDF9O60383 454 aa7.19□□□□□ -1.26
ECHDC1-223ENST00000534442 PTGIRP43119 386 aa7.19□□□□□ -1.26
ECHDC1-223ENST00000534442 CENPCQ03188 943 aa7.19□□□□□ -1.26
ECHDC1-223ENST00000534442 CLN3Q13286 438 aa7.19□□□□□ -1.26
ECHDC1-223ENST00000534442 TLR1Q15399 786 aa7.19□□□□□ -1.26
ECHDC1-223ENST00000534442 COX20Q5RI15 118 aa7.19□□□□□ -1.26
ECHDC1-223ENST00000534442 C16orf46Q6P387 395 aa7.19□□□□□ -1.26
ECHDC1-223ENST00000534442 VTI1AQ96AJ9 217 aa7.19□□□□□ -1.26
ECHDC1-223ENST00000534442 PRKD2Q9BZL6 878 aa7.19□□□□□ -1.26
ECHDC1-223ENST00000534442 STK32BQ9NY57 414 aa7.19□□□□□ -1.26
ECHDC1-223ENST00000534442 CFAP65Q6ZU64 1925 aaKnown RBP7.19□□□□□ -1.26
ECHDC1-223ENST00000534442 DHX29Q7Z478 1369 aaKnown RBP7.19□□□□□ -1.26
ECHDC1-223ENST00000534442 C1orf167Q5SNV9 1468 aa7.18□□□□□ -1.26
ECHDC1-223ENST00000534442 TNFRSF10BO14763 440 aa7.18□□□□□ -1.26
ECHDC1-223ENST00000534442 ZIC2O95409 532 aaPredicted RBP7.18□□□□□ -1.26
ECHDC1-223ENST00000534442 WDR4P57081 412 aaKnown RBP7.18□□□□□ -1.26
ECHDC1-223ENST00000534442 PSMA6P60900 246 aaKnown RBP7.18□□□□□ -1.26
ECHDC1-223ENST00000534442 SH3PXD2AQ5TCZ1 1133 aa7.18□□□□□ -1.26
ECHDC1-223ENST00000534442 ZDHHC1Q8WTX9 485 aa7.18□□□□□ -1.26
ECHDC1-223ENST00000534442 DCTN4Q9UJW0 460 aa7.18□□□□□ -1.26
ECHDC1-223ENST00000534442 V9GY48 417 aaPredicted RBP7.18□□□□□ -1.26
ECHDC1-223ENST00000534442 PTPN23Q9H3S7 1636 aa7.18□□□□□ -1.26
ECHDC1-223ENST00000534442 EML1O00423 815 aa7.17□□□□□ -1.26
ECHDC1-223ENST00000534442 FAM13AO94988 1023 aa7.17□□□□□ -1.26
ECHDC1-223ENST00000534442 HSPA8P11142 646 aaKnown RBP7.17□□□□□ -1.26
ECHDC1-223ENST00000534442 TIMP2P16035 220 aa7.17□□□□□ -1.26
ECHDC1-223ENST00000534442 MPSTP25325 297 aa7.17□□□□□ -1.26
ECHDC1-223ENST00000534442 MAPK1P28482 360 aa7.17□□□□□ -1.26
ECHDC1-223ENST00000534442 TEAD4Q15561 434 aa7.17□□□□□ -1.26
ECHDC1-223ENST00000534442 ASB16Q96NS5 453 aa7.17□□□□□ -1.26
ECHDC1-223ENST00000534442 ORAI2Q96SN7 254 aa7.17□□□□□ -1.26
ECHDC1-223ENST00000534442 TOR4AQ9NXH8 423 aa7.17□□□□□ -1.26
ECHDC1-223ENST00000534442 PLA2G2EQ9NZK7 142 aa7.17□□□□□ -1.26
ECHDC1-223ENST00000534442 LRFN2Q9ULH4 789 aa7.17□□□□□ -1.26
ECHDC1-223ENST00000534442 CICQ96RK0 1608 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-223ENST00000534442 ABCA3Q99758 1704 aa7.16□□□□□ -1.26
ECHDC1-223ENST00000534442 TTC24A2A3L6 582 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-223ENST00000534442 ZNF16P17020 682 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-223ENST00000534442 SMPD1P17405 629 aa7.16□□□□□ -1.26
ECHDC1-223ENST00000534442 SLC15A2Q16348 729 aa7.16□□□□□ -1.26
ECHDC1-223ENST00000534442 FAM26DQ5JW98 314 aa7.16□□□□□ -1.26
ECHDC1-223ENST00000534442 MYO19Q96H55 970 aa7.16□□□□□ -1.26
ECHDC1-223ENST00000534442 BCL2L13Q9BXK5 485 aa7.16□□□□□ -1.26
ECHDC1-223ENST00000534442 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.16□□□□□ -1.26
ECHDC1-223ENST00000534442 TROQ12816 1431 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-223ENST00000534442 ADAMTS7Q9UKP4 1686 aa7.16□□□□□ -1.26
ECHDC1-223ENST00000534442 NRAPQ86VF7 1730 aa7.15□□□□□ -1.26
ECHDC1-223ENST00000534442 SERTM1A2A2V5 107 aa7.15□□□□□ -1.26
ECHDC1-223ENST00000534442 TNFRSF10AO00220 468 aa7.15□□□□□ -1.26
ECHDC1-223ENST00000534442 MEN1O00255 615 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms