RNA–Protein interactions for RNA: ENST00000534315.5

FOXRED1-218, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 1 (best)

Gene FOXRED1, Length 2,210 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-218ENST00000534315 CAVIN1Q6NZI2 390 aaKnown RBP16.3■□□□□ 0.2
FOXRED1-218ENST00000534315 MARCH10Q8NA82 808 aaPredicted RBP16.3■□□□□ 0.2
FOXRED1-218ENST00000534315 TTLL11Q8NHH1 800 aa16.3■□□□□ 0.2
FOXRED1-218ENST00000534315 GREM2Q9H772 168 aa16.3■□□□□ 0.2
FOXRED1-218ENST00000534315 TPCN1Q9ULQ1 816 aa16.3■□□□□ 0.2
FOXRED1-218ENST00000534315 SPEF2Q9C093 1822 aa16.3■□□□□ 0.2
FOXRED1-218ENST00000534315 ERVV-1B6SEH8 477 aa16.3■□□□□ 0.2
FOXRED1-218ENST00000534315 RPS6KB1P23443 525 aa16.3■□□□□ 0.2
FOXRED1-218ENST00000534315 CTSWP56202 376 aa16.3■□□□□ 0.2
FOXRED1-218ENST00000534315 TRMT112Q9UI30 125 aaKnown RBP16.3■□□□□ 0.2
FOXRED1-218ENST00000534315 AKAP2Q9Y2D5 859 aa16.3■□□□□ 0.2
FOXRED1-218ENST00000534315 U3KPZ7 1027 aaPredicted RBP16.3■□□□□ 0.2
FOXRED1-218ENST00000534315 SPATA31A5Q5VU36 1347 aa16.29■□□□□ 0.2
FOXRED1-218ENST00000534315 SPATA31A7Q8IWB4 1347 aa16.29■□□□□ 0.2
FOXRED1-218ENST00000534315 RIC1Q4ADV7 1423 aa16.29■□□□□ 0.2
FOXRED1-218ENST00000534315 IRS4O14654 1257 aaPredicted RBP16.29■□□□□ 0.2
FOXRED1-218ENST00000534315 DTNBO60941 627 aa16.29■□□□□ 0.2
FOXRED1-218ENST00000534315 ITGA6P23229 1130 aa16.29■□□□□ 0.2
FOXRED1-218ENST00000534315 FOXD4L6Q3SYB3 417 aaPredicted RBP16.29■□□□□ 0.2
FOXRED1-218ENST00000534315 FOXD4L3Q6VB84 417 aaPredicted RBP16.29■□□□□ 0.2
FOXRED1-218ENST00000534315 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.29■□□□□ 0.2
FOXRED1-218ENST00000534315 XAGE2Q96GT9 111 aa16.29■□□□□ 0.2
FOXRED1-218ENST00000534315 UBN2Q6ZU65 1347 aa16.29■□□□□ 0.2
FOXRED1-218ENST00000534315 SYT1P21579 422 aa16.29■□□□□ 0.2
FOXRED1-218ENST00000534315 ZMYM1Q5SVZ6 1142 aa16.29■□□□□ 0.2
FOXRED1-218ENST00000534315 NECAB1Q8N987 351 aa16.29■□□□□ 0.2
FOXRED1-218ENST00000534315 HELLSQ9NRZ9 838 aa16.29■□□□□ 0.2
FOXRED1-218ENST00000534315 STX6O43752 255 aa16.28■□□□□ 0.2
FOXRED1-218ENST00000534315 GJB2P29033 226 aa16.28■□□□□ 0.2
FOXRED1-218ENST00000534315 TTC39AQ5SRH9 613 aa16.28■□□□□ 0.2
FOXRED1-218ENST00000534315 GORABQ5T7V8 394 aa16.28■□□□□ 0.2
FOXRED1-218ENST00000534315 TCHHQ07283 1943 aa16.28■□□□□ 0.2
FOXRED1-218ENST00000534315 ZSCAN22P10073 491 aaPredicted RBP16.27■□□□□ 0.2
FOXRED1-218ENST00000534315 EIF5P55010 431 aaKnown RBP16.27■□□□□ 0.2
FOXRED1-218ENST00000534315 PIP4K2BP78356 416 aa16.27■□□□□ 0.2
FOXRED1-218ENST00000534315 TOB2Q14106 344 aaPredicted RBP16.27■□□□□ 0.2
FOXRED1-218ENST00000534315 KRT32Q14532 448 aa16.27■□□□□ 0.2
FOXRED1-218ENST00000534315 CCDC158Q5M9N0 1113 aa16.27■□□□□ 0.2
FOXRED1-218ENST00000534315 INTS5Q6P9B9 1019 aaKnown RBP16.27■□□□□ 0.2
FOXRED1-218ENST00000534315 TICAM2Q86XR7 235 aa16.27■□□□□ 0.2
FOXRED1-218ENST00000534315 ALDH8A1Q9H2A2 487 aaPredicted RBP16.27■□□□□ 0.2
FOXRED1-218ENST00000534315 RIPOR2Q9Y4F9 1068 aa16.27■□□□□ 0.2
FOXRED1-218ENST00000534315 NWD2Q9ULI1 1742 aa16.27■□□□□ 0.2
FOXRED1-218ENST00000534315 ANKRD18BA2A2Z9 1011 aa16.27■□□□□ 0.19
FOXRED1-218ENST00000534315 CYP21A2P08686 494 aa16.27■□□□□ 0.19
FOXRED1-218ENST00000534315 PRKCSHP14314 528 aaPredicted RBP16.27■□□□□ 0.19
FOXRED1-218ENST00000534315 ATP6V1AP38606 617 aa16.27■□□□□ 0.19
FOXRED1-218ENST00000534315 FKBP4Q02790 459 aaKnown RBP eCLIP16.27■□□□□ 0.19
FOXRED1-218ENST00000534315 ANKRD1Q15327 319 aa16.27■□□□□ 0.19
FOXRED1-218ENST00000534315 ZSCAN23Q3MJ62 389 aa16.27■□□□□ 0.19
FOXRED1-218ENST00000534315 METTL24Q5JXM2 366 aa16.27■□□□□ 0.19
FOXRED1-218ENST00000534315 LDHAL6AQ6ZMR3 332 aa16.27■□□□□ 0.19
FOXRED1-218ENST00000534315 ZNF34Q8IZ26 560 aa16.27■□□□□ 0.19
FOXRED1-218ENST00000534315 CCDC87Q9NVE4 849 aa16.27■□□□□ 0.19
FOXRED1-218ENST00000534315 RBM27Q9P2N5 1060 aaKnown RBP16.27■□□□□ 0.19
FOXRED1-218ENST00000534315 NSFL1CQ9UNZ2 370 aaKnown RBP16.27■□□□□ 0.19
FOXRED1-218ENST00000534315 SLIT2O94813 1529 aa16.27■□□□□ 0.19
FOXRED1-218ENST00000534315 RNF113AO15541 343 aaKnown RBP16.26■□□□□ 0.19
FOXRED1-218ENST00000534315 LOC102724428A0A0B4J2F2 783 aa16.26■□□□□ 0.19
FOXRED1-218ENST00000534315 PDE8AO60658 829 aa16.26■□□□□ 0.19
FOXRED1-218ENST00000534315 CRKLP46109 303 aaKnown RBP16.26■□□□□ 0.19
FOXRED1-218ENST00000534315 SIK1P57059 783 aa16.26■□□□□ 0.19
FOXRED1-218ENST00000534315 SCARF1Q14162 830 aa16.26■□□□□ 0.19
FOXRED1-218ENST00000534315 GDPD2Q9HCC8 539 aa16.26■□□□□ 0.19
FOXRED1-218ENST00000534315 MAST3O60307 1309 aa16.26■□□□□ 0.19
FOXRED1-218ENST00000534315 ZNF445P59923 1031 aa16.25■□□□□ 0.19
FOXRED1-218ENST00000534315 ATP2B3Q16720 1220 aa16.25■□□□□ 0.19
FOXRED1-218ENST00000534315 NEK1Q96PY6 1258 aa16.25■□□□□ 0.19
FOXRED1-218ENST00000534315 CNNM1Q9NRU3 951 aa16.25■□□□□ 0.19
FOXRED1-218ENST00000534315 F13A1P00488 732 aa16.25■□□□□ 0.19
FOXRED1-218ENST00000534315 ITPK1Q13572 414 aa16.25■□□□□ 0.19
FOXRED1-218ENST00000534315 BARGINQ6ZT62 677 aa16.25■□□□□ 0.19
FOXRED1-218ENST00000534315 DSCC1Q9BVC3 393 aa16.25■□□□□ 0.19
FOXRED1-218ENST00000534315 RTN4Q9NQC3 1192 aaKnown RBP16.25■□□□□ 0.19
FOXRED1-218ENST00000534315 MYH14Q7Z406 1995 aaKnown RBP16.24■□□□□ 0.19
FOXRED1-218ENST00000534315 MBD3O95983 291 aa16.24■□□□□ 0.19
FOXRED1-218ENST00000534315 STOX1Q6ZVD7 989 aa16.24■□□□□ 0.19
FOXRED1-218ENST00000534315 TMEM63CQ9P1W3 806 aa16.24■□□□□ 0.19
FOXRED1-218ENST00000534315 RREB1Q92766 1687 aa16.24■□□□□ 0.19
FOXRED1-218ENST00000534315 M0R2C6 588 aa16.23■□□□□ 0.19
FOXRED1-218ENST00000534315 HSPD1P10809 573 aaKnown RBP16.23■□□□□ 0.19
FOXRED1-218ENST00000534315 VGLL2Q8N8G2 317 aa16.23■□□□□ 0.19
FOXRED1-218ENST00000534315 MTMR6Q9Y217 621 aa16.23■□□□□ 0.19
FOXRED1-218ENST00000534315 LAMA4Q16363 1823 aa16.23■□□□□ 0.19
FOXRED1-218ENST00000534315 ZAP70P43403 619 aa16.23■□□□□ 0.19
FOXRED1-218ENST00000534315 PI16Q6UXB8 463 aa16.23■□□□□ 0.19
FOXRED1-218ENST00000534315 USP48Q86UV5 1035 aa16.23■□□□□ 0.19
FOXRED1-218ENST00000534315 OSBP2Q969R2 916 aa16.23■□□□□ 0.19
FOXRED1-218ENST00000534315 TOM1O60784 492 aa16.22■□□□□ 0.19
FOXRED1-218ENST00000534315 SUSD4Q5VX71 490 aa16.22■□□□□ 0.19
FOXRED1-218ENST00000534315 CICQ96RK0 1608 aaPredicted RBP16.22■□□□□ 0.19
FOXRED1-218ENST00000534315 LRP5O75197 1615 aa16.22■□□□□ 0.19
FOXRED1-218ENST00000534315 ABCC12Q96J65 1359 aa16.22■□□□□ 0.19
FOXRED1-218ENST00000534315 A0A0G2JLW4 131 aa16.22■□□□□ 0.19
FOXRED1-218ENST00000534315 FAM177BA6PVY3 158 aa16.22■□□□□ 0.19
FOXRED1-218ENST00000534315 GADD45BO75293 160 aaPredicted RBP16.22■□□□□ 0.19
FOXRED1-218ENST00000534315 CAMTA2O94983 1202 aa16.22■□□□□ 0.19
FOXRED1-218ENST00000534315 STK3Q13188 491 aa16.22■□□□□ 0.19
FOXRED1-218ENST00000534315 Q6ZUG5 572 aa16.22■□□□□ 0.19
FOXRED1-218ENST00000534315 CNPY2Q9Y2B0 182 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms