RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 PSMD14O00487 310 aa11.41□□□□□ -0.58
COPB1-211ENST00000534234 ECE2O60344 883 aa11.41□□□□□ -0.58
COPB1-211ENST00000534234 UFL1O94874 794 aa11.41□□□□□ -0.58
COPB1-211ENST00000534234 HIRAP54198 1017 aaPredicted RBP11.41□□□□□ -0.58
COPB1-211ENST00000534234 EXOSC9Q06265 439 aaKnown RBP11.41□□□□□ -0.58
COPB1-211ENST00000534234 FLIIQ13045 1269 aa11.41□□□□□ -0.58
COPB1-211ENST00000534234 DCAF8Q5TAQ9 597 aa11.41□□□□□ -0.58
COPB1-211ENST00000534234 ANKRD18AQ8IVF6 992 aa11.41□□□□□ -0.58
COPB1-211ENST00000534234 TTLL11Q8NHH1 800 aa11.41□□□□□ -0.58
COPB1-211ENST00000534234 ZC3H15Q8WU90 426 aaKnown RBP11.41□□□□□ -0.58
COPB1-211ENST00000534234 DPF2Q92785 391 aa11.41□□□□□ -0.58
COPB1-211ENST00000534234 PGAP2Q9UHJ9 254 aa11.41□□□□□ -0.58
COPB1-211ENST00000534234 GGA1Q9UJY5 639 aa11.41□□□□□ -0.58
COPB1-211ENST00000534234 SHTN1A0MZ66 631 aa11.4□□□□□ -0.58
COPB1-211ENST00000534234 H7C1W4 665 aa11.4□□□□□ -0.58
COPB1-211ENST00000534234 HOXD11P31277 338 aaPredicted RBP11.4□□□□□ -0.58
COPB1-211ENST00000534234 CTSWP56202 376 aa11.4□□□□□ -0.58
COPB1-211ENST00000534234 FKBP5Q13451 457 aaPredicted RBP11.4□□□□□ -0.58
COPB1-211ENST00000534234 CST9Q5W186 159 aa11.4□□□□□ -0.58
COPB1-211ENST00000534234 MICALL2Q8IY33 904 aa11.4□□□□□ -0.58
COPB1-211ENST00000534234 CDC5LQ99459 802 aaKnown RBP11.4□□□□□ -0.58
COPB1-211ENST00000534234 RNF216Q9NWF9 866 aaPredicted RBP11.4□□□□□ -0.58
COPB1-211ENST00000534234 LTBP1Q14766 1721 aa11.39□□□□□ -0.59
COPB1-211ENST00000534234 GCKRQ14397 625 aa11.39□□□□□ -0.59
COPB1-211ENST00000534234 SAMD7Q7Z3H4 446 aa11.39□□□□□ -0.59
COPB1-211ENST00000534234 UBE3BQ7Z3V4 1068 aa11.39□□□□□ -0.59
COPB1-211ENST00000534234 TRPM4Q8TD43 1214 aa11.39□□□□□ -0.59
COPB1-211ENST00000534234 DNAAF4Q8WXU2 420 aa11.39□□□□□ -0.59
COPB1-211ENST00000534234 GLIS2Q9BZE0 524 aaPredicted RBP11.39□□□□□ -0.59
COPB1-211ENST00000534234 SPINK5Q9NQ38 1064 aaPredicted RBP11.39□□□□□ -0.59
COPB1-211ENST00000534234 ADAMTSL1Q8N6G6 1762 aa11.39□□□□□ -0.59
COPB1-211ENST00000534234 DUOX1Q9NRD9 1551 aa11.38□□□□□ -0.59
COPB1-211ENST00000534234 RPS12P25398 132 aaKnown RBP11.38□□□□□ -0.59
COPB1-211ENST00000534234 CDC37L1Q7L3B6 337 aa11.38□□□□□ -0.59
COPB1-211ENST00000534234 GREM2Q9H772 168 aa11.38□□□□□ -0.59
COPB1-211ENST00000534234 BSDC1Q9NW68 430 aaPredicted RBP11.38□□□□□ -0.59
COPB1-211ENST00000534234 XDHP47989 1333 aa11.38□□□□□ -0.59
COPB1-211ENST00000534234 LAMB2P55268 1798 aa11.38□□□□□ -0.59
COPB1-211ENST00000534234 COL4A1P02462 1669 aa11.38□□□□□ -0.59
COPB1-211ENST00000534234 DDX60Q8IY21 1712 aaKnown RBP11.37□□□□□ -0.59
COPB1-211ENST00000534234 VIL1P09327 827 aaKnown RBP11.37□□□□□ -0.59
COPB1-211ENST00000534234 ATP2B4P23634 1241 aa11.37□□□□□ -0.59
COPB1-211ENST00000534234 RBM26Q5T8P6 1007 aaKnown RBP11.37□□□□□ -0.59
COPB1-211ENST00000534234 TNS4Q8IZW8 715 aa11.37□□□□□ -0.59
COPB1-211ENST00000534234 LINS1Q8NG48 757 aa11.37□□□□□ -0.59
COPB1-211ENST00000534234 MYH16Q9H6N6 1097 aa11.37□□□□□ -0.59
COPB1-211ENST00000534234 MINPP1Q9UNW1 487 aa11.37□□□□□ -0.59
COPB1-211ENST00000534234 WDR33Q9C0J8 1336 aaKnown RBP11.37□□□□□ -0.59
COPB1-211ENST00000534234 RTL9Q8NET4 1388 aa11.37□□□□□ -0.59
COPB1-211ENST00000534234 WTIPA6NIX2 430 aaPredicted RBP11.37□□□□□ -0.59
COPB1-211ENST00000534234 FOXN1O15353 648 aa11.37□□□□□ -0.59
COPB1-211ENST00000534234 CELF2O95319 508 aaKnown RBP11.37□□□□□ -0.59
COPB1-211ENST00000534234 TBC1D10BQ4KMP7 808 aaPredicted RBP11.37□□□□□ -0.59
COPB1-211ENST00000534234 PAXIP1Q6ZW49 1069 aaPredicted RBP11.37□□□□□ -0.59
COPB1-211ENST00000534234 USP48Q86UV5 1035 aa11.37□□□□□ -0.59
COPB1-211ENST00000534234 AIDAQ96BJ3 306 aa11.37□□□□□ -0.59
COPB1-211ENST00000534234 WBP1LQ9NX94 342 aa11.37□□□□□ -0.59
COPB1-211ENST00000534234 TLL2Q9Y6L7 1015 aa11.37□□□□□ -0.59
COPB1-211ENST00000534234 EGFRP00533 1210 aa11.36□□□□□ -0.59
COPB1-211ENST00000534234 ECE1P42892 770 aa11.36□□□□□ -0.59
COPB1-211ENST00000534234 CASP7P55210 303 aa11.36□□□□□ -0.59
COPB1-211ENST00000534234 GRM1Q13255 1194 aa11.36□□□□□ -0.59
COPB1-211ENST00000534234 PODNQ7Z5L7 613 aa11.36□□□□□ -0.59
COPB1-211ENST00000534234 CAPNS2Q96L46 248 aa11.36□□□□□ -0.59
COPB1-211ENST00000534234 PLA2G12BQ9BX93 195 aa11.36□□□□□ -0.59
COPB1-211ENST00000534234 TAF1P21675 1872 aa11.36□□□□□ -0.59
COPB1-211ENST00000534234 PCNTO95613 3336 aa11.35□□□□□ -0.59
COPB1-211ENST00000534234 F6X3S4 739 aa11.35□□□□□ -0.59
COPB1-211ENST00000534234 CSF1RP07333 972 aa11.35□□□□□ -0.59
COPB1-211ENST00000534234 ITGA6P23229 1130 aa11.35□□□□□ -0.59
COPB1-211ENST00000534234 IGHMBP2P38935 993 aaKnown RBP11.35□□□□□ -0.59
COPB1-211ENST00000534234 CYP4F22Q6NT55 531 aa11.35□□□□□ -0.59
COPB1-211ENST00000534234 SAPCD2Q86UD0 394 aa11.35□□□□□ -0.59
COPB1-211ENST00000534234 ZNF408Q9H9D4 720 aa11.35□□□□□ -0.59
COPB1-211ENST00000534234 LRRC37AA6NMS7 1700 aa11.34□□□□□ -0.59
COPB1-211ENST00000534234 CTCFP49711 727 aaPredicted RBP11.34□□□□□ -0.59
COPB1-211ENST00000534234 CCT4P50991 539 aaKnown RBP11.34□□□□□ -0.59
COPB1-211ENST00000534234 MAP2K1Q02750 393 aaPredicted RBP11.34□□□□□ -0.59
COPB1-211ENST00000534234 BEND3Q5T5X7 828 aa11.34□□□□□ -0.59
COPB1-211ENST00000534234 RSBN1LQ6PCB5 846 aaPredicted RBP11.34□□□□□ -0.59
COPB1-211ENST00000534234 DLK2Q6UY11 383 aa11.34□□□□□ -0.59
COPB1-211ENST00000534234 KRT26Q7Z3Y9 468 aa11.34□□□□□ -0.59
COPB1-211ENST00000534234 AGBL3Q8NEM8 1001 aa11.34□□□□□ -0.59
COPB1-211ENST00000534234 DCPSQ96C86 337 aaKnown RBP11.34□□□□□ -0.59
COPB1-211ENST00000534234 MPHOSPH8Q99549 860 aa11.34□□□□□ -0.59
COPB1-211ENST00000534234 USP17L3A6NCW0 530 aa11.33□□□□□ -0.6
COPB1-211ENST00000534234 USP17L4A6NCW7 530 aa11.33□□□□□ -0.6
COPB1-211ENST00000534234 FAM161AQ3B820 660 aa11.33□□□□□ -0.6
COPB1-211ENST00000534234 USP17L1Q7RTZ2 530 aa11.33□□□□□ -0.6
COPB1-211ENST00000534234 ANKRD2Q9GZV1 360 aa11.33□□□□□ -0.6
COPB1-211ENST00000534234 LEMD3Q9Y2U8 911 aa11.33□□□□□ -0.6
COPB1-211ENST00000534234 ZNF280AP59817 542 aaPredicted RBP11.33□□□□□ -0.6
COPB1-211ENST00000534234 KIF4BQ2VIQ3 1234 aa11.33□□□□□ -0.6
COPB1-211ENST00000534234 HHIPL1Q96JK4 782 aa11.33□□□□□ -0.6
COPB1-211ENST00000534234 GMLQ99445 158 aa11.33□□□□□ -0.6
COPB1-211ENST00000534234 PRDM10Q9NQV6 1147 aa11.33□□□□□ -0.6
COPB1-211ENST00000534234 ANKRD18BA2A2Z9 1011 aa11.32□□□□□ -0.6
COPB1-211ENST00000534234 CAPN15O75808 1086 aa11.32□□□□□ -0.6
COPB1-211ENST00000534234 USP17L8P0C7I0 530 aa11.32□□□□□ -0.6
COPB1-211ENST00000534234 MAP2K2P36507 400 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms