RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 BCRP11274 1271 aa5.65□□□□□ -1.51
CSMD3-210ENST00000534172 BCL2L13Q9BXK5 485 aa5.65□□□□□ -1.51
CSMD3-210ENST00000534172 ZFATQ9P243 1243 aa5.65□□□□□ -1.51
CSMD3-210ENST00000534172 TRAK1Q9UPV9 953 aa5.65□□□□□ -1.51
CSMD3-210ENST00000534172 LOC102724428A0A0B4J2F2 783 aa5.64□□□□□ -1.51
CSMD3-210ENST00000534172 EIF4EBP3O60516 100 aaPredicted RBP5.64□□□□□ -1.51
CSMD3-210ENST00000534172 IGSF3O75054 1194 aa5.64□□□□□ -1.51
CSMD3-210ENST00000534172 GMPRP36959 345 aa5.64□□□□□ -1.51
CSMD3-210ENST00000534172 MAPK8P45983 427 aa5.64□□□□□ -1.51
CSMD3-210ENST00000534172 SIK1P57059 783 aa5.64□□□□□ -1.51
CSMD3-210ENST00000534172 NLRP2Q9NX02 1062 aa5.64□□□□□ -1.51
CSMD3-210ENST00000534172 DNAJB12Q9NXW2 375 aaKnown RBP5.64□□□□□ -1.51
CSMD3-210ENST00000534172 SALL4Q9UJQ4 1053 aa5.64□□□□□ -1.51
CSMD3-210ENST00000534172 GGA1Q9UJY5 639 aa5.64□□□□□ -1.51
CSMD3-210ENST00000534172 PNMA6FA0A0J9YX94 578 aa5.64□□□□□ -1.51
CSMD3-210ENST00000534172 RBM47A0AV96 593 aaKnown RBP5.64□□□□□ -1.51
CSMD3-210ENST00000534172 LDHBP07195 334 aaKnown RBP5.64□□□□□ -1.51
CSMD3-210ENST00000534172 NCAPG2Q86XI2 1143 aa5.64□□□□□ -1.51
CSMD3-210ENST00000534172 MICALL1Q8N3F8 863 aa5.64□□□□□ -1.51
CSMD3-210ENST00000534172 C1orf127Q8N9H9 656 aa5.64□□□□□ -1.51
CSMD3-210ENST00000534172 SRCIN1Q9C0H9 1055 aa5.64□□□□□ -1.51
CSMD3-210ENST00000534172 SLC6A14Q9UN76 642 aa5.64□□□□□ -1.51
CSMD3-210ENST00000534172 SPG7Q9UQ90 795 aa5.64□□□□□ -1.51
CSMD3-210ENST00000534172 TTBK1Q5TCY1 1321 aaPredicted RBP5.63□□□□□ -1.51
CSMD3-210ENST00000534172 LOC105371045A0A1W2PR82 267 aa5.63□□□□□ -1.51
CSMD3-210ENST00000534172 FAM177BA6PVY3 158 aa5.63□□□□□ -1.51
CSMD3-210ENST00000534172 P4HBP07237 508 aaKnown RBP5.63□□□□□ -1.51
CSMD3-210ENST00000534172 ADH7P40394 386 aa5.63□□□□□ -1.51
CSMD3-210ENST00000534172 RNFT1Q5M7Z0 435 aa5.63□□□□□ -1.51
CSMD3-210ENST00000534172 KIAA0319Q5VV43 1072 aa5.63□□□□□ -1.51
CSMD3-210ENST00000534172 CHRDQ9H2X0 955 aa5.63□□□□□ -1.51
CSMD3-210ENST00000534172 CNTN3Q9P232 1028 aa5.63□□□□□ -1.51
CSMD3-210ENST00000534172 FOXD3Q9UJU5 478 aaPredicted RBP5.63□□□□□ -1.51
CSMD3-210ENST00000534172 NEURL1BA8MQ27 555 aa5.63□□□□□ -1.51
CSMD3-210ENST00000534172 OIP5O43482 229 aa5.63□□□□□ -1.51
CSMD3-210ENST00000534172 WIPF1O43516 503 aa5.63□□□□□ -1.51
CSMD3-210ENST00000534172 EPXP11678 715 aa5.63□□□□□ -1.51
CSMD3-210ENST00000534172 PCBP4P57723 403 aaKnown RBP5.63□□□□□ -1.51
CSMD3-210ENST00000534172 HCN2Q9UL51 889 aa5.63□□□□□ -1.51
CSMD3-210ENST00000534172 A6NHS1 94 aa5.62□□□□□ -1.51
CSMD3-210ENST00000534172 SMNDC1O75940 238 aaKnown RBP eCLIP5.62□□□□□ -1.51
CSMD3-210ENST00000534172 XPCQ01831 940 aaPredicted RBP5.62□□□□□ -1.51
CSMD3-210ENST00000534172 FBXO33Q7Z6M2 555 aa5.62□□□□□ -1.51
CSMD3-210ENST00000534172 EDARADDQ8WWZ3 215 aa5.62□□□□□ -1.51
CSMD3-210ENST00000534172 ACDQ96AP0 544 aa5.62□□□□□ -1.51
CSMD3-210ENST00000534172 CCDC74AQ96AQ1 378 aa5.62□□□□□ -1.51
CSMD3-210ENST00000534172 ELMSAN1Q6PJG2 1045 aa5.62□□□□□ -1.51
CSMD3-210ENST00000534172 DCAF11Q8TEB1 546 aa5.62□□□□□ -1.51
CSMD3-210ENST00000534172 MDFIQ99750 246 aa5.62□□□□□ -1.51
CSMD3-210ENST00000534172 INSM1Q01101 510 aaPredicted RBP5.61□□□□□ -1.51
CSMD3-210ENST00000534172 KRT76Q01546 638 aa5.61□□□□□ -1.51
CSMD3-210ENST00000534172 TBC1D8BQ0IIM8 1120 aa5.61□□□□□ -1.51
CSMD3-210ENST00000534172 ORC1Q13415 861 aa5.61□□□□□ -1.51
CSMD3-210ENST00000534172 RAB44Q7Z6P3 723 aaPredicted RBP5.61□□□□□ -1.51
CSMD3-210ENST00000534172 FAM35AQ86V20 835 aa5.61□□□□□ -1.51
CSMD3-210ENST00000534172 MUC3BQ9H195 1237 aa5.61□□□□□ -1.51
CSMD3-210ENST00000534172 IGFLR1Q9H665 355 aa5.61□□□□□ -1.51
CSMD3-210ENST00000534172 PRDM6Q9NQX0 595 aa5.61□□□□□ -1.51
CSMD3-210ENST00000534172 KLF15Q9UIH9 416 aa5.61□□□□□ -1.51
CSMD3-210ENST00000534172 EREGO14944 169 aa5.6□□□□□ -1.51
CSMD3-210ENST00000534172 XRCC5P13010 732 aaKnown RBP5.6□□□□□ -1.51
CSMD3-210ENST00000534172 GRIN2CQ14957 1233 aa5.6□□□□□ -1.51
CSMD3-210ENST00000534172 FCHSD1Q86WN1 690 aa5.6□□□□□ -1.51
CSMD3-210ENST00000534172 SUV39H2Q9H5I1 410 aa5.6□□□□□ -1.51
CSMD3-210ENST00000534172 GADD45BO75293 160 aaPredicted RBP5.6□□□□□ -1.51
CSMD3-210ENST00000534172 CELA2BP08218 269 aaPredicted RBP5.6□□□□□ -1.51
CSMD3-210ENST00000534172 EIF2AK2P19525 551 aaKnown RBP5.6□□□□□ -1.51
CSMD3-210ENST00000534172 CEP120Q8N960 986 aa5.6□□□□□ -1.51
CSMD3-210ENST00000534172 TMEM102Q8N9M5 508 aaPredicted RBP5.6□□□□□ -1.51
CSMD3-210ENST00000534172 GALNT6Q8NCL4 622 aa5.6□□□□□ -1.51
CSMD3-210ENST00000534172 RGS9O75916 674 aaPredicted RBP5.59□□□□□ -1.51
CSMD3-210ENST00000534172 GNA15P30679 374 aa5.59□□□□□ -1.51
CSMD3-210ENST00000534172 PTPN12Q05209 780 aaKnown RBP5.59□□□□□ -1.51
CSMD3-210ENST00000534172 GIPC2Q8TF65 315 aa5.59□□□□□ -1.51
CSMD3-210ENST00000534172 BTBD6Q96KE9 485 aa5.59□□□□□ -1.51
CSMD3-210ENST00000534172 PBX4Q9BYU1 374 aa5.59□□□□□ -1.51
CSMD3-210ENST00000534172 EHD4Q9H223 541 aa5.59□□□□□ -1.51
CSMD3-210ENST00000534172 MRS2Q9HD23 443 aa5.59□□□□□ -1.51
CSMD3-210ENST00000534172 SPDYE3A6NKU9 549 aa5.58□□□□□ -1.52
CSMD3-210ENST00000534172 ZBTB42B2RXF5 422 aa5.58□□□□□ -1.52
CSMD3-210ENST00000534172 CYP2E1P05181 493 aaPredicted RBP5.58□□□□□ -1.52
CSMD3-210ENST00000534172 PTPRAP18433 802 aa5.58□□□□□ -1.52
CSMD3-210ENST00000534172 VAMP1P23763 118 aa5.58□□□□□ -1.52
CSMD3-210ENST00000534172 PRPF40BQ6NWY9 871 aaKnown RBP5.58□□□□□ -1.52
CSMD3-210ENST00000534172 NSUN5Q96P11 429 aaKnown RBP5.58□□□□□ -1.52
CSMD3-210ENST00000534172 OSMRQ99650 979 aa5.58□□□□□ -1.52
CSMD3-210ENST00000534172 SRA1Q9HD15 236 aaKnown RBP5.58□□□□□ -1.52
CSMD3-210ENST00000534172 CECR2Q9BXF3 1484 aa5.58□□□□□ -1.52
CSMD3-210ENST00000534172 RB1CC1Q8TDY2 1594 aa5.58□□□□□ -1.52
CSMD3-210ENST00000534172 FAM181BA6NEQ2 426 aa5.58□□□□□ -1.52
CSMD3-210ENST00000534172 CPB1P15086 417 aa5.58□□□□□ -1.52
CSMD3-210ENST00000534172 AMPD1P23109 780 aa5.58□□□□□ -1.52
CSMD3-210ENST00000534172 EIF4BP23588 611 aaKnown RBP5.58□□□□□ -1.52
CSMD3-210ENST00000534172 DAB2P98082 770 aa5.58□□□□□ -1.52
CSMD3-210ENST00000534172 PSMD2Q13200 908 aa5.58□□□□□ -1.52
CSMD3-210ENST00000534172 CHSY3Q70JA7 882 aa5.58□□□□□ -1.52
CSMD3-210ENST00000534172 TMC4Q7Z404 712 aa5.58□□□□□ -1.52
CSMD3-210ENST00000534172 PLD4Q96BZ4 506 aa5.58□□□□□ -1.52
CSMD3-210ENST00000534172 BHLHE41Q9C0J9 482 aaPredicted RBP5.58□□□□□ -1.52
CSMD3-210ENST00000534172 LIN7BQ9HAP6 207 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms